Chain A from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37a1 A:1-191 automated matches d2c37a2 A:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 A 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain B from PDB Type:PROTEIN Length:241
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:241
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
RRP41_SULSO 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37b1 B:8-155 Exosome complex exonuclease 1, ECX1 d2c37b2 B:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 B 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
Chain C from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37c1 C:1-191 automated matches d2c37c2 C:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 C 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain D from PDB Type:PROTEIN Length:247
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:247
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
RRP41_SULSO 2 REMLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37d1 D:2-155 Exosome complex exonuclease 1, ECX1 d2c37d2 D:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 D 2 REMLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
Chain E from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37e1 E:1-191 automated matches d2c37e2 E:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 E 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain F from PDB Type:PROTEIN Length:241
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:241
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
RRP41_SULSO 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37f1 F:8-155 Exosome complex exonuclease 1, ECX1 d2c37f2 F:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 F 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
Chain G from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37g1 G:1-191 automated matches d2c37g2 G:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 G 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain H from PDB Type:PROTEIN Length:241
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:241
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
RRP41_SULSO 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37h1 H:8-155 Exosome complex exonuclease 1, ECX1 d2c37h2 H:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 H 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
Chain I from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37i1 I:1-191 automated matches d2c37i2 I:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 I 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain J from PDB Type:PROTEIN Length:241
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:241
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
RRP41_SULSO 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37j1 J:8-155 Exosome complex exonuclease 1, ECX1 d2c37j2 J:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 J 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
Chain K from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37k1 K:1-191 automated matches d2c37k2 K:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 K 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain L from PDB Type:PROTEIN Length:247
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:247
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
RRP41_SULSO 2 REMLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37l1 L:2-155 Exosome complex exonuclease 1, ECX1 d2c37l2 L:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 L 2 REMLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
Chain M from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37m1 M:1-191 automated matches d2c37m2 M:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 M 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain N from PDB Type:PROTEIN Length:241
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:241
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
RRP41_SULSO 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37n1 N:8-155 Exosome complex exonuclease 1, ECX1 d2c37n2 N:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 N 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
Chain O from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37o1 O:1-191 automated matches d2c37o2 O:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 O 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain P from PDB Type:PROTEIN Length:248
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:248
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
RRP41_SULSO 1 MREMLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37p1 P:1-155 Exosome complex exonuclease 1, ECX1 d2c37p2 P:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 P 1 MREMLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
Chain Q from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37q1 Q:1-191 automated matches d2c37q2 Q:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 Q 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain R from PDB Type:PROTEIN Length:245
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:245
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243
RRP41_SULSO 4 MLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37r1 R:4-155 Exosome complex exonuclease 1, ECX1 d2c37r2 R:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...........................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 R 4 MLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243
Chain S from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37s1 S:1-191 automated matches d2c37s2 S:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 S 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain T from PDB Type:PROTEIN Length:247
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:247
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
RRP41_SULSO 2 REMLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37t1 T:2-155 Exosome complex exonuclease 1, ECX1 d2c37t2 T:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 T 2 REMLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
Chain U from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37u1 U:1-191 automated matches d2c37u2 U:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 U 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain V from PDB Type:PROTEIN Length:244
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:244
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244
RRP41_SULSO 5 LQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37v1 V:5-155 Exosome complex exonuclease 1, ECX1 d2c37v2 V:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 V 5 LQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244
Chain W from PDB Type:PROTEIN Length:260
aligned with RRP42_SULSO | Q9UXC0 from UniProtKB/Swiss-Prot Length:275
Alignment length:275
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
RRP42_SULSO 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
SCOP domains d2c37w1 W:1-191 automated matches d2c37w2 W:192-275 automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee........hhhhhhhhhhhhh...............eeeee.......eeeeeee..eeeeeeeeeeee..........eeeeeeee..-----------.hhhhhhhhhhhhhhhhh...hhhh.eee...eeeeeeeeeeeee...hhhhhhhhhhhhhhhhheeeeee.----.eeeeeeeeee.......eeeeeeee..eeee..hhhhhhhh.eeeeeee.....eeeeeee....eehhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 W 1 MSSTPSNQNIIPIIKKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLP-----------DENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQ----ISVNKNEVVGKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEELKKHLGI 275
10 20 30 40 50 60 70 80 90 | - | 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270
92 104 175 180
Chain X from PDB Type:PROTEIN Length:241
aligned with RRP41_SULSO | Q9UXC2 from UniProtKB/Swiss-Prot Length:248
Alignment length:241
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
RRP41_SULSO 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
SCOP domains d2c37x1 X:8-155 Exosome complex exonuclease 1, ECX1 d2c37x2 X:156-248 Exosome complex exonuclease 1, ECX1 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......................eeeee.......eeeeeee..eeeeeeeeeeee..hhhhh.....eeeeeeee.............hhhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeee...hhhhhhhhhhhhhhhhh........eeeeeee....eee..hhhhhhhh.eeeeeeee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2c37 X 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEGV 248
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
Description
