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(-) Description

Title :  MOLYBDATE-ACTIVATED FORM OF MODE FROM ESCHERICHIA COLI
 
Authors :  A. W. Schuttelkopf, W. N. Hunter
Date :  08 Nov 02  (Deposition) - 20 Feb 03  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.75
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Transcription Regulation, Dna Binding, Molybdate, Mop, Winged Helix-Turn-Helix, Transcriptional Regulator, Activator (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. W. Schuttelkopf, D. H. Boxer, W. N. Hunter
Crystal Structure Of Activated Mode Reveals Conformational Changes Involving Both Oxyanion And Dna-Binding Domains
J. Mol. Biol. V. 326 761 2003
PubMed-ID: 12581638  |  Reference-DOI: 10.1016/S0022-2836(02)01358-X

(-) Compounds

Molecule 1 - TRANSCRIPTIONAL REGULATOR MODE
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PLAA6
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET-15B
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: MODE, MODR

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 7)

Asymmetric Unit (3, 7)
No.NameCountTypeFull Name
1CA1Ligand/IonCALCIUM ION
2CL1Ligand/IonCHLORIDE ION
3MOO5Ligand/IonMOLYBDATE ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3MOO2Ligand/IonMOLYBDATE ION
Biological Unit 2 (1, 3)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CL-1Ligand/IonCHLORIDE ION
3MOO3Ligand/IonMOLYBDATE ION

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA B:214BINDING SITE FOR RESIDUE CL B1264
2AC2SOFTWAREGLU C:215 , ASP D:141 , GLN D:144 , MOO D:1264 , HOH D:2004BINDING SITE FOR RESIDUE CA D1265
3AC3SOFTWARESER A:126 , ALA A:127 , ARG A:128 , LYS A:183 , ALA A:184 , PRO A:185 , THR B:163 , SER B:166BINDING SITE FOR RESIDUE MOO A1263
4AC4SOFTWARETHR A:163 , SER A:166 , SER B:126 , ALA B:127 , ARG B:128 , LYS B:183 , ALA B:184 , PRO B:185BINDING SITE FOR RESIDUE MOO B1263
5AC5SOFTWARESER C:126 , ALA C:127 , ARG C:128 , LYS C:183 , ALA C:184 , PRO C:185 , ILE D:162 , THR D:163 , SER D:166BINDING SITE FOR RESIDUE MOO C1262
6AC6SOFTWAREILE C:162 , THR C:163 , SER C:166 , SER D:126 , ALA D:127 , ARG D:128 , LYS D:183 , ALA D:184 , PRO D:185BINDING SITE FOR RESIDUE MOO D1263
7AC7SOFTWAREHIS B:140 , GLY C:213 , ALA C:214 , GLN C:216 , ASP D:141 , ASP D:142 , VAL D:143 , GLN D:144 , CA D:1265BINDING SITE FOR RESIDUE MOO D1264

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1O7L)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1O7L)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1O7L)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1O7L)

(-) Exons   (0, 0)

(no "Exon" information available for 1O7L)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:255
 aligned with MODE_ECO57 | P0A9G9 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:262
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
           MODE_ECO57     1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
               SCOP domains d1o7la1 A:1-126 N-terminal domain of molybdate-dependent transcrip       tional regulator ModE                                d1o7la2 A:127-199                                                        d1o7la3 A:200-262                                               SCOP domains
               CATH domains 1o7lA01 A:1-110 'winged helix' repressor DNA binding domain                                                   1o7lA02 A:111-181,A:253-261  [code=2.40.50.100, no name defined]       1o7lA03 A:182-252  [code=2.40.50.100, no name defined]                 1o7lA02  - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeehhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.......-------.....hhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhh.ee...eeeeeeeeee.....eeeeeeee.....eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhhhh.eeeeeeeeeee....eeeeeee......eeeeee.hhh.......eeeeeehhhhheeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l A   1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVER-------GGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
                                    10        20        30        40        50        60     |   -   |    80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
                                                                                            66      74                                                                                                                                                                                            


Chain A from PDB  Type:PROTEIN  Length:255
 aligned with MODE_ECOLI | P0A9G8 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:262
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
           MODE_ECOLI     1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
               SCOP domains d1o7la1 A:1-126 N-terminal domain of molybdate-dependent transcrip       tional regulator ModE                                d1o7la2 A:127-199                                                        d1o7la3 A:200-262                                               SCOP domains
               CATH domains 1o7lA01 A:1-110 'winged helix' repressor DNA binding domain                                                   1o7lA02 A:111-181,A:253-261  [code=2.40.50.100, no name defined]       1o7lA03 A:182-252  [code=2.40.50.100, no name defined]                 1o7lA02  - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeehhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.......-------.....hhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhh.ee...eeeeeeeeee.....eeeeeeee.....eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhhhh.eeeeeeeeeee....eeeeeee......eeeeee.hhh.......eeeeeehhhhheeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l A   1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVER-------GGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
                                    10        20        30        40        50        60     |   -   |    80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
                                                                                            66      74                                                                                                                                                                                            


Chain A from PDB  Type:PROTEIN  Length:255
 aligned with MODE_SHIFL | P0A9H0 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:262
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
           MODE_SHIFL     1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
               SCOP domains d1o7la1 A:1-126 N-terminal domain of molybdate-dependent transcrip       tional regulator ModE                                d1o7la2 A:127-199                                                        d1o7la3 A:200-262                                               SCOP domains
               CATH domains 1o7lA01 A:1-110 'winged helix' repressor DNA binding domain                                                   1o7lA02 A:111-181,A:253-261  [code=2.40.50.100, no name defined]       1o7lA03 A:182-252  [code=2.40.50.100, no name defined]                 1o7lA02  - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeehhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.......-------.....hhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhh.ee...eeeeeeeeee.....eeeeeeee.....eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhhhh.eeeeeeeeeee....eeeeeee......eeeeee.hhh.......eeeeeehhhhheeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l A   1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVER-------GGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
                                    10        20        30        40        50        60     |   -   |    80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
                                                                                            66      74                                                                                                                                                                                            


Chain B from PDB  Type:PROTEIN  Length:256
 aligned with MODE_ECO57 | P0A9G9 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:262
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
           MODE_ECO57     1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
               SCOP domains d1o7lb1 B:1-126 N-terminal domain of molybdate-dependent transcriptio      nal regulator ModE                                 d1o7lb2 B:127-199                                                        d1o7lb3 B:200-262                                               SCOP domains
               CATH domains 1o7lB01 B:1-110 'winged helix' repressor DNA binding domain                                                   1o7lB02 B:111-181,B:253-261  [code=2.40.50.100, no name defined]       1o7lB03 B:182-252  [code=2.40.50.100, no name defined]                 1o7lB02  - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee......hhhhhhhhhhhhhhh..hhhhhh........hhhhhhhhhhh..........------...hhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhh.ee...eeeeeeeeee.....eeeeeee......eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhh...eeeeeeeeeeee...eeeeeee.....eeeeeee...........eeeeee.....eeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l B   1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATG------AVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
                                    10        20        30        40        50        60        |-     |  80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
                                                                                               69     76                                                                                                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:256
 aligned with MODE_ECOLI | P0A9G8 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:262
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
           MODE_ECOLI     1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
               SCOP domains d1o7lb1 B:1-126 N-terminal domain of molybdate-dependent transcriptio      nal regulator ModE                                 d1o7lb2 B:127-199                                                        d1o7lb3 B:200-262                                               SCOP domains
               CATH domains 1o7lB01 B:1-110 'winged helix' repressor DNA binding domain                                                   1o7lB02 B:111-181,B:253-261  [code=2.40.50.100, no name defined]       1o7lB03 B:182-252  [code=2.40.50.100, no name defined]                 1o7lB02  - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee......hhhhhhhhhhhhhhh..hhhhhh........hhhhhhhhhhh..........------...hhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhh.ee...eeeeeeeeee.....eeeeeee......eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhh...eeeeeeeeeeee...eeeeeee.....eeeeeee...........eeeeee.....eeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l B   1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATG------AVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
                                    10        20        30        40        50        60        |-     |  80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
                                                                                               69     76                                                                                                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:256
 aligned with MODE_SHIFL | P0A9H0 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:262
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
           MODE_SHIFL     1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
               SCOP domains d1o7lb1 B:1-126 N-terminal domain of molybdate-dependent transcriptio      nal regulator ModE                                 d1o7lb2 B:127-199                                                        d1o7lb3 B:200-262                                               SCOP domains
               CATH domains 1o7lB01 B:1-110 'winged helix' repressor DNA binding domain                                                   1o7lB02 B:111-181,B:253-261  [code=2.40.50.100, no name defined]       1o7lB03 B:182-252  [code=2.40.50.100, no name defined]                 1o7lB02  - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee......hhhhhhhhhhhhhhh..hhhhhh........hhhhhhhhhhh..........------...hhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhh.ee...eeeeeeeeee.....eeeeeee......eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhh...eeeeeeeeeeee...eeeeeee.....eeeeeee...........eeeeee.....eeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l B   1 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATG------AVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
                                    10        20        30        40        50        60        |-     |  80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
                                                                                               69     76                                                                                                                                                                                          


Chain C from PDB  Type:PROTEIN  Length:255
 aligned with MODE_ECO57 | P0A9G9 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:260
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261
           MODE_ECO57     2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATL 261
               SCOP domains d1o7lc1 C:2-126 N-terminal domain of molybdate-dependent transcri     ptional regulator ModE                                 d1o7lc2 C:127-199                                                        d1o7lc3 C:200-261                                              SCOP domains
               CATH domains 1o7lC01 C:2-110 'winged helix' repressor DNA binding domain                                                  1o7lC02 C:111-181,C:253-260  [code=2.40.50.100, no name defined]       1o7lC03 C:182-252  [code=2.40.50.100, no name defined]                 1o7lC02 - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.eee..eeeehhhhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhh......-----.......hhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhh.ee...eeeeeeeeee.....eeeeeeee.....eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhh...eeeeeeeeeee....eeeeeee.....eeeeeee.hhhh......eeeeeehhhhheeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l C   2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVER-----GGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATL 261
                                    11        21        31        41        51        61    |    -|       81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261
                                                                                           66    72                                                                                                                                                                                             


Chain C from PDB  Type:PROTEIN  Length:255
 aligned with MODE_ECOLI | P0A9G8 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:260
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261
           MODE_ECOLI     2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATL 261
               SCOP domains d1o7lc1 C:2-126 N-terminal domain of molybdate-dependent transcri     ptional regulator ModE                                 d1o7lc2 C:127-199                                                        d1o7lc3 C:200-261                                              SCOP domains
               CATH domains 1o7lC01 C:2-110 'winged helix' repressor DNA binding domain                                                  1o7lC02 C:111-181,C:253-260  [code=2.40.50.100, no name defined]       1o7lC03 C:182-252  [code=2.40.50.100, no name defined]                 1o7lC02 - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.eee..eeeehhhhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhh......-----.......hhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhh.ee...eeeeeeeeee.....eeeeeeee.....eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhh...eeeeeeeeeee....eeeeeee.....eeeeeee.hhhh......eeeeeehhhhheeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l C   2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVER-----GGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATL 261
                                    11        21        31        41        51        61    |    -|       81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261
                                                                                           66    72                                                                                                                                                                                             


Chain C from PDB  Type:PROTEIN  Length:255
 aligned with MODE_SHIFL | P0A9H0 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:260
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261
           MODE_SHIFL     2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATL 261
               SCOP domains d1o7lc1 C:2-126 N-terminal domain of molybdate-dependent transcri     ptional regulator ModE                                 d1o7lc2 C:127-199                                                        d1o7lc3 C:200-261                                              SCOP domains
               CATH domains 1o7lC01 C:2-110 'winged helix' repressor DNA binding domain                                                  1o7lC02 C:111-181,C:253-260  [code=2.40.50.100, no name defined]       1o7lC03 C:182-252  [code=2.40.50.100, no name defined]                 1o7lC02 - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.eee..eeeehhhhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhh......-----.......hhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhh.ee...eeeeeeeeee.....eeeeeeee.....eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhh...eeeeeeeeeee....eeeeeee.....eeeeeee.hhhh......eeeeeehhhhheeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l C   2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVER-----GGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATL 261
                                    11        21        31        41        51        61    |    -|       81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261
                                                                                           66    72                                                                                                                                                                                             


Chain D from PDB  Type:PROTEIN  Length:254
 aligned with MODE_ECO57 | P0A9G9 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:261
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261 
           MODE_ECO57     2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
               SCOP domains d1o7ld1 D:2-126 N-terminal domain of molybdate-dependent transcrip       tional regulator ModE                               d1o7ld2 D:127-199                                                        d1o7ld3 D:200-262                                               SCOP domains
               CATH domains 1o7lD01 D:2-110 'winged helix' repressor DNA binding domain                                                  1o7lD02 D:111-181,D:253-261  [code=2.40.50.100, no name defined]       1o7lD03 D:182-252  [code=2.40.50.100, no name defined]                 1o7lD02  - CATH domains
           Pfam domains (1) -----------------HTH_1-1o7lD01 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD05 D:197-258                                        ---- Pfam domains (1)
           Pfam domains (2) -----------------HTH_1-1o7lD02 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD06 D:197-258                                        ---- Pfam domains (2)
           Pfam domains (3) -----------------HTH_1-1o7lD03 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD07 D:197-258                                        ---- Pfam domains (3)
           Pfam domains (4) -----------------HTH_1-1o7lD04 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD08 D:197-258                                        ---- Pfam domains (4)
           Pfam domains (5) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD09 D:197-258                                        ---- Pfam domains (5)
           Pfam domains (6) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD10 D:197-258                                        ---- Pfam domains (6)
           Pfam domains (7) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD11 D:197-258                                        ---- Pfam domains (7)
           Pfam domains (8) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD12 D:197-258                                        ---- Pfam domains (8)
         Sec.struct. author .....eeeee......hhhhhhhhhhhhhhh..hhhhhh.....hhhhhhhhhhhhhh....ee..-------..eehhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhh...ee...eeeeeeeeee.....eeeeeee......eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhh...eeeeeeeeeeee...eeeeeee.....eeeeeee...........eeeeee.....eeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l D   2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERA-------GAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
                                    11        21        31        41        51        61     |   -   |    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261 
                                                                                            67      75                                                                                                                                                                                           


Chain D from PDB  Type:PROTEIN  Length:254
 aligned with MODE_ECOLI | P0A9G8 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:261
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261 
           MODE_ECOLI     2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
               SCOP domains d1o7ld1 D:2-126 N-terminal domain of molybdate-dependent transcrip       tional regulator ModE                               d1o7ld2 D:127-199                                                        d1o7ld3 D:200-262                                               SCOP domains
               CATH domains 1o7lD01 D:2-110 'winged helix' repressor DNA binding domain                                                  1o7lD02 D:111-181,D:253-261  [code=2.40.50.100, no name defined]       1o7lD03 D:182-252  [code=2.40.50.100, no name defined]                 1o7lD02  - CATH domains
           Pfam domains (1) -----------------HTH_1-1o7lD01 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD05 D:197-258                                        ---- Pfam domains (1)
           Pfam domains (2) -----------------HTH_1-1o7lD02 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD06 D:197-258                                        ---- Pfam domains (2)
           Pfam domains (3) -----------------HTH_1-1o7lD03 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD07 D:197-258                                        ---- Pfam domains (3)
           Pfam domains (4) -----------------HTH_1-1o7lD04 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD08 D:197-258                                        ---- Pfam domains (4)
           Pfam domains (5) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD09 D:197-258                                        ---- Pfam domains (5)
           Pfam domains (6) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD10 D:197-258                                        ---- Pfam domains (6)
           Pfam domains (7) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD11 D:197-258                                        ---- Pfam domains (7)
           Pfam domains (8) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD12 D:197-258                                        ---- Pfam domains (8)
         Sec.struct. author .....eeeee......hhhhhhhhhhhhhhh..hhhhhh.....hhhhhhhhhhhhhh....ee..-------..eehhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhh...ee...eeeeeeeeee.....eeeeeee......eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhh...eeeeeeeeeeee...eeeeeee.....eeeeeee...........eeeeee.....eeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l D   2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERA-------GAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
                                    11        21        31        41        51        61     |   -   |    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261 
                                                                                            67      75                                                                                                                                                                                           


Chain D from PDB  Type:PROTEIN  Length:254
 aligned with MODE_SHIFL | P0A9H0 from UniProtKB/Swiss-Prot  Length:262

    Alignment length:261
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261 
           MODE_SHIFL     2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
               SCOP domains d1o7ld1 D:2-126 N-terminal domain of molybdate-dependent transcrip       tional regulator ModE                               d1o7ld2 D:127-199                                                        d1o7ld3 D:200-262                                               SCOP domains
               CATH domains 1o7lD01 D:2-110 'winged helix' repressor DNA binding domain                                                  1o7lD02 D:111-181,D:253-261  [code=2.40.50.100, no name defined]       1o7lD03 D:182-252  [code=2.40.50.100, no name defined]                 1o7lD02  - CATH domains
           Pfam domains (1) -----------------HTH_1-1o7lD01 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD05 D:197-258                                        ---- Pfam domains (1)
           Pfam domains (2) -----------------HTH_1-1o7lD02 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD06 D:197-258                                        ---- Pfam domains (2)
           Pfam domains (3) -----------------HTH_1-1o7lD03 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD07 D:197-258                                        ---- Pfam domains (3)
           Pfam domains (4) -----------------HTH_1-1o7lD04 D:19-83                                            -----------------------------------------------------------------------------------------------------------------TOBE-1o7lD08 D:197-258                                        ---- Pfam domains (4)
           Pfam domains (5) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD09 D:197-258                                        ---- Pfam domains (5)
           Pfam domains (6) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD10 D:197-258                                        ---- Pfam domains (6)
           Pfam domains (7) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD11 D:197-258                                        ---- Pfam domains (7)
           Pfam domains (8) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TOBE-1o7lD12 D:197-258                                        ---- Pfam domains (8)
         Sec.struct. author .....eeeee......hhhhhhhhhhhhhhh..hhhhhh.....hhhhhhhhhhhhhh....ee..-------..eehhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhh...ee...eeeeeeeeee.....eeeeeee......eeeeeeehhhhhhh......eeeeeehhhhheee.hhhhhh...eeeeeeeeeeee...eeeeeee.....eeeeeee...........eeeeee.....eeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o7l D   2 QAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERA-------GAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC 262
                                    11        21        31        41        51        61     |   -   |    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261 
                                                                                            67      75
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (2, 12)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)
(-)
Class: Mainly Beta (13760)
(-)
Architecture: Beta Barrel (4804)
(-)
Topology: OB fold (Dihydrolipoamide Acetyltransferase, E2P) (1040)
(-)
Homologous Superfamily: [code=2.40.50.100, no name defined] (113)
(-)
Escherichia coli. Organism_taxid: 562. (5)
2a1o7lC02C:111-181,C:253-260
2b1o7lA03A:182-252
2c1o7lB03B:182-252
2d1o7lC03C:182-252
2e1o7lD03D:182-252
2f1o7lA02A:111-181,A:253-261
2g1o7lB02B:111-181,B:253-261
2h1o7lD02D:111-181,D:253-261

(-) Pfam Domains  (2, 12)

Asymmetric Unit
(-)
Clan: HTH (544)
(-)
Clan: OB (224)
(-)
Family: TOBE (1)
(-)
Escherichia coli (strain K12) (1)
2aTOBE-1o7lD05D:197-258
2bTOBE-1o7lD06D:197-258
2cTOBE-1o7lD07D:197-258
2dTOBE-1o7lD08D:197-258
2eTOBE-1o7lD09D:197-258
2fTOBE-1o7lD10D:197-258
2gTOBE-1o7lD11D:197-258
2hTOBE-1o7lD12D:197-258

(-) Gene Ontology  (9, 25)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (MODE_ECO57 | P0A9G9)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
    GO:0030151    molybdenum ion binding    Interacting selectively and non-covalently with molybdenum (Mo) ions.
    GO:0003700    transcription factor activity, sequence-specific DNA binding    Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
biological process
    GO:0015689    molybdate ion transport    The directed movement of molybdate (MoO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Molybdate is the bivalent anion derived from molybdic acid.
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B,C,D   (MODE_SHIFL | P0A9H0)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
    GO:0030151    molybdenum ion binding    Interacting selectively and non-covalently with molybdenum (Mo) ions.
    GO:0003700    transcription factor activity, sequence-specific DNA binding    Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
biological process
    GO:0015689    molybdate ion transport    The directed movement of molybdate (MoO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Molybdate is the bivalent anion derived from molybdic acid.
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B,C,D   (MODE_ECOLI | P0A9G8)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
    GO:0030151    molybdenum ion binding    Interacting selectively and non-covalently with molybdenum (Mo) ions.
    GO:0003700    transcription factor activity, sequence-specific DNA binding    Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
biological process
    GO:0015689    molybdate ion transport    The directed movement of molybdate (MoO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Molybdate is the bivalent anion derived from molybdic acid.
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MODE_ECO57 | P0A9G9: 1h9r 1h9s
        MODE_ECOLI | P0A9G8: 1b9m 1b9n 1h9r 1h9s
        MODE_SHIFL | P0A9H0: 1h9r 1h9s

(-) Related Entries Specified in the PDB File

1b9m REGULATOR FROM ESCHERICHIA COLI
1b9n REGULATOR FROM ESCHERICHIA COLI
1h9r TUNGSTATE BOUND COMPLEX DIMOP DOMAIN OF MODE FROM E.COLI
1h9s MOLYBDATE BOUND COMPLEX OF DIMOP DOMAIN OF MODE FROM E.COLI