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(-) Description

Title :  X-RAY STRUCTURE OF THE DESULFOVIBRIO DESULFURICANS BACTERIOFERRITIN: THE DIIRON SITE IN DIFFERENT STATES (REDUCED STRUCTURE)
 
Authors :  S. Macedo, C. V. Romao, E. Mitchell, P. M. Matias, M. Y. Liu, A. V. Xavier, M. Teixeira, P. Lindley, M. A. Carrondo
Date :  13 Dec 02  (Deposition) - 01 Apr 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P  (1x)
Biol. Unit 2:  A,B,G,H,I,J,M,N  (3x)
Biol. Unit 3:  C,D,E,F,K,L,O,P  (3x)
Keywords :  Bacterioferritin, Active As 24-Mer, Diiron Centre, Fe-Coproporphyrin Iii Haem Cofactor, Iron Storage-Electron Transport Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. Macedo, C. V. Romao, E. Mitchell, P. M. Matias, M. Y. Liu, A. V. Xavier J. Legall, M. Teixeira, P. Lindley, M. A. Carrondo
The Nature Of The Di-Iron Site In The Bacterioferritin From Desulfovibrio Desulfuricans
Nat. Struct. Biol. V. 10 285 2003
PubMed-ID: 12627224  |  Reference-DOI: 10.1038/NSB909
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BACTERIOFERRITIN
    ChainsA, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P
    Organism ScientificDESULFOVIBRIO DESULFURICANS
    Organism Taxid876
    StrainATCC 27774

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric Unit ABCDEFGHIJKLMNOP
Biological Unit 1 (1x)ABCDEFGHIJKLMNOP
Biological Unit 2 (3x)AB    GHIJ  MN  
Biological Unit 3 (3x)  CDEF    KL  OP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 96)

Asymmetric Unit (3, 96)
No.NameCountTypeFull Name
1FE232Ligand/IonFE (II) ION
2FEC8Ligand/Ion1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONICACID FERROUS COMPLEX
3SO456Ligand/IonSULFATE ION
Biological Unit 1 (3, 96)
No.NameCountTypeFull Name
1FE232Ligand/IonFE (II) ION
2FEC8Ligand/Ion1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONICACID FERROUS COMPLEX
3SO456Ligand/IonSULFATE ION
Biological Unit 2 (3, 150)
No.NameCountTypeFull Name
1FE248Ligand/IonFE (II) ION
2FEC12Ligand/Ion1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONICACID FERROUS COMPLEX
3SO490Ligand/IonSULFATE ION
Biological Unit 3 (3, 138)
No.NameCountTypeFull Name
1FE248Ligand/IonFE (II) ION
2FEC12Ligand/Ion1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONICACID FERROUS COMPLEX
3SO478Ligand/IonSULFATE ION

(-) Sites  (96, 96)

Asymmetric Unit (96, 96)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:23 , GLU A:56 , HIS A:59 , GLU A:132 , HOH A:1094BINDING SITE FOR RESIDUE FE2 A 200
02AC2SOFTWAREGLU A:56 , GLU A:99 , GLU A:132 , HIS A:135BINDING SITE FOR RESIDUE FE2 A 201
03AC3SOFTWARELYS A:50 , SER A:163 , THR A:164 , GLY A:165 , HOH A:1054BINDING SITE FOR RESIDUE SO4 A 1001
04AC4SOFTWARESER A:144 , ASN A:148 , HOH B:1201BINDING SITE FOR RESIDUE SO4 A 1003
05AC5SOFTWARETHR A:76 , GLN A:77 , LYS B:78 , LYS B:81 , VAL B:82 , HOH B:1154 , HOH B:1202 , HOH B:1216BINDING SITE FOR RESIDUE SO4 B 1005
06AC6SOFTWAREPRO A:161 , SER A:162 , SER A:163BINDING SITE FOR RESIDUE SO4 A 1006
07AC7SOFTWAREGLU B:23 , GLU B:56 , HIS B:59 , GLU B:132 , HOH B:1190BINDING SITE FOR RESIDUE FE2 B 200
08AC8SOFTWAREGLU B:56 , GLU B:99 , GLU B:132 , HIS B:135 , HOH B:1208BINDING SITE FOR RESIDUE FE2 B 201
09AC9SOFTWAREFEC A:1007 , LYS B:50 , SER B:163 , THR B:164 , HOH B:1125 , HOH B:1218 , HOH B:1219BINDING SITE FOR RESIDUE SO4 B 1101
10BC1SOFTWARESER B:144 , ASN B:148BINDING SITE FOR RESIDUE SO4 B 1103
11BC2SOFTWARELYS B:114 , LYS G:114 , LYS N:114BINDING SITE FOR RESIDUE SO4 B 1104
12BC3SOFTWAREPRO B:161 , SER B:162 , SER B:163 , HOH B:1199 , HOH B:1207BINDING SITE FOR RESIDUE SO4 B 1106
13BC4SOFTWAREGLU C:23 , GLU C:56 , HIS C:59 , GLU C:132 , HOH C:1250BINDING SITE FOR RESIDUE FE2 C 200
14BC5SOFTWAREGLU C:56 , GLU C:99 , GLU C:132 , HIS C:135BINDING SITE FOR RESIDUE FE2 C 201
15BC6SOFTWARELYS C:50 , SER C:163 , THR C:164 , GLY C:165 , FEC C:1207BINDING SITE FOR RESIDUE SO4 C 1201
16BC7SOFTWARESER C:144 , ASN C:148BINDING SITE FOR RESIDUE SO4 C 1203
17BC8SOFTWARELYS C:114BINDING SITE FOR RESIDUE SO4 C 1204
18BC9SOFTWAREPRO C:161 , SER C:162 , SER C:163 , HOH C:9486BINDING SITE FOR RESIDUE SO4 C 1206
19CC1SOFTWAREGLU D:23 , GLU D:56 , HIS D:59 , GLU D:132 , HOH D:1350BINDING SITE FOR RESIDUE FE2 D 200
20CC2SOFTWAREGLU D:56 , GLU D:99 , GLU D:132 , HIS D:135BINDING SITE FOR RESIDUE FE2 D 201
21CC3SOFTWARELYS D:50 , SER D:163 , THR D:164 , GLY D:165 , HOH D:9670BINDING SITE FOR RESIDUE SO4 D 1301
22CC4SOFTWARESER D:144 , LYS D:147 , ASN D:148 , HOH D:291BINDING SITE FOR RESIDUE SO4 D 1303
23CC5SOFTWARELYS E:114 , HOH E:9338 , LYS O:114BINDING SITE FOR RESIDUE SO4 E 1304
24CC6SOFTWAREPRO D:161 , SER D:162 , SER D:163 , HOH D:9704BINDING SITE FOR RESIDUE SO4 D 1306
25CC7SOFTWAREGLU E:23 , GLU E:56 , HIS E:59 , GLU E:132 , HOH E:1450BINDING SITE FOR RESIDUE FE2 E 200
26CC8SOFTWAREGLU E:56 , GLU E:99 , GLU E:132 , HIS E:135 , HOH E:9734BINDING SITE FOR RESIDUE FE2 E 201
27CC9SOFTWARESER E:144 , LYS E:147 , ASN E:148BINDING SITE FOR RESIDUE SO4 E 1403
28DC1SOFTWAREPRO E:161 , SER E:162 , SER E:163BINDING SITE FOR RESIDUE SO4 E 1406
29DC2SOFTWAREGLU F:23 , GLU F:56 , HIS F:59 , GLU F:132 , HOH F:1550BINDING SITE FOR RESIDUE FE2 F 200
30DC3SOFTWAREGLU F:56 , GLU F:99 , GLU F:132 , HIS F:135BINDING SITE FOR RESIDUE FE2 F 201
31DC4SOFTWAREFEC E:1407 , LYS F:50 , SER F:163 , THR F:164 , GLY F:165 , HOH F:448 , HOH F:450BINDING SITE FOR RESIDUE SO4 F 1501
32DC5SOFTWAREASN F:4 , ARG F:5 , HOH F:521BINDING SITE FOR RESIDUE SO4 F 1502
33DC6SOFTWARELYS F:114 , LYS K:114 , LYS P:114BINDING SITE FOR RESIDUE SO4 P 1504
34DC7SOFTWAREPRO F:161 , SER F:162 , SER F:163 , HOH F:9473BINDING SITE FOR RESIDUE SO4 F 1506
35DC8SOFTWAREGLU G:23 , GLU G:56 , HIS G:59 , GLU G:132 , HOH G:1650BINDING SITE FOR RESIDUE FE2 G 200
36DC9SOFTWAREGLU G:56 , GLU G:99 , GLU G:132 , HIS G:135BINDING SITE FOR RESIDUE FE2 G 201
37EC1SOFTWARELYS G:50 , SER G:162 , SER G:163 , THR G:164 , HOH G:622 , HOH G:9629BINDING SITE FOR RESIDUE SO4 G 1601
38EC2SOFTWARESER G:144 , ASN G:148BINDING SITE FOR RESIDUE SO4 G 1603
39EC3SOFTWAREPRO G:161 , SER G:162 , SER G:163 , HOH G:9475BINDING SITE FOR RESIDUE SO4 G 1606
40EC4SOFTWAREGLU H:23 , GLU H:56 , HIS H:59 , GLU H:132 , HOH H:1750BINDING SITE FOR RESIDUE FE2 H 200
41EC5SOFTWAREGLU H:56 , GLU H:99 , GLU H:132 , HIS H:135BINDING SITE FOR RESIDUE FE2 H 201
42EC6SOFTWARELYS H:50 , SER H:163 , THR H:164 , GLY H:165 , HOH H:9269BINDING SITE FOR RESIDUE SO4 H 1701
43EC7SOFTWAREASN H:4 , ARG H:5BINDING SITE FOR RESIDUE SO4 H 1702
44EC8SOFTWARESER H:144 , ASN H:148BINDING SITE FOR RESIDUE SO4 H 1703
45EC9SOFTWARELYS H:114 , LYS I:114 , HOH I:9707 , LYS M:114BINDING SITE FOR RESIDUE SO4 I 1704
46FC1SOFTWAREPRO H:161 , SER H:162 , SER H:163BINDING SITE FOR RESIDUE SO4 H 1706
47FC2SOFTWAREGLU I:23 , GLU I:56 , HIS I:59 , GLU I:132 , HOH I:1850BINDING SITE FOR RESIDUE FE2 I 200
48FC3SOFTWAREGLU I:56 , GLU I:99 , GLU I:132 , HIS I:135BINDING SITE FOR RESIDUE FE2 I 201
49FC4SOFTWARELYS I:50 , THR I:164 , GLY I:165 , HOH I:768 , HOH I:9464BINDING SITE FOR RESIDUE SO4 I 1801
50FC5SOFTWAREASN I:4 , ARG I:5 , ASN L:4 , ARG L:5 , SO4 L:2102 , HOH L:9529BINDING SITE FOR RESIDUE SO4 I 1802
51FC6SOFTWARESER I:144 , LYS I:147 , ASN I:148BINDING SITE FOR RESIDUE SO4 I 1803
52FC7SOFTWAREPRO I:161 , SER I:162 , SER I:163 , HOH I:827BINDING SITE FOR RESIDUE SO4 I 1804
53FC8SOFTWAREGLU J:23 , GLU J:56 , HIS J:59 , GLU J:132 , HOH J:1950BINDING SITE FOR RESIDUE FE2 J 200
54FC9SOFTWAREGLU J:56 , GLU J:99 , GLU J:132 , HIS J:135BINDING SITE FOR RESIDUE FE2 J 201
55GC1SOFTWAREFEC I:1805 , LYS J:50 , THR J:164 , GLY J:165 , HOH J:723BINDING SITE FOR RESIDUE SO4 J 1901
56GC2SOFTWARELYS J:114BINDING SITE FOR RESIDUE SO4 J 1904
57GC3SOFTWAREPRO J:161 , SER J:162 , SER J:163BINDING SITE FOR RESIDUE SO4 J 1906
58GC4SOFTWAREGLU K:23 , GLU K:56 , HIS K:59 , GLU K:132 , HOH K:2050BINDING SITE FOR RESIDUE FE2 K 200
59GC5SOFTWAREGLU K:56 , GLU K:99 , GLU K:132 , HIS K:135 , HOH K:9504BINDING SITE FOR RESIDUE FE2 K 201
60GC6SOFTWARELYS K:50 , SER K:163 , THR K:164 , HOH K:9313BINDING SITE FOR RESIDUE SO4 K 2001
61GC7SOFTWARESER K:144 , LYS K:147 , ASN K:148BINDING SITE FOR RESIDUE SO4 K 2003
62GC8SOFTWAREPRO K:161 , SER K:162 , SER K:163 , HOH K:9678 , HOH K:9705BINDING SITE FOR RESIDUE SO4 K 2006
63GC9SOFTWAREGLU L:23 , GLU L:56 , HIS L:59 , GLU L:132 , HOH L:2150BINDING SITE FOR RESIDUE FE2 L 200
64HC1SOFTWAREGLU L:56 , GLU L:99 , GLU L:132 , HIS L:135BINDING SITE FOR RESIDUE FE2 L 201
65HC2SOFTWARELYS L:50 , SER L:162 , SER L:163 , THR L:164 , HOH L:891 , HOH L:9317BINDING SITE FOR RESIDUE SO4 L 2101
66HC3SOFTWAREASN I:4 , ARG I:5 , SO4 I:1802 , ASN L:4 , ARG L:5 , HOH L:971 , HOH L:9529BINDING SITE FOR RESIDUE SO4 L 2102
67HC4SOFTWARELYS L:114 , HOH L:9713BINDING SITE FOR RESIDUE SO4 L 2104
68HC5SOFTWAREPRO L:161 , SER L:162 , SER L:163BINDING SITE FOR RESIDUE SO4 L 2106
69HC6SOFTWAREGLU M:23 , GLU M:56 , HIS M:59 , GLU M:132 , HOH M:2250BINDING SITE FOR RESIDUE FE2 M 200
70HC7SOFTWAREGLU M:56 , GLU M:99 , GLU M:132 , HIS M:135BINDING SITE FOR RESIDUE FE2 M 201
71HC8SOFTWARELYS M:50 , SER M:163 , THR M:164 , HOH M:9004 , HOH M:9457BINDING SITE FOR RESIDUE SO4 M 2201
72HC9SOFTWAREASN M:4 , ARG M:5BINDING SITE FOR RESIDUE SO4 M 2202
73IC1SOFTWAREHOH L:9319 , SER M:144 , LYS M:147 , ASN M:148BINDING SITE FOR RESIDUE SO4 M 2203
74IC2SOFTWAREPRO M:161 , SER M:162 , SER M:163BINDING SITE FOR RESIDUE SO4 M 2206
75IC3SOFTWAREGLU N:23 , GLU N:56 , HIS N:59 , GLU N:132 , HOH N:2319BINDING SITE FOR RESIDUE FE2 N 200
76IC4SOFTWAREGLU N:56 , GLU N:99 , GLU N:132 , HIS N:135 , HOH N:2408BINDING SITE FOR RESIDUE FE2 N 201
77IC5SOFTWARELYS N:50 , SER N:163 , THR N:164 , HOH N:2335 , HOH N:2413BINDING SITE FOR RESIDUE SO4 N 2301
78IC6SOFTWARESER N:144 , ASN N:148BINDING SITE FOR RESIDUE SO4 N 2303
79IC7SOFTWAREPRO N:161 , SER N:162 , SER N:163 , HOH N:2403BINDING SITE FOR RESIDUE SO4 N 2306
80IC8SOFTWAREGLU O:23 , GLU O:56 , HIS O:59 , GLU O:132 , HOH O:2450BINDING SITE FOR RESIDUE FE2 O 200
81IC9SOFTWAREGLU O:56 , GLU O:99 , GLU O:132 , HIS O:135BINDING SITE FOR RESIDUE FE2 O 201
82JC1SOFTWAREHOH F:9447 , SER O:144 , ASN O:148BINDING SITE FOR RESIDUE SO4 O 2403
83JC2SOFTWAREPRO O:161 , SER O:162 , SER O:163BINDING SITE FOR RESIDUE SO4 O 2406
84JC3SOFTWAREGLU P:23 , GLU P:56 , HIS P:59 , GLU P:132 , HOH P:2550BINDING SITE FOR RESIDUE FE2 P 200
85JC4SOFTWAREGLU P:56 , GLU P:99 , GLU P:132 , HIS P:135BINDING SITE FOR RESIDUE FE2 P 201
86JC5SOFTWARELYS P:50 , SER P:163 , THR P:164 , FEC P:2507 , HOH P:9204 , HOH P:9364BINDING SITE FOR RESIDUE SO4 P 2501
87JC6SOFTWARESER P:144 , LYS P:147 , ASN P:148BINDING SITE FOR RESIDUE SO4 P 2503
88JC7SOFTWAREPRO P:161 , SER P:162 , SER P:163BINDING SITE FOR RESIDUE SO4 P 2506
89JC8SOFTWAREARG A:20 , HIS A:28 , TYR A:35 , LYS A:50 , MET A:57 , GLU A:61 , SER A:168 , LYS A:169 , HOH A:1015 , HOH A:1017 , ARG B:20 , HIS B:28 , MET B:31 , TYR B:35 , LYS B:50 , MET B:57 , GLU B:61 , SER B:168 , SO4 B:1101 , HOH B:1220BINDING SITE FOR RESIDUE FEC A 1007
90JC9SOFTWAREARG C:20 , ILE C:27 , HIS C:28 , MET C:31 , TYR C:35 , LYS C:50 , MET C:57 , ARG C:58 , GLU C:61 , SER C:168 , LYS C:169 , HOH C:313 , HOH C:316 , SO4 C:1201 , ARG D:20 , HIS D:28 , MET D:31 , TYR D:35 , LYS D:50 , MET D:57 , GLU D:61 , SER D:168BINDING SITE FOR RESIDUE FEC C 1207
91KC1SOFTWAREARG E:20 , HIS E:28 , MET E:31 , TYR E:35 , LYS E:50 , ILE E:54 , MET E:57 , GLU E:61 , ALA E:167 , SER E:168 , LYS E:169 , HOH E:433 , HOH E:436 , ARG F:20 , HIS F:28 , TYR F:35 , LYS F:50 , MET F:57 , GLU F:61 , SER F:168 , LYS F:169 , SO4 F:1501 , HOH F:9695BINDING SITE FOR RESIDUE FEC E 1407
92KC2SOFTWAREARG G:20 , HIS G:28 , MET G:31 , TYR G:35 , LYS G:50 , MET G:57 , GLU G:61 , SER G:168 , LYS G:169 , HOH G:561 , HOH G:564 , ARG H:20 , HIS H:28 , MET H:31 , TYR H:35 , LYS H:50 , MET H:57 , GLU H:61 , SER H:168 , LYS H:169 , HOH H:9269BINDING SITE FOR RESIDUE FEC G 1607
93KC3SOFTWAREARG I:20 , HIS I:28 , MET I:31 , TYR I:35 , LYS I:50 , MET I:57 , GLU I:61 , ALA I:167 , SER I:168 , LYS I:169 , HOH I:704 , HOH I:707 , HOH I:9611 , ARG J:20 , HIS J:28 , MET J:31 , TYR J:35 , LYS J:50 , MET J:57 , ARG J:58 , GLU J:61 , ALA J:167 , SER J:168 , SO4 J:1901BINDING SITE FOR RESIDUE FEC I 1805
94KC4SOFTWAREARG K:20 , HIS K:28 , MET K:31 , TYR K:35 , LYS K:50 , ILE K:54 , MET K:57 , GLU K:61 , SER K:168 , ARG L:20 , ILE L:27 , HIS L:28 , MET L:31 , TYR L:35 , LYS L:50 , MET L:57 , GLU L:61 , SER L:168 , LYS L:169 , HOH L:868 , HOH L:871 , HOH L:9452 , HOH L:9612 , HOH L:9620 , HOH L:9682BINDING SITE FOR RESIDUE FEC L 2107
95KC5SOFTWAREARG M:20 , HIS M:28 , MET M:31 , TYR M:35 , LYS M:50 , MET M:57 , ARG M:58 , GLU M:61 , SER M:168 , LYS M:169 , HOH M:8936 , HOH M:8939 , HOH M:9332 , HOH M:9603 , ARG N:20 , HIS N:28 , MET N:31 , TYR N:35 , LYS N:50 , MET N:57 , GLU N:61 , ALA N:167 , SER N:168 , LYS N:169BINDING SITE FOR RESIDUE FEC M 2207
96KC6SOFTWAREARG O:20 , HIS O:28 , MET O:31 , TYR O:35 , LYS O:50 , MET O:57 , GLU O:61 , SER O:168 , ARG P:20 , HIS P:28 , MET P:31 , TYR P:35 , LYS P:50 , MET P:57 , GLU P:61 , ALA P:167 , SER P:168 , LYS P:169 , SO4 P:2501 , HOH P:9091 , HOH P:9093 , HOH P:9570BINDING SITE FOR RESIDUE FEC P 2507

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1NF4)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1NF4)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1NF4)

(-) PROSITE Motifs  (1, 16)

Asymmetric Unit (1, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERRITIN_LIKEPS50905 Ferritin-like diiron domain profile.BFR_DESDA6-150
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
  16A:6-150
B:6-150
C:6-150
D:6-150
E:6-150
F:6-150
G:6-150
H:6-150
I:6-150
J:6-150
K:6-150
L:6-150
M:6-150
N:6-150
O:6-150
P:6-150
Biological Unit 1 (1, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERRITIN_LIKEPS50905 Ferritin-like diiron domain profile.BFR_DESDA6-150
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
  16A:6-150
B:6-150
C:6-150
D:6-150
E:6-150
F:6-150
G:6-150
H:6-150
I:6-150
J:6-150
K:6-150
L:6-150
M:6-150
N:6-150
O:6-150
P:6-150
Biological Unit 2 (1, 24)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERRITIN_LIKEPS50905 Ferritin-like diiron domain profile.BFR_DESDA6-150
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
  24A:6-150
B:6-150
-
-
-
-
G:6-150
H:6-150
I:6-150
J:6-150
-
-
M:6-150
N:6-150
-
-
Biological Unit 3 (1, 24)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FERRITIN_LIKEPS50905 Ferritin-like diiron domain profile.BFR_DESDA6-150
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
  24-
-
C:6-150
D:6-150
E:6-150
F:6-150
-
-
-
-
K:6-150
L:6-150
-
-
O:6-150
P:6-150

(-) Exons   (0, 0)

(no "Exon" information available for 1NF4)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4a_ A: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4A00 A:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: A:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 A   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain B from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4b_ B: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4B00 B:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: B:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 B   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain C from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4c_ C: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4C00 C:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: C:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 C   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain D from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4d_ D: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4D00 D:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: D:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 D   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain E from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4e_ E: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4E00 E:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: E:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 E   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain F from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4f_ F: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4F00 F:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: F:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 F   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain G from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4g_ G: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4G00 G:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: G:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 G   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain H from PDB  Type:PROTEIN  Length:170
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:170
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172
            BFR_DESDA     3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4h_ H: Bacterioferritin (cytochrome b1)                                                                                                                                SCOP domains
               CATH domains 1nf4H00 H:3-172  [code=1.20.1260.10, no name defined]                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---FERRITIN_LIKE  PDB: H:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 H   3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172

Chain I from PDB  Type:PROTEIN  Length:170
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:170
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172
            BFR_DESDA     3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4i_ I: Bacterioferritin (cytochrome b1)                                                                                                                                SCOP domains
               CATH domains 1nf4I00 I:3-172  [code=1.20.1260.10, no name defined]                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---FERRITIN_LIKE  PDB: I:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 I   3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172

Chain J from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4j_ J: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4J00 J:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: J:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 J   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain K from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4k_ K: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4K00 K:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: K:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 K   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain L from PDB  Type:PROTEIN  Length:170
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:170
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172
            BFR_DESDA     3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4l_ L: Bacterioferritin (cytochrome b1)                                                                                                                                SCOP domains
               CATH domains 1nf4L00 L:3-172  [code=1.20.1260.10, no name defined]                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---FERRITIN_LIKE  PDB: L:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 L   3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172

Chain M from PDB  Type:PROTEIN  Length:170
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:170
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172
            BFR_DESDA     3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4m_ M: Bacterioferritin (cytochrome b1)                                                                                                                                SCOP domains
               CATH domains 1nf4M00 M:3-172  [code=1.20.1260.10, no name defined]                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---FERRITIN_LIKE  PDB: M:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 M   3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172

Chain N from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4n_ N: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4N00 N:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: N:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 N   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain O from PDB  Type:PROTEIN  Length:169
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:169
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         
            BFR_DESDA     4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4o_ O: Bacterioferritin (cytochrome b1)                                                                                                                               SCOP domains
               CATH domains 1nf4O00 O:4-172  [code=1.20.1260.10, no name defined]                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --FERRITIN_LIKE  PDB: O:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 O   4 NREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163         

Chain P from PDB  Type:PROTEIN  Length:170
 aligned with BFR_DESDA | Q93PP9 from UniProtKB/Swiss-Prot  Length:179

    Alignment length:170
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172
            BFR_DESDA     3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
               SCOP domains d1nf4p_ P: Bacterioferritin (cytochrome b1)                                                                                                                                SCOP domains
               CATH domains 1nf4P00 P:3-172  [code=1.20.1260.10, no name defined]                                                                                                                      CATH domains
           Pfam domains (1) ----------Ferritin-1nf4P01 P:13-149                                                                                                                ----------------------- Pfam domains (1)
           Pfam domains (2) ----------Ferritin-1nf4P02 P:13-149                                                                                                                ----------------------- Pfam domains (2)
           Pfam domains (3) ----------Ferritin-1nf4P03 P:13-149                                                                                                                ----------------------- Pfam domains (3)
           Pfam domains (4) ----------Ferritin-1nf4P04 P:13-149                                                                                                                ----------------------- Pfam domains (4)
           Pfam domains (5) ----------Ferritin-1nf4P05 P:13-149                                                                                                                ----------------------- Pfam domains (5)
           Pfam domains (6) ----------Ferritin-1nf4P06 P:13-149                                                                                                                ----------------------- Pfam domains (6)
           Pfam domains (7) ----------Ferritin-1nf4P07 P:13-149                                                                                                                ----------------------- Pfam domains (7)
           Pfam domains (8) ----------Ferritin-1nf4P08 P:13-149                                                                                                                ----------------------- Pfam domains (8)
           Pfam domains (9) ----------Ferritin-1nf4P09 P:13-149                                                                                                                ----------------------- Pfam domains (9)
          Pfam domains (10) ----------Ferritin-1nf4P10 P:13-149                                                                                                                ----------------------- Pfam domains (10)
          Pfam domains (11) ----------Ferritin-1nf4P11 P:13-149                                                                                                                ----------------------- Pfam domains (11)
          Pfam domains (12) ----------Ferritin-1nf4P12 P:13-149                                                                                                                ----------------------- Pfam domains (12)
          Pfam domains (13) ----------Ferritin-1nf4P13 P:13-149                                                                                                                ----------------------- Pfam domains (13)
          Pfam domains (14) ----------Ferritin-1nf4P14 P:13-149                                                                                                                ----------------------- Pfam domains (14)
          Pfam domains (15) ----------Ferritin-1nf4P15 P:13-149                                                                                                                ----------------------- Pfam domains (15)
          Pfam domains (16) ----------Ferritin-1nf4P16 P:13-149                                                                                                                ----------------------- Pfam domains (16)
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---FERRITIN_LIKE  PDB: P:6-150 UniProt: 6-150                                                                                                       ---------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nf4 P   3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGFV 172
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 16)

Asymmetric Unit

(-) CATH Domains  (1, 16)

Asymmetric Unit
1a1nf4A00A:4-172
1b1nf4B00B:4-172
1c1nf4C00C:4-172
1d1nf4D00D:4-172
1e1nf4E00E:4-172
1f1nf4F00F:4-172
1g1nf4G00G:4-172
1h1nf4J00J:4-172
1i1nf4K00K:4-172
1j1nf4N00N:4-172
1k1nf4O00O:4-172
1l1nf4H00H:3-172
1m1nf4I00I:3-172
1n1nf4L00L:3-172
1o1nf4M00M:3-172
1p1nf4P00P:3-172

(-) Pfam Domains  (1, 16)

Asymmetric Unit
(-)
Clan: Ferritin (185)

(-) Gene Ontology  (11, 11)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P   (BFR_DESDA | Q93PP9)
molecular function
    GO:0008199    ferric iron binding    Interacting selectively and non-covalently with ferric iron, Fe(III).
    GO:0004322    ferroxidase activity    Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0003674    molecular_function    Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0006879    cellular iron ion homeostasis    Any process involved in the maintenance of an internal steady state of iron ions at the level of a cell.
    GO:0006880    intracellular sequestering of iron ion    The process of binding or confining iron ions in an intracellular area such that they are separated from other components of a biological system.
    GO:0006826    iron ion transport    The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005623    cell    The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
    GO:0005575    cellular_component    The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BFR_DESDA | Q93PP91nf6 1nfv

(-) Related Entries Specified in the PDB File

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