|
|
|
|
|
|
Summary Information (see also Sequences/Alignments below) |
(no "Ligand,Modified Residues,Ions" information available for 1KOO) |
(no "Site" information available for 1KOO) |
(no "SS Bond" information available for 1KOO) |
(no "Cis Peptide Bond" information available for 1KOO) |
(no "SAP(SNP)/Variant" information available for 1KOO) |
Asymmetric Unit (1, 12)
|
Asymmetric UnitChain A from PDB Type:PROTEIN Length:258 aligned with NXF1_HUMAN | Q9UBU9 from UniProtKB/Swiss-Prot Length:619 Alignment length:258 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 NXF1_HUMAN 105 RGGAGTSQDGTSKNWFKITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAF 362 SCOP domains d1kooa2 A:105-200 mRNA export factor tap d1kooa1 A:201-362 mRNA export factor tap SCOP domains CATH domains 1kooA01 A:105-201 [code=3.30.70.330, no name defined] 1kooA02 A:202-362 Ribonuclease Inhibitor CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------LRR PDB: A:266-287 ----LRR PDB: A:292-313 --LRR PDB: A:316-337 ------------------------- PROSITE Transcript 1 (1) Exon 1.4g Exon 1.5b PDB: A:124-151 Exon 1.6c PDB: A:152-186 Exon 1.7 PDB: A:187-213 Exon 1.8 PDB: A:214-237-----------------------------Exon 1.10 PDB: A:267-302 Exon 1.11a PDB: A:303-339 ------------Exon 1.12 Transcript 1 (1) Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------Exon 1.9 PDB: A:237-266 ------------------------------------------------------------------------Exon 1.11g ----------- Transcript 1 (2) 1koo A 105 RGGAGTSQDGTSKNWFKITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAF 362 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 Chain B from PDB Type:PROTEIN Length:165 aligned with NXF1_HUMAN | Q9UBU9 from UniProtKB/Swiss-Prot Length:619 Alignment length:165 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 NXF1_HUMAN 203 ELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAP 367 SCOP domains d1koob_ B: mRNA export factor tap SCOP domains CATH domains 1kooB00 B:203-367 Ribonuclease Inhibitor CATH domains Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ---------------------------------------------------------------LRR PDB: B:266-287 ----LRR PDB: B:292-313 --LRR PDB: B:316-337 ------------------------------ PROSITE Transcript 1 (1) Exon 1.7 Exon 1.8 PDB: B:214-237-----------------------------Exon 1.10 PDB: B:267-302 Exon 1.11a PDB: B:303-339 ------------Exon 1.12 Transcript 1 (1) Transcript 1 (2) ----------------------------------Exon 1.9 PDB: B:237-266 ------------------------------------------------------------------------Exon 1.11g ---------------- Transcript 1 (2) 1koo B 203 ELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAP 367 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 Chain C from PDB Type:PROTEIN Length:262 aligned with NXF1_HUMAN | Q9UBU9 from UniProtKB/Swiss-Prot Length:619 Alignment length:262 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 NXF1_HUMAN 101 APPERGGAGTSQDGTSKNWFKITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAF 362 SCOP domains d1kooc2 C:101-200 mRNA export factor tap d1kooc1 C:201-362 mRNA export factor tap SCOP domains CATH domains 1kooC01 C:101-201 [code=3.30.70.330, no name defined] 1kooC02 C:202-362 Ribonuclease Inhibitor CATH domains Pfam domains (1) ------------Tap-RNA_bind-1kooC01 C:113-200 ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains (1) Pfam domains (2) ------------Tap-RNA_bind-1kooC02 C:113-200 ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains (2) SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------LRR PDB: C:266-287 ----LRR PDB: C:292-313 --LRR PDB: C:316-337 ------------------------- PROSITE Transcript 1 (1) Exon 1.4g [INCOMPLETE] Exon 1.5b PDB: C:124-151 Exon 1.6c PDB: C:152-186 Exon 1.7 PDB: C:187-213 Exon 1.8 PDB: C:214-237-----------------------------Exon 1.10 PDB: C:267-302 Exon 1.11a PDB: C:303-339 ------------Exon 1.12 Transcript 1 (1) Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------Exon 1.9 PDB: C:237-266 ------------------------------------------------------------------------Exon 1.11g ----------- Transcript 1 (2) 1koo C 101 APPERGGAGTSQDGTSKNWFKITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAF 362 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 Chain D from PDB Type:PROTEIN Length:169 aligned with NXF1_HUMAN | Q9UBU9 from UniProtKB/Swiss-Prot Length:619 Alignment length:169 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 NXF1_HUMAN 204 LKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAPTTLPP 372 SCOP domains d1kood_ D: mRNA export factor tap SCOP domains CATH domains 1kooD00 D:204-372 Ribonuclease Inhibitor CATH domains Pfam domains (1) ----------------------------------------------------------------------------------------LRR_1-1kooD01 D:292-315 --------------------------------------------------------- Pfam domains (1) Pfam domains (2) ----------------------------------------------------------------------------------------LRR_1-1kooD02 D:292-315 --------------------------------------------------------- Pfam domains (2) Pfam domains (3) ----------------------------------------------------------------------------------------LRR_1-1kooD03 D:292-315 --------------------------------------------------------- Pfam domains (3) Pfam domains (4) ----------------------------------------------------------------------------------------LRR_1-1kooD04 D:292-315 --------------------------------------------------------- Pfam domains (4) SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE --------------------------------------------------------------LRR PDB: D:266-287 ----LRR PDB: D:292-313 --LRR PDB: D:316-337 ----------------------------------- PROSITE Transcript 1 (1) Exon 1.7 Exon 1.8 PDB: D:214-237-----------------------------Exon 1.10 PDB: D:267-302 Exon 1.11a PDB: D:303-339 ------------Exon 1.12 Transcript 1 (1) Transcript 1 (2) ---------------------------------Exon 1.9 PDB: D:237-266 ------------------------------------------------------------------------Exon 1.11g --------------------- Transcript 1 (2) 1koo D 204 LKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAPTTLPP 372 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363
|
Asymmetric Unit
|
Asymmetric Unit
|
Asymmetric Unit
|
Asymmetric Unit(hide GO term definitions) Chain A,B,C,D (NXF1_HUMAN | Q9UBU9)
|
|
|
|
|
|
|