1W4O - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   BINDING OF NONNATURAL 3'-NUCLEOTIDES TO RIBONUCLEASE A

Authors :   C. L. Jenkins, N. Thiyagarajan, R. Y. Sweeney, M. P. Guy, B. R. Kelemen, K. R. Acharya, R. T. Raines

Date :   27 Jul 04 (Deposition) - 02 Feb 05 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.60

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Ribonuclease A, Nonatural 3'-Nucleotides, Hydrolase, Nuclease, Endonuclease (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. L. Jenkins, N. Thiyagarajan, R. Y. Sweeney, M. P. Guy, B. R. Kelemen, K. R. Acharya, R. T. Raines
Binding Of Non-Natural 3'-Nucleotides To Ribonuclease A
Febs J. V. 272 744 2005
PubMed-ID: 15670155 | Reference-DOI: 10.1111/J.1742-4658.2004.04511.X

Molecule 1 - PANCREATIC RIBONUCLEASE A
	Chains	:	A, B
	EC Number	:	3.1.27.5
	Organ	:	PANCREAS
	Organism Common	:	BOVINE
	Organism Scientific	:	BOS TAURUS
	Organism Taxid	:	9913
	Other Details	:	ARABINOURIDINE 3'-PHOSPHATE
	Synonym	:	RNASE 1, RNASE A

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 1)

No.	Name	Count	Type	Full Name
1	UA3	1	Ligand/Ion	URACIL ARABINOSE-3'-PHOSPHATE

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	UA3	1	Ligand/Ion	URACIL ARABINOSE-3'-PHOSPHATE

Biological Unit 2 (0, 0)

No.	Name	Count	Type	Full Name
1	UA3	-1	Ligand/Ion	URACIL ARABINOSE-3'-PHOSPHATE

Asymmetric Unit (1, 1)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLN A:11 , HIS A:12 , LYS A:41 , VAL A:43 , ASN A:44 , THR A:45 , HIS A:119 , PHE A:120 , HOH A:2019 , HOH A:2032 , HOH A:2036 , HOH A:2094 , HOH A:2095	BINDING SITE FOR RESIDUE UA3 A1125

Asymmetric Unit

No.	Residues
1	A:26	-	A:84
2	A:40	-	A:95
3	A:58	-	A:110
4	A:65	-	A:72
5	B:26	-	B:84
6	B:40	-	B:95
7	B:58	-	B:110
8	B:65	-	B:72

Asymmetric Unit

No.	Residues
1	Tyr A:92	-	Pro A:93
2	Asn A:113	-	Pro A:114
3	Tyr B:92	-	Pro B:93
4	Asn B:113	-	Pro B:114

(no "SAP(SNP)/Variant" information available for 1W4O)

Asymmetric Unit (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RNASE_PANCREATIC	PS00127	Pancreatic ribonuclease family signature.	RNAS1_BOVIN	66-72	2	A:40-46 B:40-46

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RNASE_PANCREATIC	PS00127	Pancreatic ribonuclease family signature.	RNAS1_BOVIN	66-72	1	A:40-46 -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RNASE_PANCREATIC	PS00127	Pancreatic ribonuclease family signature.	RNAS1_BOVIN	66-72	1	- B:40-46

Asymmetric Unit (1, 2)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSBTAT00000011586	1	ENSBTAE00000400684	chr10:25757929-25757973	45	RNAS1_BOVIN	-	0	0	-	-
1.2	ENSBTAT00000011586	2	ENSBTAE00000093931	chr10:25758709-25759510	802	RNAS1_BOVIN	1-159	159	2	A:1-124 B:1-124	124 124

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:124
 aligned with RNAS1_BOVIN | P61823 from UniProtKB/Swiss-Prot  Length:150

    Alignment length:124
                                    36        46        56        66        76        86        96       106       116       126       136       146    
          RNAS1_BOVIN    27 KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV 150
               SCOP domains d1w4oa_ A: automated matches                                                                                                 SCOP domains
               CATH domains 1w4oA00 A:1-124 P-30 Protein                                                                                                 CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh..........hhhhhhhhhh.........eeeee..hhhhhhhhhhheee........eee....eeeeeeee..........eeeeeeeeeeeeeee....eeeeeeeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------RNASE_P------------------------------------------------------------------------------ PROSITE
               Transcript 1 Exon 1.2  PDB: A:1-124 UniProt: 1-159 [INCOMPLETE]                                                                           Transcript 1
                 1w4o A   1 KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV 124
                                    10        20        30        40        50        60        70        80        90       100       110       120

Chain B from PDB  Type:PROTEIN  Length:124
 aligned with RNAS1_BOVIN | P61823 from UniProtKB/Swiss-Prot  Length:150

    Alignment length:124
                                    36        46        56        66        76        86        96       106       116       126       136       146    
          RNAS1_BOVIN    27 KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV 150
               SCOP domains d1w4ob_ B: automated matches                                                                                                 SCOP domains
               CATH domains 1w4oB00 B:1-124 P-30 Protein                                                                                                 CATH domains
           Pfam domains (1) RnaseA-1w4oB01 B:1-121                                                                                                   --- Pfam domains (1)
           Pfam domains (2) RnaseA-1w4oB02 B:1-121                                                                                                   --- Pfam domains (2)
         Sec.struct. author ..hhhhhhhhhhh..........hhhhhhhhhh.........eeeee..hhhhhhhhhhheee........eee....eeeeeeee..........eeeeeeeeeeeeeee....eeeeeeeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------RNASE_P------------------------------------------------------------------------------ PROSITE
               Transcript 1 Exon 1.2  PDB: B:1-124 UniProt: 1-159 [INCOMPLETE]                                                                           Transcript 1
                 1w4o B   1 KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV 124
                                    10        20        30        40        50        60        70        80        90       100       110       120

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: RNase A-like (356)

Superfamily: RNase A-like (356)

Family: Ribonuclease A-like (347)

Protein domain: automated matches (86)

Cow (Bos taurus) [TaxId: 9913] (70)

1a	d1w4oa_	A:
1b	d1w4ob_	B:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Roll (3276)

Topology: P-30 Protein (299)

Homologous Superfamily: P-30 Protein (299)

Bovine (Bos taurus) (46)

1a	1w4oA00	A:1-124
1b	1w4oB00	B:1-124

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: RnaseA] (125)

Family: RnaseA (125)

Bos taurus (Bovine) (107)

1a	RnaseA-1w4oB01	B:1-121
1b	RnaseA-1w4oB02	B:1-121

Asymmetric Unit(hide GO term definitions)

Chain A,B (RNAS1_BOVIN | P61823)

molecular function
	GO:0004519	endonuclease activity	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0004518	nuclease activity	Catalysis of the hydrolysis of ester linkages within nucleic acids.
	GO:0003676	nucleic acid binding	Interacting selectively and non-covalently with any nucleic acid.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004522	ribonuclease A activity	Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates.
biological process
	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
	GO:0090305	nucleic acid phosphodiester bond hydrolysis	The nucleic acid metabolic process in which the phosphodiester bonds between nucleotides are cleaved by hydrolysis.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		UA3	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Asn A:113 - Pro A:114	[ RasMol ]
		Asn B:113 - Pro B:114	[ RasMol ]
		Tyr A:92 - Pro A:93	[ RasMol ]
		Tyr B:92 - Pro B:93	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	1w4o
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	RNAS1_BOVIN \| P61823
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	3.1.27.5
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	RNAS1_BOVIN \| P61823
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

1a2w	CRYSTAL STRUCTURE OF A 3D DOMAIN-SWAPPED DIMER OF BOVINE PANCREATIC RIBONUCLEASE A
1a5p	C[40,95]A VARIANT OF BOVINE PANCREATIC RIBONUCLEASE A
1a5q	P93A VARIANT OF BOVINE PANCREATIC RIBONUCLEASE A
1afk	CRYSTAL STRUCTURE OF RIBONUCLEASE A IN COMPLEX WITH 5'-DIPHOSPHOADENOSINE-3'- PHOSPHATE
1afl	RIBONUCLEASE A IN COMPLEX WITH 5'- DIPHOSPHOADENOSINE 2'-PHOSPHATE AT 1.7 ANGSTROM RESOLUTION
1afu	STRUCTURE OF RIBONUCLEASE A AT 2.0 ANGSTROMS FROM MONOCLINIC CRYSTALS
1aqp	RIBONUCLEASE A COPPER COMPLEX
1b6v	CRYSTAL STRUCTURE OF A HYBRID BETWEEN RIBONUCLEASE A AND BOVINE SEMINAL RIBONUCLEASE
1bel	HYDROLASE PHOSPHORIC DIESTER, RIBONUCLEIC ACID
1bzq	COMPLEX OF A DROMEDARY SINGLE-DOMAIN VHH ANTIBODY FRAGMENT WITH RNASE A
1c0b	BOVINE PANCREATIC RIBONUCLEASE A DESICCATED FOR 2.5 DAYS
1c0c	BOVINE PANCREATIC RIBONUCLEASE A DESICCATED FOR 4.0 DAYS
1c8w	THR45GLY VARIANT OF RIBONUCLEASE A
1c9v	H12A VARIANT OF RIBONUCLEASE A
1c9x	H119A VARIANT OF RIBONUCLEASE A
1cjq	X-RAY CRYSTALLOGRAPHIC STUDIES OF THE DENATURATION OF THE DENATURATION OF RIBONUCLEASE S.
1cjr	X-RAY CRYSTALLOGRAPHIC STUDIES OF DENATURATION IN RIBONUCLEASE S
1d5d	THE ROLE OF PHENYLALANINE 8 IN THE STABILIZATION OF THE SPROTEIN-S PEPTIDE INTERACTION: PACKING AND CAVITIES
1d5e	THE ROLE OF PHENYLALANINE 8 IN THE STABILIZATION OF THE SPROTEIN-S PEPTIDE INTERACTION: PACKING AND CAVITIES
1d5h	RNASE S(F8A). MUTANT RIBONUCLEASE S.
1dfj	RIBONUCLEASE INHIBITOR COMPLEXED WITH RIBONUCLEASE A
1dy5	DEAMIDATED DERIVATIVE OF BOVINE PANCREATIC RIBONUCLEASE
1eic	CRYSTAL STRUCTURE OF F120A MUTANT OF BOVINE PANCREATICRIBONUCLEASE A
1eid	CRYSTAL STRUCTURE OF F120G MUTANT OF BOVINE PANCREATICRIBONUCLEASE A
1eie	CRYSTAL STRUCTURE OF F120W MUTANT OF BOVINE PANCREATICRIBONUCLEASE A
1eos	CRYSTAL STRUCTURE OF RIBONUCLEASE A COMPLEXED WITH URIDYLYL(2', 5')GUANOSINE (PRODUCTIVE BINDING)
1eow	CRYSTAL STRUCTURE OF RIBONUCLEASE A COMPLEXED WITH URIDYLYL(2', 5')GUANOSINE (NON- PRODUCTIVE BINDING)
1f0v	CRYSTAL STRUCTURE OF AN RNASE A DIMER DISPLAYING A NEW TYPE OF 3D DOMAIN SWAPPING
1fev	CRYSTAL STRUCTURE OF THE ALA4AIB MUTATION IN RNASE S
1fs3	CRYSTAL STRUCTURE OF WILD-TYPE BOVINE PANCREATICRIBONUCLEASE A
1gv7	GUEST-HOST CROSSTALK IN AN ANGIOGENIN/RNASE A CHIMERIC PROTEIN
1izp	F46L MUTANT OF BOVINE PANCREATIC RIBONUCLEASE A
1izq	F46V MUTANT OF BOVINE PANCREATIC RIBONUCLEASE A
1izr	F46A MUTANT OF BOVINE PANCREATIC RIBONUCLEASE A
1j7z	OSMOLYTE STABILIZATION OF RIBONUCLEASE
1j80	OSMOLYTE STABILIZATION OF RNASE
1j81	OSMOLYTE STABILIZATION OF RNASE
1j82	OSMOLYTE STABILIZATION OF RNASE
1jn4	THE CRYSTAL STRUCTURE OF RIBONUCLEASE A IN COMPLEX WITH 2'-DEOXYURIDINE 3'-PYROPHOSPHATE (P'-5') ADENOSINE
1js0	CRYSTAL STRUCTURE OF 3D DOMAIN-SWAPPED RNASE A MINOR TRIMER
1jvt	CRYSTAL STRUCTURE OF RIBONUCLEASE A (LIGAND- FREE FORM)
1jvu	CRYSTAL STRUCTURE OF RIBONUCLEASE A (COMPLEXED FORM)
1jvv	CRYSTAL STRUCTURE OF RIBONUCLEASE A (RETRO- SOAKED FORM)
1kf2	ATOMIC RESOLUTION STRUCTURE OF RNASE A AT PH 5.2
1kf3	ATOMIC RESOLUTION STRUCTURE OF RNASE A AT PH 5.9
1kf4	ATOMIC RESOLUTION STRUCTURE OF RNASE A AT PH 6.3
1kf5	ATOMIC RESOLUTION STRUCTURE OF RNASE A AT PH 7.1
1kf7	ATOMIC RESOLUTION STRUCTURE OF RNASE A AT PH 8.0
1kf8	ATOMIC RESOLUTION STRUCTURE OF RNASE A AT PH 8.8
1kh8	STRUCTURE OF A CIS-PROLINE (P114) TO GLYCINE VARIANT OFRIBONUCLEASE A
1lsq	RIBONUCLEASE A WITH ASN 67 REPLACED BY A BETA-ASPARTYL RESIDUE
1o0f	RNASE A IN COMPLEX WITH 3',5'-ADP
1o0h	RIBONUCLEASE A IN COMPLEX WITH 5'-ADP
1o0m	RIBONUCLEASE A IN COMPLEX WITH URIDINE-2'- PHOSPHATE
1o0n	RIBONUCLEASE A IN COMPLEX WITH URIDINE-3'- PHOSPHATE
1o0o	RIBONUCLEASE A IN COMPLEX WITH ADENOSINE-2 ',5'-DIPHOSPHATE
1qhc	CRYSTAL STRUCTURE OF RIBONUCLEASE A IN COMPLEX WITH 5'- PHOSPHO-2'-DEOXYURIDINE-3 '-PYROPHOSPHATE ADENOSINE-3'- PHOSPHATE
1rar	RIBONUCLEASE A FLUORESCENT DERIVATIVE [RNASE 1 -124 (AENS-HIS -12)] FROM NACL CRYSTAL
1ras	RIBONUCLEASE A FLUORESCENT DERIVATIVE [RNASE 1 -124 (AENS-HIS-12)] FROM AMMONIUM SULFATE CRYSTAL
1rat	RIBONUCLEASE A AT 98K
1rbb	RIBONUCLEASE B
1rbc	RIBONUCLEASE S MUTANT WITH MET 13 REPLACED BY ALA (M13A)
1rbd	RIBONUCLEASE S MUTANT WITH MET 13 REPLACED BY ALPHA-AMINO-NORMAL-BUTYRIC ACID (M13ABA)
1rbe	RIBONUCLEASE S MUTANT WITH MET 13 REPLACED BY PHE (M13F)
1rbf	RIBONUCLEASE S MUTANT WITH MET 13 REPLACED BY GLY (M13G)
1rbg	RIBONUCLEASE S MUTANT WITH MET 13 REPLACED BY ILE (M13I)
1rbh	RIBONUCLEASE S MUTANT WITH MET 13 REPLACED BY LEU (M13L)
1rbi	RIBONUCLEASE S MUTANT WITH MET 13 REPLACED BY VAL (M13V)
1rbj	RIBONUCLEASE B COMPLEX WITH D(TETRA-(DEOXY- ADENYLATE))
1rbn	RIBONUCLEASE A DERIVATIVE II COMPLEXED WITH 6-CHLOROPURINE RIBOSIDE 5'-MONOPHOSPHATE
1rbw	RIBONUCLEASE A WITH GUANIDINIUM
1rbx	RIBONUCLEASE A CONTROL
1rca	MOL_ID: 1; MOLECULE: RIBONUCLEASE A; CHAIN: NULL; SYNONYM: RNASE A; EC: 3.1.27.5; HETEROGEN: DEOXYCYTIDYLYL-3',5'-GUANOSINE (3 ',5'-DCPDG); OTHER_DETAILS: CO-CRYSTALLIZED COMPLEX
1rcn	RIBONUCLEASE A COMPLEXED WITH DEOXYRIBONUCLEIC ACID (5'-D(APTPAPAP)-3')
1rha	RIBONUCLEASE A (LOW HUMIDITY FORM: RELATIVE HUMIDITY 79 %)
1rhb	RIBONUCLEASE A (LOW HUMIDITY FORM: RELATIVE HUMIDITY 88 %)
1rnc	RIBONUCLEASE A COMPLEX WITH CYTIDYLYL-2',5 '-GUANOSINE (2',5'-CPG)
1rnd	RIBONUCLEASE A COMPLEX WITH DEOXYCYTIDYLYL-3 ',5'-GUANOSINE (3',5'-DCPDG)
1rnm	RIBONUCLEASE A COMPLEX WITH CYTIDYLIC ACID ( 5'CMP) CRYSTALLIZED FROM 80% AMMONIUM SULPHATE
1rnn	RIBONUCLEASE A COMPLEX WITH CYTIDYLIC ACID ( 5'CMP) CRYSTALLIZED FROM 8M SODIUM FORMATE
1rno	RIBONUCLEASE A CRYSTALLIZED FROM 80% AMMONIUM SULPHATE
1rnq	RIBONUCLEASE A CRYSTALLIZED FROM 8M SODIUM FORMATE
1rnu	RIBONUCLEASE S (PH 5.5)
1rnv	RIBONUCLEASE S (PH 4.75)
1rnw	RECOMBINANT RIBONUCLEASE A CRYSTALLIZED FROM 80% AMMONIUM SULPHATE
1rnx	RIBONUCLEASE A CRYSTALLIZED FROM 3M SODIUM CHLORIDE, 30% AMMONIUM SULFATE
1rny	RIBONUCLEASE A CRYSTALLIZED FROM 3M CESIUM CHLORIDE, 30% AMMONIUM SULFATE
1rnz	RIBONUCLEASE A CRYSTALLIZED FROM 2.5M SODIUM CHLORIDE, 3.3M SODIUM FORMATE
1rob	RIBONUCLEASE A COMPLEXED WITH CYTIDYLIC ACID
1rpf	RIBONUCLEASE A COMPLEXED WITH CYTIDINE-3'- MONOPHOSPHATE (RNASE A/3'-CMP)
1rpg	RIBONUCLEASE A COMPLEXED WITH DEOXYCYTIDYL-3 ',5'-DEOXYADENOSINE (RNASE A/D(CPA)
1rph	RIBONUCLEASE A
1rsm	LYS-7-(DINITROPHENYLENE)-LYS-41 CROSS-LINKED RIBONUCLEASE A
1rta	RIBONUCLEASE A COMPLEX WITH THYMIDYLIC ACID TETRAMER
1rtb	RIBONUCLEASE A (RNASE A)
1ruv	RIBONUCLEASE A-URIDINE VANADATE COMPLEX: HIGH RESOLUTION RESOLUTION X-RAY STRUCTURE (1.3 A)
1srn	SEMISYNTHETIC RIBONUCLEASE A (RNASE 1-118( COLON)111-124)
1ssa	RIBONUCLEASE A (RESIDUES 1 - 118) COMPLEXED WITH SYNTHETIC RIBONUCLEASE A (RESIDUES 111 - 124, PHE 120 REPLACED BY LEU (F120L))
1ssb	RIBONUCLEASE A (RESIDUES 1 - 118) COMPLEXED WITH SYNTHETIC RIBONUCLEASE A (RESIDUES 111 - 124, PHE 120 REPLACED BY TYR (F120Y))
1ssc	RIBONUCLEASE A (SEMISYNTHETIC) CRYSTALLIZED FROM AQUEOUS ETHANOL [RNASE 1-118:111-124]
1un5	ARH-II, AN ANGIOGENIN/RNASE A CHIMERA
1w4p	BINDING OF NONNATURAL 3'-NUCLEOTIDES TO RIBONUCLEASE A
1w4q	BINDING OF NONNATURAL 3'-NUCLEOTIDES TO RIBONUCLEASE A
1xps	BOVINE RIBONUCLEASE A (PHOSPHATE-FREE) (93 % HUMIDITY)
1xpt	BOVINE RIBONUCLEASE A (PHOSPHATE-FREE)
2aas	RIBONUCLEASE A (NMR, 32 STRUCTURES)
2rat	RIBONUCLEASE A AT 130K
2rln	RIBONUCLEASE S MUTANT WITH MET S 13 REPLACED BY NORLEUCINE (M(S 13)NLE)
2rns	RIBONUCLEASE S (PH 4.75)
3rat	RIBONUCLEASE A AT 160K
3rn3	RIBONUCLEASE A
3rsd	STRUCTURE OF THE D121N VARIANT OF RIBONUCLEASE A
3rsk	STRUCTURE OF THE K7A/R10A/K66A VARIANT OF RIBONUCLEASE A
3rsp	STRUCTURE OF THE P93G VARIANT OF RIBONUCLEASE A
3srn	SEMISYNTHETIC RIBONUCLEASE A MUTANT WITH ASP 121 REPLACED BY ASN (D121N) (RNASE 1-118: 111-124 (D121N))
4rat	RIBONUCLEASE A AT 180K
4rsd	STRUCTURE OF THE D121A VARIANT OF RIBONUCLEASE A
4rsk	STRUCTURE OF THE K7A/R10A/K66A VARIANT OF RIBONUCLEASE A COMPLEXED WITH 3'-UMP
4srn	SEMISYNTHETIC RIBONUCLEASE A MUTANT WITH ASP 121 REPLACED BY ALA (D121A) (RNASE 1-118: 111-124 (D121A))
5rat	RIBONUCLEASE A AT 220K
5rsa	RIBONUCLEASE A (JOINT NEUTRON AND X-RAY)
6rat	RIBONUCLEASE A AT 240K
6rsa	RIBONUCLEASE A COMPLEX WITH URIDINE VANADATE (JOINT NEUTRON AND X-RAY)
7rat	RIBONUCLEASE A AT 260K
7rsa	RIBONUCLEASE A (PHOSPHATE-FREE)
8rat	RIBONUCLEASE A AT 300K
8rsa	RIBONUCLEASE A (PHOSPHATE-FREE) COMPLEX WITH NE2.12-N-ACETYL DEOXYTHYMIDINE
9rat	RIBONUCLEASE A AT 320K
9rsa	RIBONUCLEASE A (PHOSPHATE-FREE) COMPLEX WITH ND1.119-N-ACETYL DEOXYURIDINE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 1)

Sites (1, 1)

SS Bonds (8, 8)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (1, 2)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 2)

Pfam Domains (1, 2)

Gene Ontology (9, 9)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File