Chain A from PDB Type:PROTEIN Length:407
aligned with HSLU_ECOLI | P0A6H5 from UniProtKB/Swiss-Prot Length:443
Alignment length:442
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441
HSLU_ECOLI 2 SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL 443
SCOP domains d1do2a_ A: HslU SCOP domains
CATH domains 1do2A01 A:2-109,A:244-332 P-loop containing nucleotide triphosphate hydrolases 1do2A02 A:110-243 DNA helicase RuvA subunit, C-terminal domain 1do2A01 A:2-109,A:244-332 P-loop containing nucleotide triphosphate hydrolases --1do2A03 A:335-442 [code=1.10.8.60, no name defined] - CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeee......hhhhhhhhhhhhh..eeeee..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.......ee.-----------------------------------....ee.hhhhhhhhhhhhh.....hhhhhhhhhhhhhhh..eeeee.............hhhhhhhhhhhhhhhhhh.eeee..eeee....eeeee...........hhhhhhhh.eeee....hhhhhhhhh.....hhhhhhhhhhhh...eeeehhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.......eeeehhhhhhhhhhhhhhh.hhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1do2 A 2 SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIE-----------------------------------KQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL 443
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 | - - - 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441
174 210
Chain B from PDB Type:PROTEIN Length:407
aligned with HSLU_ECOLI | P0A6H5 from UniProtKB/Swiss-Prot Length:443
Alignment length:442
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441
HSLU_ECOLI 2 SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL 443
SCOP domains d1do2b_ B: HslU SCOP domains
CATH domains 1do2B01 B:2-109,B:244-332 P-loop containing nucleotide triphosphate hydrolases 1do2B02 B:110-243 DNA helicase RuvA subunit, C-terminal domain 1do2B01 B:2-109,B:244-332 P-loop containing nucleotide triphosphate hydrolases --1do2B03 B:335-442 [code=1.10.8.60, no name defined] - CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh..hhhhhh......eeee.....hhhhhhhhhhhhh...eeeee.hhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh...........................................-----------------------------------.......hhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..eeeeehhhhhh..........hhhhhhhhhhhhhhh.eee....eee....eeee............hhhhhh....eee....hhhhhhhhh.....hhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.......eeeehhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1do2 B 2 SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIE-----------------------------------KQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL 443
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 | - - - 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441
174 210
Chain C from PDB Type:PROTEIN Length:407
aligned with HSLU_ECOLI | P0A6H5 from UniProtKB/Swiss-Prot Length:443
Alignment length:442
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441
HSLU_ECOLI 2 SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL 443
SCOP domains d1do2c_ C: HslU SCOP domains
CATH domains 1do2C01 C:2-109,C:244-332 P-loop containing nucleotide triphosphate hydrolases 1do2C02 C:110-243 DNA helicase RuvA subunit, C-terminal domain 1do2C01 C:2-109,C:244-332 P-loop containing nucleotide triphosphate hydrolases --1do2C03 C:335-442 [code=1.10.8.60, no name defined] - CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeee......hhhhhhhhhhhhh..eeeee..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh..........-----------------------------------.......hhhhhhhhhhhhh.....hhhhhhhhhhhhhhh..eeeee.............hhhhhhhhhhhhhhhhhh.eeee..eeee....eeeee......hhhhhhhhhhhhh.eeee....hhhhhhhhh.....hhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.......eeeehhhhhhhhhhhhhhh.hhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1do2 C 2 SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIE-----------------------------------KQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL 443
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 | - - - 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441
174 210
Chain D from PDB Type:PROTEIN Length:407
aligned with HSLU_ECOLI | P0A6H5 from UniProtKB/Swiss-Prot Length:443
Alignment length:442
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441
HSLU_ECOLI 2 SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL 443
SCOP domains d1do2d_ D: HslU SCOP domains
CATH domains 1do2D01 D:2-109,D:244-332 P-loop containing nucleotide triphosphate hydrolases 1do2D02 D:110-243 DNA helicase RuvA subunit, C-terminal domain 1do2D01 D:2-109,D:244-332 P-loop containing nucleotide triphosphate hydrolases --1do2D03 D:335-442 [code=1.10.8.60, no name defined] - CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh..hhhhhh......eeee.....hhhhhhhhhhhhh...eeeee.hhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh.............................................-----------------------------------.......hhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..eeeeehhhhhh..........hhhhhhhhhhhhhh................eeee............hhhhhh....eee....hhhhhhhhh.....hhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.......eeeehhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1do2 D 2 SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIE-----------------------------------KQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL 443
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 | - - - 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441
174 210
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |