Chain A from PDB Type:PROTEIN Length:354
aligned with PNTAA_RHORT | Q2RSB2 from UniProtKB/Swiss-Prot Length:384
Alignment length:379
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370
PNTAA_RHORT 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVHPAL 379
SCOP domains d2fr8a2 A:1-143,A:327-379 Nicotinamide nucleotide transhydrogenase dI component d2fr8a1 A:144-326 Nicotinamide nucleotide transhydrogenase dI component d2fr8a2 A:1-143,A:327-379 SCOP domains
CATH domains -2fr8A01 A:2-143,A:327-370 [code=3.40.50.1770, no name defined] 2fr8A02 A:144-326 NAD(P)-binding Rossmann-like Domain 2fr8A01 A:2-143,A:327-370 --------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
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SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---ALADH_PNT_1 PDB: A:4-30 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALADH_PNT_2 PDB: A:177-20--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2fr8 A 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPAISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFIT-------------------------KQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVHPAL 379
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 - - | 250 260 270 280 290 300 310 320 330 340 350 360 370
220 246
Chain A from PDB Type:PROTEIN Length:354
aligned with PNTAA_RHORU | P0C186 from UniProtKB/Swiss-Prot Length:384
Alignment length:379
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370
PNTAA_RHORU 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVHPAL 379
SCOP domains d2fr8a2 A:1-143,A:327-379 Nicotinamide nucleotide transhydrogenase dI component d2fr8a1 A:144-326 Nicotinamide nucleotide transhydrogenase dI component d2fr8a2 A:1-143,A:327-379 SCOP domains
CATH domains -2fr8A01 A:2-143,A:327-370 [code=3.40.50.1770, no name defined] 2fr8A02 A:144-326 NAD(P)-binding Rossmann-like Domain 2fr8A01 A:2-143,A:327-370 --------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
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SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---ALADH_PNT_1 PDB: A:4-30 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (1) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALADH_PNT_2 PDB: A:177-20--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2fr8 A 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPAISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFIT-------------------------KQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVHPAL 379
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 - - | 250 260 270 280 290 300 310 320 330 340 350 360 370
220 246
Chain B from PDB Type:PROTEIN Length:351
aligned with PNTAA_RHORT | Q2RSB2 from UniProtKB/Swiss-Prot Length:384
Alignment length:375
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370
PNTAA_RHORT 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIV 375
SCOP domains d2fr8b2 B:1-143,B:327-375 Nicotinamide nucleotide transhydrogenase dI component d2fr8b1 B:144-326 Nicotinamide nucleotide transhydrogenase dI component d2fr8b2 B:1-143,B:327-375 SCOP domains
CATH domains -2fr8B01 B:2-143,B:327-370 [code=3.40.50.1770, no name defined] 2fr8B02 B:144-326 NAD(P)-binding Rossmann-like Domain 2fr8B01 B:2-143,B:327-370 ----- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
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SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---ALADH_PNT_1 PDB: B:4-30 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALADH_PNT_2 PDB: B:177-20----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2fr8 B 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPAISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITV------------------------KQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIV 375
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220| - - | 250 260 270 280 290 300 310 320 330 340 350 360 370
221 246
Chain B from PDB Type:PROTEIN Length:351
aligned with PNTAA_RHORU | P0C186 from UniProtKB/Swiss-Prot Length:384
Alignment length:375
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370
PNTAA_RHORU 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIV 375
SCOP domains d2fr8b2 B:1-143,B:327-375 Nicotinamide nucleotide transhydrogenase dI component d2fr8b1 B:144-326 Nicotinamide nucleotide transhydrogenase dI component d2fr8b2 B:1-143,B:327-375 SCOP domains
CATH domains -2fr8B01 B:2-143,B:327-370 [code=3.40.50.1770, no name defined] 2fr8B02 B:144-326 NAD(P)-binding Rossmann-like Domain 2fr8B01 B:2-143,B:327-370 ----- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee.............hhhhhhhhhh...eeeee...hhhhh.hhhhhhh...eee..hhhhhh...eeeeee...hhhhh..hhhhh....eeeee.....hhhhhhhhhhh..eeee.hhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eee..eee...eeeee..hhhhhhhhhhhhhhh.eeeee....hhhhhhhh...ee...------------------------.hhhhhhhhhhhh.eeee.............hhhhhhh.....eeee.hhhhh..........eeee..eeee....hhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhh.eee...... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---ALADH_PNT_1 PDB: B:4-30 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (1) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALADH_PNT_2 PDB: B:177-20----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2fr8 B 1 MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPAISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITV------------------------KQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIV 375
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220| - - | 250 260 270 280 290 300 310 320 330 340 350 360 370
221 246
Chain C from PDB Type:PROTEIN Length:174
aligned with PNTB_RHORT | Q2RSB4 from UniProtKB/Swiss-Prot Length:464
Alignment length:174
300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460
PNTB_RHORT 291 SVKAGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENELFFRNNTMMLFGDAKKMTEQIVQAMN 464
SCOP domains d2fr8c_ C: Transhydrogenase domain III (dIII) SCOP domains
CATH domains 2fr8C00 C:30-203 TPP-binding domain CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
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SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2fr8 C 30 SVKAGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENELFFRNNTMMLFGDAKKMTEQIVQAMN 203
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199
Chain C from PDB Type:PROTEIN Length:174
aligned with PNTB_RHORU | P0C188 from UniProtKB/Swiss-Prot Length:464
Alignment length:174
300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460
PNTB_RHORU 291 SVKAGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENELFFRNNTMMLFGDAKKMTEQIVQAMN 464
SCOP domains d2fr8c_ C: Transhydrogenase domain III (dIII) SCOP domains
CATH domains 2fr8C00 C:30-203 TPP-binding domain CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .....hhhhhhhhhhh..eeeeeehhhhhhh.hhhhhhhhhhhhhh...eeeeee........hhhhhhhhhh..hhh.eeehhhhh.......eeeee..hhhhhhhhhhh.................eeeeee...........hhhhhh..eeeee.hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2fr8 C 30 SVKAGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENELFFRNNTMMLFGDAKKMTEQIVQAMN 203
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |