Chain A from PDB Type:PROTEIN Length:186
aligned with QACR_STAAU | P0A0N4 from UniProtKB/Swiss-Prot Length:188
Alignment length:186
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
QACR_STAAU 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
SCOP domains d1qvua1 A:2-72 Multidrug binding protein QacR d1qvua2 A:73-187 Multidrug binding protein QacR SCOP domains
CATH domains 1qvuA01 A:2-50 Homeodomain-like 1qvuA02 A:51-187 Tetracycline Repressor, domain 2 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------HTH_TETR_1 PDB: A:19-49 ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qvu A 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
Chain B from PDB Type:PROTEIN Length:186
aligned with QACR_STAAU | P0A0N4 from UniProtKB/Swiss-Prot Length:188
Alignment length:186
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
QACR_STAAU 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
SCOP domains d1qvub1 B:2-72 Multidrug binding protein QacR d1qvub2 B:73-187 Multidrug binding protein QacR SCOP domains
CATH domains 1qvuB01 B:2-50 Homeodomain-like 1qvuB02 B:51-187 Tetracycline Repressor, domain 2 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhh.....hhhhhhhhh..hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh....hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------HTH_TETR_1 PDB: B:19-49 ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qvu B 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
Chain D from PDB Type:PROTEIN Length:186
aligned with QACR_STAAU | P0A0N4 from UniProtKB/Swiss-Prot Length:188
Alignment length:186
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
QACR_STAAU 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
SCOP domains d1qvud1 D:2-72 Multidrug binding protein QacR d1qvud2 D:73-187 Multidrug binding protein QacR SCOP domains
CATH domains 1qvuD01 D:2-50 Homeodomain-like 1qvuD02 D:51-187 Tetracycline Repressor, domain 2 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------HTH_TETR_1 PDB: D:19-49 ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qvu D 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
Chain E from PDB Type:PROTEIN Length:186
aligned with QACR_STAAU | P0A0N4 from UniProtKB/Swiss-Prot Length:188
Alignment length:186
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
QACR_STAAU 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
SCOP domains d1qvue1 E:2-72 Multidrug binding protein QacR d1qvue2 E:73-187 Multidrug binding protein QacR SCOP domains
CATH domains 1qvuE01 E:2-50 Homeodomain-like 1qvuE02 E:51-187 Tetracycline Repressor, domain 2 CATH domains
Pfam domains (1) -----TetR_N-1qvuE01 E:7-53 ---TetR_C_5-1qvuE05 E:57-187 Pfam domains (1)
Pfam domains (2) -----TetR_N-1qvuE02 E:7-53 ---TetR_C_5-1qvuE06 E:57-187 Pfam domains (2)
Pfam domains (3) -----TetR_N-1qvuE03 E:7-53 ---TetR_C_5-1qvuE07 E:57-187 Pfam domains (3)
Pfam domains (4) -----TetR_N-1qvuE04 E:7-53 ---TetR_C_5-1qvuE08 E:57-187 Pfam domains (4)
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------HTH_TETR_1 PDB: E:19-49 ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qvu E 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
Legend: |
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |