Chain A from PDB Type:PROTEIN Length:144
aligned with TN13B_HUMAN | Q9Y275 from UniProtKB/Swiss-Prot Length:285
Alignment length:144
151 161 171 181 191 201 211 221 231 241 251 261 271 281
TN13B_HUMAN 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
SCOP domains d1kd7a_ A: Soluble part of TALL-1, sTALL-1 (BAFF) SCOP domains
CATH domains 1kd7A00 A:142-285 [code=2.60.120.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....eeeeee......eee..eee..eeeeeee....ee....ee....eeeeeeeeeee.....eeeeeeeee..........eeeeeeeeee.......eeeeeeeeeee....eeeee...............eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------TNF_2 PDB: A:148-284 UniProt: 148-284 - PROSITE
Transcript 1 (1) 1------------------Exon 1.5a PDB: A:161-198 Exon 1.5c PDB: A:199-249 UniProt: 199-249 ------------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.3 ---------------------------------------------------------------------------------------Exon 1.6c PDB: A:249-285 Transcript 1 (2)
1kd7 A 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
151 161 171 181 191 201 211 221 231 241 251 261 271 281
Chain B from PDB Type:PROTEIN Length:144
aligned with TN13B_HUMAN | Q9Y275 from UniProtKB/Swiss-Prot Length:285
Alignment length:144
151 161 171 181 191 201 211 221 231 241 251 261 271 281
TN13B_HUMAN 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
SCOP domains d1kd7b_ B: Soluble part of TALL-1, sTALL-1 (BAFF) SCOP domains
CATH domains 1kd7B00 B:142-285 [code=2.60.120.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....eeeeee......eee..eee..eeeeeee....ee....ee....eeeeeeeeeee.....eeeeeeeee..........eeeeeeeeee.......eeeeeeeeeee....eeeee...............eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------TNF_2 PDB: B:148-284 UniProt: 148-284 - PROSITE
Transcript 1 (1) 1------------------Exon 1.5a PDB: B:161-198 Exon 1.5c PDB: B:199-249 UniProt: 199-249 ------------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.3 ---------------------------------------------------------------------------------------Exon 1.6c PDB: B:249-285 Transcript 1 (2)
1kd7 B 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
151 161 171 181 191 201 211 221 231 241 251 261 271 281
Chain C from PDB Type:PROTEIN Length:144
aligned with TN13B_HUMAN | Q9Y275 from UniProtKB/Swiss-Prot Length:285
Alignment length:144
151 161 171 181 191 201 211 221 231 241 251 261 271 281
TN13B_HUMAN 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
SCOP domains d1kd7c_ C: Soluble part of TALL-1, sTALL-1 (BAFF) SCOP domains
CATH domains 1kd7C00 C:142-285 [code=2.60.120.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....eeeeee......eee..eee..eeeeeee....ee....ee....eeeeeeeeeee.....eeeeeeeee..........eeeeeeeeee.......eeeeeeeeeee....eeeeee..............eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------TNF_2 PDB: C:148-284 UniProt: 148-284 - PROSITE
Transcript 1 (1) 1------------------Exon 1.5a PDB: C:161-198 Exon 1.5c PDB: C:199-249 UniProt: 199-249 ------------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.3 ---------------------------------------------------------------------------------------Exon 1.6c PDB: C:249-285 Transcript 1 (2)
1kd7 C 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
151 161 171 181 191 201 211 221 231 241 251 261 271 281
Chain K from PDB Type:PROTEIN Length:144
aligned with TN13B_HUMAN | Q9Y275 from UniProtKB/Swiss-Prot Length:285
Alignment length:144
151 161 171 181 191 201 211 221 231 241 251 261 271 281
TN13B_HUMAN 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
SCOP domains d1kd7k_ K: Soluble part of TALL-1, sTALL-1 (BAFF) SCOP domains
CATH domains 1kd7K00 K:142-285 [code=2.60.120.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....eeeeee......eee..eee..eeeeeee....ee....ee....eeeeeeeeeee.....eeeeeeeee..........eeeeeeeeee.......eeeeeeeeeee....eeeeee..............eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------TNF_2 PDB: K:148-284 UniProt: 148-284 - PROSITE
Transcript 1 (1) 1------------------Exon 1.5a PDB: K:161-198 Exon 1.5c PDB: K:199-249 UniProt: 199-249 ------------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.3 ---------------------------------------------------------------------------------------Exon 1.6c PDB: K:249-285 Transcript 1 (2)
1kd7 K 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
151 161 171 181 191 201 211 221 231 241 251 261 271 281
Chain L from PDB Type:PROTEIN Length:144
aligned with TN13B_HUMAN | Q9Y275 from UniProtKB/Swiss-Prot Length:285
Alignment length:144
151 161 171 181 191 201 211 221 231 241 251 261 271 281
TN13B_HUMAN 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
SCOP domains d1kd7l_ L: Soluble part of TALL-1, sTALL-1 (BAFF) SCOP domains
CATH domains 1kd7L00 L:142-285 [code=2.60.120.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....eeeeee......eee..eee..eeeeeee....ee....ee....eeeeeeeeeee.....eeeeeeeee..........eeeeeeeeee.......eeeeeeeeeee....eeeeee..............eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------TNF_2 PDB: L:148-284 UniProt: 148-284 - PROSITE
Transcript 1 (1) 1------------------Exon 1.5a PDB: L:161-198 Exon 1.5c PDB: L:199-249 UniProt: 199-249 ------------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.3 ---------------------------------------------------------------------------------------Exon 1.6c PDB: L:249-285 Transcript 1 (2)
1kd7 L 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
151 161 171 181 191 201 211 221 231 241 251 261 271 281
Chain M from PDB Type:PROTEIN Length:144
aligned with TN13B_HUMAN | Q9Y275 from UniProtKB/Swiss-Prot Length:285
Alignment length:144
151 161 171 181 191 201 211 221 231 241 251 261 271 281
TN13B_HUMAN 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
SCOP domains d1kd7m_ M: Soluble part of TALL-1, sTALL-1 (BAFF) SCOP domains
CATH domains 1kd7M00 M:142-285 [code=2.60.120.40, no name defined] CATH domains
Pfam domains (1) --------------------------TNF-1kd7M01 M:168-284 - Pfam domains (1)
Pfam domains (2) --------------------------TNF-1kd7M02 M:168-284 - Pfam domains (2)
Pfam domains (3) --------------------------TNF-1kd7M03 M:168-284 - Pfam domains (3)
Pfam domains (4) --------------------------TNF-1kd7M04 M:168-284 - Pfam domains (4)
Pfam domains (5) --------------------------TNF-1kd7M05 M:168-284 - Pfam domains (5)
Pfam domains (6) --------------------------TNF-1kd7M06 M:168-284 - Pfam domains (6)
Sec.struct. author ....eeeeee......eee..eee..eeeeeee....ee....ee....eeeeeeeeeee.....eeeeeeeee..........eeeeeeeeee.......eeeeeeeeeee....eeeeee..............eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------TNF_2 PDB: M:148-284 UniProt: 148-284 - PROSITE
Transcript 1 (1) 1------------------Exon 1.5a PDB: M:161-198 Exon 1.5c PDB: M:199-249 UniProt: 199-249 ------------------------------------ Transcript 1 (1)
Transcript 1 (2) Exon 1.3 ---------------------------------------------------------------------------------------Exon 1.6c PDB: M:249-285 Transcript 1 (2)
1kd7 M 142 VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL 285
151 161 171 181 191 201 211 221 231 241 251 261 271 281
Legend: |
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→ Mismatch |
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(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |