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1STZ
Asym. Unit
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Asym.Unit (169 KB)
Biol.Unit 1 (163 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN AT 2.2 A RESOLUTION
Authors
:
J. Liu, P. D. Adams, D. -H. Shin, C. Huang, H. Yokota, J. Jancarik, R. Kim, Berkeley Structural Genomics Center (Bsgc)
Date
:
25 Mar 04 (Deposition) - 24 Aug 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Hrca, Circe Element, Structural Genomics, Bsgc Structure Funded By Nih, Protein Structure Initiative, Psi, Berkeley Structural Genomics Center, Transcription
(Keyword Search:
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Reference
:
J. Liu, C. Huang, D. H. Shin, H. Yokota, J. Jancarik, J. S. Kim, P. D. Adams, R. Kim, S. H. Kim
Crystal Structure Of A Heat-Inducible Transcriptional Repressor Hrca From Thermotoga Maritima: Structural Insight Into Dna Binding And Dimerization.
J. Mol. Biol. V. 350 987 2005
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Hetero Components
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Sites
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 6)
Info
All SCOP Domains
1a: SCOP_d1stza1 (A:14-100)
1b: SCOP_d1stzb1 (B:11-95)
1c: SCOP_d1stzc1 (C:11-95)
2a: SCOP_d1stza2 (A:101-336)
2b: SCOP_d1stzb2 (B:111-336)
2c: SCOP_d1stzc2 (C:111-336)
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Protein Domains
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Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
Heat-inducible transcription repressor HrcA, N-terminal domain
(1)
Protein domain
:
Heat-inducible transcription repressor HrcA, N-terminal domain
(1)
Thermotoga maritima [TaxId: 2336]
(1)
1a
d1stza1
A:14-100
1b
d1stzb1
B:11-95
1c
d1stzc1
C:11-95
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Profilin-like
(304)
Superfamily
:
GAF domain-like
(54)
Family
:
HrcA C-terminal domain-like
(1)
Protein domain
:
Heat-inducible transcription repressor HrcA, C-terminal domain
(1)
Thermotoga maritima [TaxId: 2336]
(1)
2a
d1stza2
A:101-336
2b
d1stzb2
B:111-336
2c
d1stzc2
C:111-336
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CATH Domains
(3, 9)
Info
all CATH domains
1a: CATH_1stzA02 (A:99-140,A:230-336)
1b: CATH_1stzB02 (B:111-140,B:230-336)
1c: CATH_1stzC02 (C:111-140,C:230-336)
2a: CATH_1stzA03 (A:141-229)
2b: CATH_1stzB03 (B:141-229)
2c: CATH_1stzC03 (C:141-229)
3a: CATH_1stzA01 (A:14-98)
3b: CATH_1stzB01 (B:11-95)
3c: CATH_1stzC01 (C:11-95)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Beta-Lactamase
(202)
Homologous Superfamily
:
[code=3.30.450.40, no name defined]
(27)
Thermotoga maritima. Organism_taxid: 2336.
(1)
1a
1stzA02
A:99-140,A:230-336
1b
1stzB02
B:111-140,B:230-336
1c
1stzC02
C:111-140,C:230-336
Topology
:
Enolase-like; domain 1
(252)
Homologous Superfamily
:
Heat-inducible transcription repressor hrca homolog; domain 3
(1)
Thermotoga maritima. Organism_taxid: 2336.
(1)
2a
1stzA03
A:141-229
2b
1stzB03
B:141-229
2c
1stzC03
C:141-229
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
'winged helix' repressor DNA binding domain
(507)
Thermotoga maritima. Organism_taxid: 2336.
(11)
3a
1stzA01
A:14-98
3b
1stzB01
B:11-95
3c
1stzC01
C:11-95
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_HrcA_1stzC01 (C:117-317)
1b: PFAM_HrcA_1stzC02 (C:117-317)
1c: PFAM_HrcA_1stzC03 (C:117-317)
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Clan
:
no clan defined [family: HrcA]
(1)
Family
:
HrcA
(1)
Thermotoga maritima
(1)
1a
HrcA-1stzC01
C:117-317
1b
HrcA-1stzC02
C:117-317
1c
HrcA-1stzC03
C:117-317
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Asym.Unit (169 KB)
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