Chain A from PDB Type:PROTEIN Length:85
aligned with RSBU_BACSU | P40399 from UniProtKB/Swiss-Prot Length:335
Alignment length:85
10 20 30 40 50 60 70 80
RSBU_BACSU 1 MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQ 85
SCOP domains d2j6ya_ A: automated matches SCOP domains
CATH domains 2j6yA00 A:1-85 KaiA/RbsU domain CATH domains
Pfam domains ------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------- Transcript
2j6y A 1 MDFREVIEQRYHQLLSRYIAELTKTSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQ 85
10 20 30 40 50 60 70 80
Chain B from PDB Type:PROTEIN Length:81
aligned with RSBU_BACSU | P40399 from UniProtKB/Swiss-Prot Length:335
Alignment length:81
14 24 34 44 54 64 74 84
RSBU_BACSU 5 EVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQ 85
SCOP domains d2j6yb_ B: automated matches SCOP domains
CATH domains 2j6yB00 B:5-85 KaiA/RbsU domain CATH domains
Pfam domains --------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------- Transcript
2j6y B 5 EVIEQRYHQLLSRYIAELTKTSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQ 85
14 24 34 44 54 64 74 84
Chain C from PDB Type:PROTEIN Length:85
aligned with RSBU_BACSU | P40399 from UniProtKB/Swiss-Prot Length:335
Alignment length:85
12 22 32 42 52 62 72 82
RSBU_BACSU 3 FREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQEH 87
SCOP domains d2j6yc_ C: automated matches SCOP domains
CATH domains 2j6yC00 C:3-87 KaiA/RbsU domain CATH domains
Pfam domains ------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------- Transcript
2j6y C 3 FREVIEQRYHQLLSRYIAELTKTSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQEH 87
12 22 32 42 52 62 72 82
Chain D from PDB Type:PROTEIN Length:84
aligned with RSBU_BACSU | P40399 from UniProtKB/Swiss-Prot Length:335
Alignment length:84
11 21 31 41 51 61 71 81
RSBU_BACSU 2 DFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQ 85
SCOP domains d2j6yd_ D: automated matches SCOP domains
CATH domains 2j6yD00 D:2-85 KaiA/RbsU domain CATH domains
Pfam domains ------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------ Transcript
2j6y D 2 DFREVIEQRYHQLLSRYIAELTKTSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQ 85
11 21 31 41 51 61 71 81
Chain E from PDB Type:PROTEIN Length:81
aligned with RSBU_BACSU | P40399 from UniProtKB/Swiss-Prot Length:335
Alignment length:81
11 21 31 41 51 61 71 81
RSBU_BACSU 2 DFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGM 82
SCOP domains d2j6ye_ E: automated matches SCOP domains
CATH domains 2j6yE00 E:2-82 KaiA/RbsU domain CATH domains
Pfam domains --------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------- Transcript
2j6y E 2 DFREVIEQRYHQLLSRYIAELTKTSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGM 82
11 21 31 41 51 61 71 81
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |