Chain A from PDB Type:PROTEIN Length:517
aligned with ULA1_HUMAN | Q13564 from UniProtKB/Swiss-Prot Length:534
Alignment length:529
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
ULA1_HUMAN 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
SCOP domains d3dbra_ A: Amyloid beta precursor protein-binding protein 1, APPBP1 SCOP domains
CATH domains 3dbrA01 A:6-178,A:388-534 NAD(P)-binding Rossmann-like Domain -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3dbrA01 A:6-178,A:388-534 NAD(P)-binding Rossmann-like Domain CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhh....eeeee................hhhhh..hhhhhhhhhhhh.....eeeee..hhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhh...eeeeeee..eeeeeee...eee.................hhhhhhhhhh..-------.....hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh....-----....hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhh....eee...hhhhhhh....hhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh........eeee....eeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------F------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 (1) Exon 2.1a ----------------------------------Exon 2.4 PDB: A:53-7----------Exon 2.6 PDB: A:84-107 Exon 2.7 PDB: A:108-134 ------------------------------------Exon 2.9 PDB: A:171-200 [INCOMPLETE]Exon 2.10 Exon 2.11 ------------------------------Exon 2.13 Exon 2.14 PDB: A:301-345 UniProt: 301-345 -------------------------Exon 2.16 ----------------------------Exon 2.18 PDB: A:413-444 -------------------------------------Exon 2.20 ----------------------------------- Transcript 2 (1)
Transcript 2 (2) ------------Exon 2.3a PDB: A:18-53 -------------------Exon 2.5 --------------------------------------------------Exon 2.8 PDB: A:134-171 ------------------------------------------------------------------------------Exon 2.12 PDB: A:250-280 (gaps----------------------------------------------------------------Exon 2.15 PDB: A:345-370 -------------Exon 2.17 PDB: A:384-413 ------------------------------Exon 2.19 PDB: A:444-482 ----------------Exon 2.21b PDB: A:499-534 Transcript 2 (2)
3dbr A 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYD-------DHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILK-----PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 | - | 215 225 235 245 | - | 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
200 208 253 259
Chain B from PDB Type:PROTEIN Length:432
aligned with UBA3_HUMAN | Q8TBC4 from UniProtKB/Swiss-Prot Length:463
Alignment length:432
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461
UBA3_HUMAN 32 GDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS 463
SCOP domains d3dbrb_ B: UBA3 SCOP domains
CATH domains 3dbrB01 B:11-209,B:289-339 NAD(P)-binding Rossmann-like Domain --3dbrB02 B:212-288 Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 3dbrB01 B:11-209,B:289-339 3dbrB03 B:340-400 ------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ......hhhhhhhhh..............hhhhhhhhhheeeee...hhhhhhhhhhhh....eeeee.....hhhhh......hhhhh..hhhhhhhhhhhhhh.....eee..hhhhhhhhhhh...eeee...hhhhhhhhhhhhhhh..ee..ee.......eeeeeee..eeeeeee........hhhhhhh......hhhhhhhh..hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.......eeeee.....eeeee.........................hhhhhhhhhhh.........eeee....eeeee...hhhhhhhhhhhhh.............eeeee..eeeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UBIQUITIN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 3 (1) Exon 3.3a PDB: B:11-40 Exon 3.4a PDB: B:41-67 Exon 3.5a PDB: B:68-95 --------------------------Exon 3.7a ---------------------Exon 3.9 PDB: B:159-210 UniProt: 180-231 Exon 3.10 PDB: B:211-245 -------------------------------------Exon 3.12 -----------Exon 3.14 PDB: B:313-340 Exon 3.15 PDB: B:341-374 ---------------------Exon 3.17 ---------------------------- Transcript 3 (1)
Transcript 3 (2) ------------------------------------------------------------------------------------Exon 3.6 PDB: B:95-122 --------------Exon 3.8 --------------------------------------------------------------------------------------Exon 3.11a PDB: B:245-283 -----------------Exon 3.13 ------------------------------------------------------------Exon 3.16 ------------------Exon 3.18b PDB: B:414-442 Transcript 3 (2)
3dbr B 11 LDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAQVILPGMTACIECTLELYPPQVNFPMATIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS 442
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440
Chain C from PDB Type:PROTEIN Length:516
aligned with ULA1_HUMAN | Q13564 from UniProtKB/Swiss-Prot Length:534
Alignment length:529
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
ULA1_HUMAN 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
SCOP domains d3dbrc_ C: Amyloid beta precursor protein-binding protein 1, APPBP1 SCOP domains
CATH domains 3dbrC01 C:6-178,C:388-534 NAD(P)-binding Rossmann-like Domain -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3dbrC01 C:6-178,C:388-534 NAD(P)-binding Rossmann-like Domain CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhh.hhhhhhhhhhhhhhhhhhh.eee...hhhhhhhhhhhhh..............hhhhhh.....hhhhh..hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh.eeee...hhhhhhhhhhhhhhhh..eeeeeee..eeeeeee...eee.................hhhhhhhhhhh.--------....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh....-----....hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhheee...hhhhhhh....hhhhhhhhh.....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.......eeeee....eeeee.. Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------F------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 (1) Exon 2.1a ----------------------------------Exon 2.4 PDB: C:53-7----------Exon 2.6 PDB: C:84-107 Exon 2.7 PDB: C:108-134 ------------------------------------Exon 2.9 PDB: C:171-200 [INCOMPLETE]Exon 2.10 Exon 2.11 ------------------------------Exon 2.13 Exon 2.14 PDB: C:301-345 UniProt: 301-345 -------------------------Exon 2.16 ----------------------------Exon 2.18 PDB: C:413-444 -------------------------------------Exon 2.20 ----------------------------------- Transcript 2 (1)
Transcript 2 (2) ------------Exon 2.3a PDB: C:18-53 -------------------Exon 2.5 --------------------------------------------------Exon 2.8 PDB: C:134-171 ------------------------------------------------------------------------------Exon 2.12 PDB: C:250-280 (gaps----------------------------------------------------------------Exon 2.15 PDB: C:345-370 -------------Exon 2.17 PDB: C:384-413 ------------------------------Exon 2.19 PDB: C:444-482 ----------------Exon 2.21b PDB: C:499-534 Transcript 2 (2)
3dbr C 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYD--------HSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILK-----PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 | - | 215 225 235 245 | - | 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
200 209 253 259
Chain D from PDB Type:PROTEIN Length:431
aligned with UBA3_HUMAN | Q8TBC4 from UniProtKB/Swiss-Prot Length:463
Alignment length:431
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461
UBA3_HUMAN 32 GDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFT 462
SCOP domains d3dbrd_ D: UBA3 SCOP domains
CATH domains 3dbrD01 D:11-209,D:289-339 NAD(P)-binding Rossmann-like Domain --3dbrD02 D:212-288 Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 3dbrD01 D:11-209,D:289-339 3dbrD03 D:340-400 ----------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhh.............hhhhhhhhh.eeeee...hhhhhhhhhhhhh...eeeee.....hhhhh.............hhhhhhhhhhhhhh.....eee..hhhhhhhhhhh...eeee...hhhhhhhhhhhhhhh..ee..ee.hhhh..eeeeeee..eeeeeee.....................hhhhhh....hhhhhhh......................hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.......eeeee.....eeeee...............eeeee.....hhhhhhhhhhh........eeeee....eeeee...hhhhhhhhhhhhh..hhhhh.....eeeee.......eeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UBIQUITIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 3 (1) Exon 3.3a PDB: D:11-40 Exon 3.4a PDB: D:41-67 Exon 3.5a PDB: D:68-95 --------------------------Exon 3.7a ---------------------Exon 3.9 PDB: D:159-210 UniProt: 180-231 Exon 3.10 PDB: D:211-245 -------------------------------------Exon 3.12 -----------Exon 3.14 PDB: D:313-340 Exon 3.15 PDB: D:341-374 ---------------------Exon 3.17 --------------------------- Transcript 3 (1)
Transcript 3 (2) ------------------------------------------------------------------------------------Exon 3.6 PDB: D:95-122 --------------Exon 3.8 --------------------------------------------------------------------------------------Exon 3.11a PDB: D:245-283 -----------------Exon 3.13 ------------------------------------------------------------Exon 3.16 ------------------Exon 3.18b PDB: D:414-441 Transcript 3 (2)
3dbr D 11 LDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAQVILPGMTACIECTLELYPPQVNFPMATIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFT 441
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440
Chain E from PDB Type:PROTEIN Length:515
aligned with ULA1_HUMAN | Q13564 from UniProtKB/Swiss-Prot Length:534
Alignment length:529
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
ULA1_HUMAN 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
SCOP domains d3dbre_ E: Amyloid beta precursor protein-binding protein 1, APPBP1 SCOP domains
CATH domains 3dbrE01 E:6-178,E:388-534 NAD(P)-binding Rossmann-like Domain -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3dbrE01 E:6-178,E:388-534 NAD(P)-binding Rossmann-like Domain CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhh....eeeee.....hhhhhhhh...hhhhh..hhhhhhhhhhhhh.......ee..hhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhhh..eeeeeee..eeeeeee...eee.................hhhhhhhhhh...---------..hhhhhhhhhhhhhhhh.........hhhhhhhhhhhh....-----...hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh....eee...hhhhhhh....hhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.......eeeee....eeeee.. Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------F------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 (1) Exon 2.1a ----------------------------------Exon 2.4 PDB: E:53-7----------Exon 2.6 PDB: E:84-107 Exon 2.7 PDB: E:108-134 ------------------------------------Exon 2.9 PDB: E:171-201 [INCOMPLETE]Exon 2.10 Exon 2.11 ------------------------------Exon 2.13 Exon 2.14 PDB: E:301-345 UniProt: 301-345 -------------------------Exon 2.16 ----------------------------Exon 2.18 PDB: E:413-444 -------------------------------------Exon 2.20 ----------------------------------- Transcript 2 (1)
Transcript 2 (2) ------------Exon 2.3a PDB: E:18-53 -------------------Exon 2.5 --------------------------------------------------Exon 2.8 PDB: E:134-171 ------------------------------------------------------------------------------Exon 2.12 PDB: E:250-280 (gaps----------------------------------------------------------------Exon 2.15 PDB: E:345-370 -------------Exon 2.17 PDB: E:384-413 ------------------------------Exon 2.19 PDB: E:444-482 ----------------Exon 2.21b PDB: E:499-534 Transcript 2 (2)
3dbr E 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDL---------HTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILK-----PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 | - | 215 225 235 245 | - | 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
201 211 253 259
Chain F from PDB Type:PROTEIN Length:431
aligned with UBA3_HUMAN | Q8TBC4 from UniProtKB/Swiss-Prot Length:463
Alignment length:431
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461
UBA3_HUMAN 32 GDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFT 462
SCOP domains d3dbrf_ F: UBA3 SCOP domains
CATH domains 3dbrF01 F:11-209,F:289-339 NAD(P)-binding Rossmann-like Domain --3dbrF02 F:212-288 Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 3dbrF01 F:11-209,F:289-339 3dbrF03 F:340-400 ----------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhh..............hhhhhhhhhheeeee...hhhhhhhhhhhhh...eeeee......hhhhhh...........hhhhhhhhhhhhhh.....eee.......hhhhhh...eee....hhhhhhhhhhhhhhh..ee..ee.hhhh..eeeeeee..eeeeeee..........hhhhh......hhhhhh......hhhhhhhhhh.hhhhh...........hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.......eeeee.....eeeee...............eeee......hhhhhhhhhhh........eeeee....ee......hhhhhhhhhhhhh..............eeee..eeeee.eeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UBIQUITIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 3 (1) Exon 3.3a PDB: F:11-40 Exon 3.4a PDB: F:41-67 Exon 3.5a PDB: F:68-95 --------------------------Exon 3.7a ---------------------Exon 3.9 PDB: F:159-210 UniProt: 180-231 Exon 3.10 PDB: F:211-245 -------------------------------------Exon 3.12 -----------Exon 3.14 PDB: F:313-340 Exon 3.15 PDB: F:341-374 ---------------------Exon 3.17 --------------------------- Transcript 3 (1)
Transcript 3 (2) ------------------------------------------------------------------------------------Exon 3.6 PDB: F:95-122 --------------Exon 3.8 --------------------------------------------------------------------------------------Exon 3.11a PDB: F:245-283 -----------------Exon 3.13 ------------------------------------------------------------Exon 3.16 ------------------Exon 3.18b PDB: F:414-441 Transcript 3 (2)
3dbr F 11 LDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAQVILPGMTACIECTLELYPPQVNFPMATIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFT 441
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440
Chain G from PDB Type:PROTEIN Length:508
aligned with ULA1_HUMAN | Q13564 from UniProtKB/Swiss-Prot Length:534
Alignment length:529
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
ULA1_HUMAN 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
SCOP domains d3dbrg_ G: Amyloid beta precursor protein-binding protein 1, APPBP1 SCOP domains
CATH domains 3dbrG01 G:6-178,G:388-534 NAD(P)-binding Rossmann-like Domain -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3dbrG01 G:6-178,G:388-534 NAD(P)-binding Rossmann-like Domain CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhh....eeeee.....hhhhhhh...........hhhhhhhhhhhh.....eeeee..hhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhh...eeeeeee..eeeeeee.......................hhhhhhhhhh.------------.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...---------.hhhhhh.hhhhh.......hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhh......hhhhhhh....hhhhhhhhh.....hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.......eeeee....eeeee.. Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------F------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 (1) Exon 2.1a ----------------------------------Exon 2.4 PDB: G:53-7----------Exon 2.6 PDB: G:84-107 Exon 2.7 PDB: G:108-134 ------------------------------------Exon 2.9 PDB: G:171-199 [INCOMPLETE]Exon 2.10 Exon 2.11 ------------------------------Exon 2.13 Exon 2.14 PDB: G:301-345 UniProt: 301-345 -------------------------Exon 2.16 ----------------------------Exon 2.18 PDB: G:413-444 -------------------------------------Exon 2.20 ----------------------------------- Transcript 2 (1)
Transcript 2 (2) ------------Exon 2.3a PDB: G:18-53 -------------------Exon 2.5 --------------------------------------------------Exon 2.8 PDB: G:134-171 ------------------------------------------------------------------------------Exon 2.12 PDB: G:250-280 (gaps----------------------------------------------------------------Exon 2.15 PDB: G:345-370 -------------Exon 2.17 PDB: G:384-413 ------------------------------Exon 2.19 PDB: G:444-482 ----------------Exon 2.21b PDB: G:499-534 Transcript 2 (2)
3dbr G 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSY------------TPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGIL---------EENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 | - |215 225 235 245 | - |265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
199 212 252 262
Chain H from PDB Type:PROTEIN Length:431
aligned with UBA3_HUMAN | Q8TBC4 from UniProtKB/Swiss-Prot Length:463
Alignment length:431
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461
UBA3_HUMAN 32 GDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFT 462
SCOP domains d3dbrh_ H: UBA3 SCOP domains
CATH domains 3dbrH01 H:11-209,H:289-339 NAD(P)-binding Rossmann-like Domain --3dbrH02 H:212-288 Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 3dbrH01 H:11-209,H:289-339 3dbrH03 H:340-400 ----------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhh.............hhhhhhhhhh.eeee...hhhhhhhhhhhhhh...eeee.....hhhhh.............hhhhhhhhhhhhhh.....eee..........hhhhh.eeee...hhhhhhhhhhhhhh...ee..ee.hhhh..eeeeeee..eeeeeee.....................hhhhh.......hhhhhhhhhh.................hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.......eeeee.....eeeee................eee.....hhhhh.hhhhhhhhhh....eeeee....ee......hhhhhhhhhhhh...hhhhh.......eeee..eeeeee.eee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UBIQUITIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 3 (1) Exon 3.3a PDB: H:11-40 Exon 3.4a PDB: H:41-67 Exon 3.5a PDB: H:68-95 --------------------------Exon 3.7a ---------------------Exon 3.9 PDB: H:159-210 UniProt: 180-231 Exon 3.10 PDB: H:211-245 -------------------------------------Exon 3.12 -----------Exon 3.14 PDB: H:313-340 Exon 3.15 PDB: H:341-374 ---------------------Exon 3.17 --------------------------- Transcript 3 (1)
Transcript 3 (2) ------------------------------------------------------------------------------------Exon 3.6 PDB: H:95-122 --------------Exon 3.8 --------------------------------------------------------------------------------------Exon 3.11a PDB: H:245-283 -----------------Exon 3.13 ------------------------------------------------------------Exon 3.16 ------------------Exon 3.18b PDB: H:414-441 Transcript 3 (2)
3dbr H 11 LDWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAQVILPGMTACIECTLELYPPQVNFPMATIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFT 441
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440
Chain I from PDB Type:PROTEIN Length:85
aligned with NEDD8_HUMAN | Q15843 from UniProtKB/Swiss-Prot Length:81
Alignment length:85
1
1 11 21 31 41 51 61 71
NEDD8_HUMAN - ---------MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
SCOP domains d3dbri_ I: Nedd8 SCOP domains
CATH domains ------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .........eeeeee.....eeeeee....hhhhhhhhhhhhhh.hhhhh.eee..ee......hhhhh.....eeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---------UBIQUITIN_2 PDB: I:101-176 UniProt: 1-76 PROSITE (1)
PROSITE (2) -----------------------------------UBIQUITIN_1 PDB: I:127-15------------------------ PROSITE (2)
Transcript 1 (1) ---------1.1a Exon 1.4 Exon 1.5a PDB: I:123-150 -------------------------- Transcript 1 (1)
Transcript 1 (2) ----------------------------------------------------------Exon 1.6e PDB: I:150-176 Transcript 1 (2)
3dbr I 91 RRASVGSGSMLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLRLRGG 176
|101 111 121 131 141 151 161 171
97|
99
Chain J from PDB Type:PROTEIN Length:77
aligned with NEDD8_HUMAN | Q15843 from UniProtKB/Swiss-Prot Length:81
Alignment length:77
1
| 9 19 29 39 49 59 69
NEDD8_HUMAN - -MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
SCOP domains d3dbrj_ J: Nedd8 SCOP domains
CATH domains ----------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee.....eeeeee....hhhhhhhhhhhhhh......eeee..ee................eeeee...... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -UBIQUITIN_2 PDB: J:101-176 UniProt: 1-76 PROSITE (1)
PROSITE (2) ---------------------------UBIQUITIN_1 PDB: J:127-15------------------------ PROSITE (2)
Transcript 1 (1) -1.1a Exon 1.4 Exon 1.5a PDB: J:123-150 -------------------------- Transcript 1 (1)
Transcript 1 (2) --------------------------------------------------Exon 1.6e PDB: J:150-176 Transcript 1 (2)
3dbr J 100 SMLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLRLRGG 176
109 119 129 139 149 159 169
Chain K from PDB Type:PROTEIN Length:77
aligned with NEDD8_HUMAN | Q15843 from UniProtKB/Swiss-Prot Length:81
Alignment length:77
1
| 9 19 29 39 49 59 69
NEDD8_HUMAN - -MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
SCOP domains d3dbrk_ K: Nedd8 SCOP domains
CATH domains ----------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee.....eeeeee....hhhhhhhhhhhhhh.hhhhh.eee..ee................eeee....... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -UBIQUITIN_2 PDB: K:101-176 UniProt: 1-76 PROSITE (1)
PROSITE (2) ---------------------------UBIQUITIN_1 PDB: K:127-15------------------------ PROSITE (2)
Transcript 1 (1) -1.1a Exon 1.4 Exon 1.5a PDB: K:123-150 -------------------------- Transcript 1 (1)
Transcript 1 (2) --------------------------------------------------Exon 1.6e PDB: K:150-176 Transcript 1 (2)
3dbr K 100 SMLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLRLRGG 176
109 119 129 139 149 159 169
Chain L from PDB Type:PROTEIN Length:78
aligned with NEDD8_HUMAN | Q15843 from UniProtKB/Swiss-Prot Length:81
Alignment length:78
1
| 8 18 28 38 48 58 68
NEDD8_HUMAN - --MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
SCOP domains d3dbrl_ L: Nedd8 SCOP domains
CATH domains ------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...eeeee.....eeeee.....hhhhhhhhhhhhhh.hhhhheeee..ee................eeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (1) --UBIQUITIN_2 PDB: L:101-176 UniProt: 1-76 PROSITE (1)
PROSITE (2) ----------------------------UBIQUITIN_1 PDB: L:127-15------------------------ PROSITE (2)
Transcript 1 (1) --1.1a Exon 1.4 Exon 1.5a PDB: L:123-150 -------------------------- Transcript 1 (1)
Transcript 1 (2) ---------------------------------------------------Exon 1.6e PDB: L:150-176 Transcript 1 (2)
3dbr L 99 GSMLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLRLRGG 176
108 118 128 138 148 158 168
Legend: |
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(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |