Chain A from PDB Type:PROTEIN Length:362
aligned with PNTAA_RHORT | Q2RSB2 from UniProtKB/Swiss-Prot Length:384
Alignment length:371
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370
PNTAA_RHORT 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRD 371
SCOP domains d1ptja2 A:1-143,A:327-371 Nicotinamide nucleotide transhydrogenase dI component d1ptja1 A:144-326 Nicotinamide nucleotide transhydrogenase dI component d1ptja2 A:1-143,A:327-371 SCOP domains
CATH domains -1ptjA02 A:2-143,A:327-370 [code=3.40.50.1770, no name defined] 1ptjA01 A:144-326 NAD(P)-binding Rossmann-like Domain 1ptjA02 A:2-143,A:327-370 - CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
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SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---ALADH_PNT_1 PDB: A:4-30 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (1) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALADH_PNT_2 PDB: A:177-20------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ptj A 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVD---------AGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRD 371
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 | - | 240 250 260 270 280 290 300 310 320 330 340 350 360 370
222 232
Chain A from PDB Type:PROTEIN Length:362
aligned with PNTAA_RHORU | P0C186 from UniProtKB/Swiss-Prot Length:384
Alignment length:371
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370
PNTAA_RHORU 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRD 371
SCOP domains d1ptja2 A:1-143,A:327-371 Nicotinamide nucleotide transhydrogenase dI component d1ptja1 A:144-326 Nicotinamide nucleotide transhydrogenase dI component d1ptja2 A:1-143,A:327-371 SCOP domains
CATH domains -1ptjA02 A:2-143,A:327-370 [code=3.40.50.1770, no name defined] 1ptjA01 A:144-326 NAD(P)-binding Rossmann-like Domain 1ptjA02 A:2-143,A:327-370 - CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
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SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---ALADH_PNT_1 PDB: A:4-30 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALADH_PNT_2 PDB: A:177-20------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ptj A 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVD---------AGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRD 371
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 | - | 240 250 260 270 280 290 300 310 320 330 340 350 360 370
222 232
Chain B from PDB Type:PROTEIN Length:366
aligned with PNTAA_RHORT | Q2RSB2 from UniProtKB/Swiss-Prot Length:384
Alignment length:381
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380
PNTAA_RHORT 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVHPALTG 381
SCOP domains d1ptjb2 B:1-143,B:327-381 Nicotinamide nucleotide transhydrogenase dI component d1ptjb1 B:144-326 Nicotinamide nucleotide transhydrogenase dI component d1ptjb2 B:1-143,B:327-381 SCOP domains
CATH domains -1ptjB02 B:2-143,B:327-372 [code=3.40.50.1770, no name defined] 1ptjB01 B:144-326 NAD(P)-binding Rossmann-like Domain 1ptjB02 B:2-143,B:327-372 --------- CATH domains
Pfam domains (1) ---AlaDh_PNT_N-1ptjB01 B:4-144 --------AlaDh_PNT_C-1ptjB03 B:153-319 -------------------------------------------------------------- Pfam domains (1)
Pfam domains (2) ---AlaDh_PNT_N-1ptjB02 B:4-144 --------AlaDh_PNT_C-1ptjB04 B:153-319 -------------------------------------------------------------- Pfam domains (2)
Sec.struct. author .eeee.............hhhhhhhhhhh..eeee....hhhhh.hhhhhhh.......hhhhhhh...eeeeee...hhhhh...........eeeee.hhhhhhhhhhhhhhh..eeee.hhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eee..eee...eeeee..hhhhhhhhhhhhhh..eeeee....hhhhhhhh...ee........---------------....hhhhhhhhhhh...eeee.............hhhhhh......eeee.hhhhh.........eeeee..eeeee..hhhhhhhhhhhhhhhhhhhhhhh..ee....ee.....hhhhhhheee............ Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---ALADH_PNT_1 PDB: B:4-30 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (1) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALADH_PNT_2 PDB: B:177-20----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ptj B 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAM---------------EFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVHPALTG 381
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 | - - | 250 260 270 280 290 300 310 320 330 340 350 360 370 380
226 242
Chain B from PDB Type:PROTEIN Length:366
aligned with PNTAA_RHORU | P0C186 from UniProtKB/Swiss-Prot Length:384
Alignment length:381
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380
PNTAA_RHORU 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVHPALTG 381
SCOP domains d1ptjb2 B:1-143,B:327-381 Nicotinamide nucleotide transhydrogenase dI component d1ptjb1 B:144-326 Nicotinamide nucleotide transhydrogenase dI component d1ptjb2 B:1-143,B:327-381 SCOP domains
CATH domains -1ptjB02 B:2-143,B:327-372 [code=3.40.50.1770, no name defined] 1ptjB01 B:144-326 NAD(P)-binding Rossmann-like Domain 1ptjB02 B:2-143,B:327-372 --------- CATH domains
Pfam domains (1) ---AlaDh_PNT_N-1ptjB01 B:4-144 --------AlaDh_PNT_C-1ptjB03 B:153-319 -------------------------------------------------------------- Pfam domains (1)
Pfam domains (2) ---AlaDh_PNT_N-1ptjB02 B:4-144 --------AlaDh_PNT_C-1ptjB04 B:153-319 -------------------------------------------------------------- Pfam domains (2)
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SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---ALADH_PNT_1 PDB: B:4-30 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALADH_PNT_2 PDB: B:177-20----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ptj B 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAM---------------EFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVHPALTG 381
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 | - - | 250 260 270 280 290 300 310 320 330 340 350 360 370 380
226 242
Chain C from PDB Type:PROTEIN Length:174
aligned with PNTB_RHORT | Q2RSB4 from UniProtKB/Swiss-Prot Length:464
Alignment length:174
300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460
PNTB_RHORT 291 SVKAGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENELFFRNNTMMLFGDAKKMTEQIVQAMN 464
SCOP domains d1ptjc_ C: Transhydrogenase domain III (dIII) SCOP domains
CATH domains 1ptjC00 C:30-203 TPP-binding domain CATH domains
Pfam domains PNTB-1ptjC01 C:30-202 - Pfam domains
Sec.struct. author .....hhhhhhhhhhh..eeee..hhhhhhh.hhhhhhhhhhh......eeeeee........hhhhhhhhhh......eeehhhhh.......eee........hhhhh....................ee......................ee....hhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1ptj C 30 SVKAGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENELFFRNNTMMLFGDAKKMTEQIVQAMN 203
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199
Chain C from PDB Type:PROTEIN Length:174
aligned with PNTB_RHORU | P0C188 from UniProtKB/Swiss-Prot Length:464
Alignment length:174
300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460
PNTB_RHORU 291 SVKAGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENELFFRNNTMMLFGDAKKMTEQIVQAMN 464
SCOP domains d1ptjc_ C: Transhydrogenase domain III (dIII) SCOP domains
CATH domains 1ptjC00 C:30-203 TPP-binding domain CATH domains
Pfam domains PNTB-1ptjC01 C:30-202 - Pfam domains
Sec.struct. author .....hhhhhhhhhhh..eeee..hhhhhhh.hhhhhhhhhhh......eeeeee........hhhhhhhhhh......eeehhhhh.......eee........hhhhh....................ee......................ee....hhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1ptj C 30 SVKAGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENELFFRNNTMMLFGDAKKMTEQIVQAMN 203
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |