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(-) Description

Title :  CRYSTAL STRUCTURE OF Y305F MUTANT OF THE COPPER AMINE OXIDASE FROM HANSENULA POLYMORPHA EXPRESSED IN YEAST
 
Authors :  Z. Chen, S. Datta, J. L. Dubois, J. P. Klinman, F. S. Mathews
Date :  03 Jun 10  (Deposition) - 25 Aug 10  (Release) - 08 Sep 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  A,B,C,D,E,F  (1x)
Keywords :  Amine Oxidase, Quinoprotein, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Z. W. Chen, S. Datta, J. L. Dubois, J. P. Klinman, F. S. Mathews
Mutation At A Strictly Conserved, Active Site Tyrosine In The Copper Amine Oxidase Leads To Uncontrolled Oxygenase Activity.
Biochemistry V. 49 7393 2010
PubMed-ID: 20684524  |  Reference-DOI: 10.1021/BI100643Y
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PEROXISOMAL PRIMARY AMINE OXIDASE
    Chains: A, B, C, D, E, F
    EC Number: 1.4.3.21
    Engineered: YES
    Expression System: SACCHAROMYCES CEREVISIAE
    Expression System Plasmid: PET11A
    Expression System Taxid: 4932
    Expression System Vector Type: PLASMID
    Gene: AMO
    Mutation: YES
    Organism Common: YEAST
    Organism Scientific: PICHIA ANGUSTA
    Organism Taxid: 4905
    Synonym: COPPER AMINE OXIDASE, METHYLAMINE OXIDASE

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   CD  
Biological Unit 3 (1x):     EF
Biological Unit 4 (1x): ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 42)

Asymmetric Unit (5, 42)
No.NameCountTypeFull Name
1CU6Ligand/IonCOPPER (II) ION
2ME06Mod. Amino AcidHYDROXY-L-METHIONINE
3PO418Ligand/IonPHOSPHATE ION
4TY86Mod. Amino Acid2,4-BIS(HYDROPEROXY)-5-HYDROXY-L-PHENYLALANINE
5TY96Mod. Residue3,4-BIS(HYDROPEROXY)-5-HYDROXY-L-PHENYLALANINE
Biological Unit 1 (4, 12)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2ME02Mod. Amino AcidHYDROXY-L-METHIONINE
3PO46Ligand/IonPHOSPHATE ION
4TY82Mod. Amino Acid2,4-BIS(HYDROPEROXY)-5-HYDROXY-L-PHENYLALANINE
5TY92Mod. Residue3,4-BIS(HYDROPEROXY)-5-HYDROXY-L-PHENYLALANINE
Biological Unit 2 (4, 12)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2ME02Mod. Amino AcidHYDROXY-L-METHIONINE
3PO46Ligand/IonPHOSPHATE ION
4TY82Mod. Amino Acid2,4-BIS(HYDROPEROXY)-5-HYDROXY-L-PHENYLALANINE
5TY92Mod. Residue3,4-BIS(HYDROPEROXY)-5-HYDROXY-L-PHENYLALANINE
Biological Unit 3 (4, 12)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2ME02Mod. Amino AcidHYDROXY-L-METHIONINE
3PO46Ligand/IonPHOSPHATE ION
4TY82Mod. Amino Acid2,4-BIS(HYDROPEROXY)-5-HYDROXY-L-PHENYLALANINE
5TY92Mod. Residue3,4-BIS(HYDROPEROXY)-5-HYDROXY-L-PHENYLALANINE
Biological Unit 4 (4, 36)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2ME06Mod. Amino AcidHYDROXY-L-METHIONINE
3PO418Ligand/IonPHOSPHATE ION
4TY86Mod. Amino Acid2,4-BIS(HYDROPEROXY)-5-HYDROXY-L-PHENYLALANINE
5TY96Mod. Residue3,4-BIS(HYDROPEROXY)-5-HYDROXY-L-PHENYLALANINE

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETY8 A:405 , HIS A:456 , HIS A:458 , HIS A:624BINDING SITE FOR RESIDUE CU A 701
02AC2SOFTWAREPRO A:209 , ASN A:210 , ARG A:211 , HOH A:1250 , HOH A:1373BINDING SITE FOR RESIDUE PO4 A 702
03AC3SOFTWAREHIS A:218 , LYS A:219BINDING SITE FOR RESIDUE PO4 A 703
04AC4SOFTWAREGLY A:594 , VAL A:595 , ARG A:596 , HOH A:1324 , HOH A:1393BINDING SITE FOR RESIDUE PO4 A 704
05AC5SOFTWARETY8 B:405 , HIS B:456 , HIS B:458 , HIS B:624BINDING SITE FOR RESIDUE CU B 701
06AC6SOFTWAREPRO B:209 , ASN B:210 , ARG B:211 , HOH B:1250 , HOH B:1373BINDING SITE FOR RESIDUE PO4 B 702
07AC7SOFTWAREHIS B:218 , LYS B:219BINDING SITE FOR RESIDUE PO4 B 703
08AC8SOFTWAREGLY B:594 , VAL B:595 , ARG B:596 , HOH B:1324 , HOH B:1393BINDING SITE FOR RESIDUE PO4 B 704
09AC9SOFTWARETY8 C:405 , HIS C:456 , HIS C:458 , HIS C:624BINDING SITE FOR RESIDUE CU C 701
10BC1SOFTWAREPRO C:209 , ASN C:210 , ARG C:211 , HOH C:1250 , HOH C:1373BINDING SITE FOR RESIDUE PO4 C 702
11BC2SOFTWAREHIS C:218 , LYS C:219BINDING SITE FOR RESIDUE PO4 C 703
12BC3SOFTWAREGLY C:594 , VAL C:595 , ARG C:596 , HOH C:1324 , HOH C:1393BINDING SITE FOR RESIDUE PO4 C 704
13BC4SOFTWARETY8 D:405 , HIS D:456 , HIS D:458 , HIS D:624BINDING SITE FOR RESIDUE CU D 701
14BC5SOFTWAREPRO D:209 , ASN D:210 , ARG D:211 , HOH D:1250 , HOH D:1373BINDING SITE FOR RESIDUE PO4 D 702
15BC6SOFTWAREHIS D:218 , LYS D:219BINDING SITE FOR RESIDUE PO4 D 703
16BC7SOFTWAREGLY D:594 , VAL D:595 , ARG D:596 , HOH D:1324 , HOH D:1393BINDING SITE FOR RESIDUE PO4 D 704
17BC8SOFTWARETY8 E:405 , HIS E:456 , HIS E:458 , HIS E:624BINDING SITE FOR RESIDUE CU E 701
18BC9SOFTWAREPRO E:209 , ASN E:210 , ARG E:211 , HOH E:1250 , HOH E:1373BINDING SITE FOR RESIDUE PO4 E 702
19CC1SOFTWAREHIS E:218 , LYS E:219BINDING SITE FOR RESIDUE PO4 E 703
20CC2SOFTWAREGLY E:594 , VAL E:595 , ARG E:596 , HOH E:1324 , HOH E:1393BINDING SITE FOR RESIDUE PO4 E 704
21CC3SOFTWARETY8 F:405 , HIS F:456 , HIS F:458 , HIS F:624BINDING SITE FOR RESIDUE CU F 701
22CC4SOFTWAREPRO F:209 , ASN F:210 , ARG F:211 , HOH F:1250 , HOH F:1373BINDING SITE FOR RESIDUE PO4 F 702
23CC5SOFTWAREHIS F:218 , LYS F:219BINDING SITE FOR RESIDUE PO4 F 703
24CC6SOFTWAREGLY F:594 , VAL F:595 , ARG F:596 , HOH F:1324 , HOH F:1393BINDING SITE FOR RESIDUE PO4 F 704

(-) SS Bonds  (6, 6)

Asymmetric Unit
No.Residues
1A:338 -A:364
2B:338 -B:364
3C:338 -C:364
4D:338 -D:364
5E:338 -E:364
6F:338 -F:364

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Phe A:310 -Pro A:311
2Phe A:631 -Pro A:632
3Phe B:310 -Pro B:311
4Phe B:631 -Pro B:632
5Phe C:310 -Pro C:311
6Phe C:631 -Pro C:632
7Phe D:310 -Pro D:311
8Phe D:631 -Pro D:632
9Phe E:310 -Pro E:311
10Phe E:631 -Pro E:632
11Phe F:310 -Pro F:311
12Phe F:631 -Pro F:632

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3NBJ)

(-) PROSITE Motifs  (2, 12)

Asymmetric Unit (2, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  6A:394-407
B:394-407
C:394-407
D:394-407
E:394-407
F:394-407
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  6A:619-632
B:619-632
C:619-632
D:619-632
E:619-632
F:619-632
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  2A:394-407
B:394-407
-
-
-
-
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  2A:619-632
B:619-632
-
-
-
-
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  2-
-
C:394-407
D:394-407
-
-
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  2-
-
C:619-632
D:619-632
-
-
Biological Unit 3 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  2-
-
-
-
E:394-407
F:394-407
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  2-
-
-
-
E:619-632
F:619-632
Biological Unit 4 (2, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  6A:394-407
B:394-407
C:394-407
D:394-407
E:394-407
F:394-407
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  6A:619-632
B:619-632
C:619-632
D:619-632
E:619-632
F:619-632

(-) Exons   (0, 0)

(no "Exon" information available for 3NBJ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:656
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:656
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  633                                       
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                632 |                                       
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627    | |636       646       656       666      
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFP-LMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhh..........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh.........eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O----------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nbj A  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPFGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLmMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627      |636       646       656       666      
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TY8                                                                                                                                                                                                                              634-ME0                                   


Chain B from PDB  Type:PROTEIN  Length:656
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:656
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  633                                       
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                632 |                                       
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627    | |636       646       656       666      
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFP-LMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhh..........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh.........eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O----------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nbj B  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPFGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLmMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627      |636       646       656       666      
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TY8                                                                                                                                                                                                                              634-ME0                                   


Chain C from PDB  Type:PROTEIN  Length:656
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:656
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  633                                       
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                632 |                                       
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627    | |636       646       656       666      
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFP-LMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhh..........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh.........eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O----------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nbj C  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPFGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLmMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627      |636       646       656       666      
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TY8                                                                                                                                                                                                                              634-ME0                                   


Chain D from PDB  Type:PROTEIN  Length:656
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:656
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  633                                       
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                632 |                                       
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627    | |636       646       656       666      
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFP-LMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhh..........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh.........eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O----------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nbj D  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPFGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLmMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627      |636       646       656       666      
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TY8                                                                                                                                                                                                                              634-ME0                                   


Chain E from PDB  Type:PROTEIN  Length:656
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:656
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  633                                       
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                632 |                                       
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627    | |636       646       656       666      
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFP-LMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhh..........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh.........eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O----------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nbj E  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPFGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLmMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627      |636       646       656       666      
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TY8                                                                                                                                                                                                                              634-ME0                                   


Chain F from PDB  Type:PROTEIN  Length:656
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:656
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  633                                       
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                632 |                                       
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627    | |636       646       656       666      
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFP-LMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -----Cu_amine_oxidN2-3nbjF01 F:23-109                                                       ----Cu_amine_oxidN3-3nbjF07 F:114-216                                                                      ------------------------Cu_amine_oxid-3nbjF13 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                        ---------- Pfam domains (1)
           Pfam domains (2) -----Cu_amine_oxidN2-3nbjF02 F:23-109                                                       ----Cu_amine_oxidN3-3nbjF08 F:114-216                                                                      ------------------------Cu_amine_oxid-3nbjF14 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                        ---------- Pfam domains (2)
           Pfam domains (3) -----Cu_amine_oxidN2-3nbjF03 F:23-109                                                       ----Cu_amine_oxidN3-3nbjF09 F:114-216                                                                      ------------------------Cu_amine_oxid-3nbjF15 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                        ---------- Pfam domains (3)
           Pfam domains (4) -----Cu_amine_oxidN2-3nbjF04 F:23-109                                                       ----Cu_amine_oxidN3-3nbjF10 F:114-216                                                                      ------------------------Cu_amine_oxid-3nbjF16 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                        ---------- Pfam domains (4)
           Pfam domains (5) -----Cu_amine_oxidN2-3nbjF05 F:23-109                                                       ----Cu_amine_oxidN3-3nbjF11 F:114-216                                                                      ------------------------Cu_amine_oxid-3nbjF17 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                        ---------- Pfam domains (5)
           Pfam domains (6) -----Cu_amine_oxidN2-3nbjF06 F:23-109                                                       ----Cu_amine_oxidN3-3nbjF12 F:114-216                                                                      ------------------------Cu_amine_oxid-3nbjF18 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                        ---------- Pfam domains (6)
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhh..........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh.........eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O----------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nbj F  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPFGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLmMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627      |636       646       656       666      
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TY8                                                                                                                                                                                                                              634-ME0
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3NBJ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3NBJ)

(-) Pfam Domains  (3, 18)

Asymmetric Unit
(-)
Clan: CuAO_N2_N3 (40)
(-)
Clan: no clan defined [family: Cu_amine_oxid] (40)

(-) Gene Ontology  (12, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (AMO_PICAN | P12807)
molecular function
    GO:0052595    aliphatic-amine oxidase activity    Catalysis of the reaction: an aliphatic amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide + H+.
    GO:0052594    aminoacetone:oxygen oxidoreductase(deaminating) activity    Catalysis of the reaction: aminoacetone + H2O + O2 = methylglyoxal + NH3 + hydrogen peroxide + H+.
    GO:0005507    copper ion binding    Interacting selectively and non-covalently with copper (Cu) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0052596    phenethylamine:oxygen oxidoreductase (deaminating) activity    Catalysis of the reaction: phenylethylamine + O2 + H2O = phenylacetaldehyde + NH3 + hydrogen peroxide + H+.
    GO:0008131    primary amine oxidase activity    Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.
    GO:0048038    quinone binding    Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
    GO:0052593    tryptamine:oxygen oxidoreductase (deaminating) activity    Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.
biological process
    GO:0009308    amine metabolic process    The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005777    peroxisome    A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.

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 Related Entries

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        AMO_PICAN | P12807: 1a2v 1ekm 2oov 2oqe 3n9h 3nbb 3sx1 3sxx 3t0u 4ev2 4ev5 4kfd 4kfe 4kff

(-) Related Entries Specified in the PDB File

1a2v COPPER AMINE OXIDASE FROM HANSENULA POLYMORPHA: THE CRYSTAL STRUCTURE DETERMINED AT 2.4 A RESOLUTION REVEALS THE ACTIVE CONFORMATION