1M1P - JenaLib

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Biological Unit 13 (Jmol Viewer)

Title :   P21 CRYSTAL STRUCTURE OF THE TETRAHEME CYTOCHROME C3 FROM SHEWANELLA ONEIDENSIS MR1

Authors :   D. Leys, T. E. Meyer, A. I. Tsapin, K. H. Nealson, M. A. Cusanovich, J. J. Van Beeumen

Date :   20 Jun 02 (Deposition) - 14 Aug 02 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.55

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)
Biol. Unit 5: E  (1x)
Biol. Unit 6: F  (1x)
Biol. Unit 7: A (1x),C (1x),D (1x),E (1x),F (1x)
Biol. Unit 8: A (1x),C (1x),D (1x),E (1x),F (1x)
Biol. Unit 9: A (1x),D (1x),E (1x),F (1x)
Biol. Unit 10: D,E,F  (1x)
Biol. Unit 11: E,F  (1x)
Biol. Unit 12: D,E  (1x)
Biol. Unit 13: C (1x),D (1x)

Keywords :   Tetraheme Cytochrome C, Electron Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. Leys, T. E. Meyer, A. I. Tsapin, K. H. Nealson, M. A. Cusanovich, J. J. Van Beeumen
Crystal Structures At Atomic Resolution Reveal The Novel Concept Of 'Electron-Harvesting' As A Role For The Small Tetraheme Cytochrome C
J. Biol. Chem. V. 277 35703 2002
PubMed-ID: 12080059 | Reference-DOI: 10.1074/JBC.M203866200
(for further references see the PDB file header)

Molecule 1 - SMALL TETRAHEME CYTOCHROME C
	Chains	:	A, B, C, D, E, F
	Organism Scientific	:	SHEWANELLA ONEIDENSIS
	Organism Taxid	:	70863
	Strain	:	STRAIN MR1

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D
Biological Unit 5 (1x)	:					E
Biological Unit 6 (1x)	:						F
Biological Unit 7 (1x)	:	A (1x)		C (1x)	D (1x)	E (1x)	F (1x)
Biological Unit 8 (1x)	:	A (1x)		C (1x)	D (1x)	E (1x)	F (1x)
Biological Unit 9 (1x)	:	A (1x)			D (1x)	E (1x)	F (1x)
Biological Unit 10 (1x)	:				D	E	F
Biological Unit 11 (1x)	:					E	F
Biological Unit 12 (1x)	:				D	E
Biological Unit 13 (1x)	:			C (1x)	D (1x)

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 28)

No.	Name	Count	Type	Full Name
1	HEM	24	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	4	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 5)

No.	Name	Count	Type	Full Name
1	HEM	4	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 2 (2, 5)

No.	Name	Count	Type	Full Name
1	HEM	4	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 3 (2, 5)

No.	Name	Count	Type	Full Name
1	HEM	4	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 4 (1, 4)

No.	Name	Count	Type	Full Name
1	HEM	4	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 5 (1, 4)

No.	Name	Count	Type	Full Name
1	HEM	4	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 6 (2, 5)

No.	Name	Count	Type	Full Name
1	HEM	4	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 7 (0, 0)

No.	Name	Count	Type	Full Name
1	HEM	-1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 8 (0, 0)

No.	Name	Count	Type	Full Name
1	HEM	-1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 9 (0, 0)

No.	Name	Count	Type	Full Name
1	HEM	-1	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 10 (2, 13)

No.	Name	Count	Type	Full Name
1	HEM	12	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 11 (2, 9)

No.	Name	Count	Type	Full Name
1	HEM	8	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 12 (1, 8)

No.	Name	Count	Type	Full Name
1	HEM	8	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 13 (2, 5)

No.	Name	Count	Type	Full Name
1	HEM	4	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	SO4	1	Ligand/Ion	SULFATE ION

Asymmetric Unit (28, 28)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	HIS C:79 , ASP C:80 , ASP C:81 , ARG C:83 , HOH C:1288 , HOH C:1295 , HOH C:1300	BINDING SITE FOR RESIDUE SO4 C 1162
02	AC2	SOFTWARE	HIS F:79 , ASP F:80 , ASP F:81 , ARG F:83 , HOH F:1217 , HOH F:1247	BINDING SITE FOR RESIDUE SO4 F 1163
03	AC3	SOFTWARE	HIS A:79 , ASP A:80 , ASP A:81 , ARG A:83 , HOH A:1239	BINDING SITE FOR RESIDUE SO4 A 1164
04	AC4	SOFTWARE	HIS B:79 , ASP B:80 , ASP B:81 , ARG B:83 , HOH B:1262 , HOH B:1323 , HOH B:1361	BINDING SITE FOR RESIDUE SO4 B 1165
05	AC5	SOFTWARE	SER A:6 , HIS A:9 , CYS A:15 , SER A:17 , CYS A:18 , HIS A:19 , PRO A:24 , ALA A:59 , ALA A:63 , VAL A:64 , HIS A:65 , HOH A:1186 , HOH A:1218 , HOH A:1314 , HOH A:1320 , HOH A:1342	BINDING SITE FOR RESIDUE HEM A 801
06	AC6	SOFTWARE	PRO A:51 , HIS A:52 , ASN A:55 , CYS A:75 , CYS A:78 , HIS A:79 , ARG A:83 , THR A:84 , VAL A:88 , HEM A:803 , HOH A:1195 , HOH A:1239 , HOH A:1331	BINDING SITE FOR RESIDUE HEM A 804
07	AC7	SOFTWARE	HIS A:9 , SER A:17 , GLN A:34 , CYS A:35 , CYS A:38 , HIS A:39 , HIS A:62 , GLY A:70 , HEM A:803 , HOH A:1217 , HOH A:1219 , HOH A:1255 , HOH A:1256 , HOH A:1260 , HOH A:1283 , HOH A:1297 , PRO F:24 , SER F:25 , ALA F:26 , HEM F:801	BINDING SITE FOR RESIDUE HEM A 802
08	AC8	SOFTWARE	HIS A:39 , ASP A:46 , VAL A:48 , HIS A:49 , HIS A:52 , CYS A:58 , CYS A:61 , HIS A:62 , PRO A:73 , LEU A:89 , HEM A:802 , HEM A:804 , HOH A:1217 , HOH A:1255 , HOH A:1290	BINDING SITE FOR RESIDUE HEM A 803
09	AC9	SOFTWARE	SER B:6 , HIS B:9 , CYS B:15 , SER B:17 , CYS B:18 , HIS B:19 , PRO B:24 , VAL B:64 , HIS B:65 , HEM B:802 , HOH B:1226 , HOH B:1253 , HOH B:1260 , HOH B:1289 , HOH B:1295 , HOH B:1347 , HOH B:1359	BINDING SITE FOR RESIDUE HEM B 801
10	BC1	SOFTWARE	PRO B:51 , HIS B:52 , ASN B:55 , CYS B:75 , SER B:77 , CYS B:78 , HIS B:79 , ARG B:83 , VAL B:88 , HEM B:803 , HOH B:1257 , HOH B:1325 , HOH B:1361	BINDING SITE FOR RESIDUE HEM B 804
11	BC2	SOFTWARE	LEU B:5 , HIS B:9 , SER B:17 , GLN B:34 , CYS B:35 , CYS B:38 , HIS B:39 , HIS B:62 , VAL B:69 , GLY B:70 , HEM B:801 , HEM B:803 , HOH B:1269 , HOH B:1301 , HOH B:1340 , HOH B:1354	BINDING SITE FOR RESIDUE HEM B 802
12	BC3	SOFTWARE	HIS B:39 , ASP B:46 , HIS B:49 , HIS B:52 , CYS B:58 , CYS B:61 , HIS B:62 , PRO B:73 , SER B:85 , LEU B:89 , HEM B:802 , HEM B:804 , HOH B:1299 , HOH B:1355	BINDING SITE FOR RESIDUE HEM B 803
13	BC4	SOFTWARE	SER C:6 , HIS C:9 , CYS C:15 , CYS C:18 , HIS C:19 , PRO C:24 , VAL C:64 , HIS C:65 , HOH C:1212 , HOH C:1219 , HOH C:1253 , HOH C:1312	BINDING SITE FOR RESIDUE HEM C 801
14	BC5	SOFTWARE	PRO C:51 , HIS C:52 , ASN C:55 , LEU C:56 , CYS C:75 , SER C:77 , CYS C:78 , HIS C:79 , ARG C:83 , VAL C:88 , HEM C:803 , HOH C:1300	BINDING SITE FOR RESIDUE HEM C 804
15	BC6	SOFTWARE	LEU C:5 , PHE C:8 , HIS C:9 , SER C:17 , GLN C:34 , CYS C:35 , CYS C:38 , HIS C:39 , CYS C:58 , HIS C:62 , VAL C:69 , GLY C:70 , HEM C:803 , HOH C:1177 , HOH C:1217 , HOH C:1223 , HOH C:1231 , HOH C:1241 , HOH C:1245 , HOH C:1248 , HOH C:1273 , HOH C:1310	BINDING SITE FOR RESIDUE HEM C 802
16	BC7	SOFTWARE	HIS C:39 , HIS C:49 , HIS C:52 , CYS C:58 , CYS C:61 , HIS C:62 , LYS C:72 , PRO C:73 , SER C:85 , HEM C:802 , HEM C:804 , HOH C:1266 , HOH C:1272 , HOH C:1285 , HOH C:1324	BINDING SITE FOR RESIDUE HEM C 803
17	BC8	SOFTWARE	SER D:6 , HIS D:9 , CYS D:15 , SER D:17 , CYS D:18 , HIS D:19 , HIS D:62 , ALA D:63 , VAL D:64 , HIS D:65 , HEM D:802 , HOH D:821 , HOH D:958 , HOH D:962 , HOH D:982	BINDING SITE FOR RESIDUE HEM D 801
18	BC9	SOFTWARE	PRO D:51 , HIS D:52 , LEU D:56 , CYS D:75 , SER D:77 , CYS D:78 , HIS D:79 , ARG D:83 , VAL D:88 , HEM D:803 , HOH D:817 , HOH D:826 , HOH D:848 , HOH D:855 , HOH D:968 , THR E:84 , SER E:85 , ALA E:86 , HOH E:811 , HOH E:817 , HOH E:853	BINDING SITE FOR RESIDUE HEM D 804
19	CC1	SOFTWARE	LEU D:5 , PHE D:8 , HIS D:9 , SER D:17 , GLN D:34 , CYS D:35 , CYS D:38 , HIS D:39 , CYS D:58 , HIS D:62 , VAL D:69 , GLY D:70 , HEM D:801 , HEM D:803 , HOH D:822 , HOH D:831 , HOH D:832 , HOH D:839 , HOH D:842	BINDING SITE FOR RESIDUE HEM D 802
20	CC2	SOFTWARE	HIS D:39 , HIS D:49 , HIS D:52 , CYS D:58 , CYS D:61 , HIS D:62 , LYS D:72 , PRO D:73 , SER D:85 , HEM D:802 , HEM D:804 , HOH D:850 , HOH D:851 , HOH D:882 , HOH D:897 , HOH D:942	BINDING SITE FOR RESIDUE HEM D 803
21	CC3	SOFTWARE	SER E:6 , HIS E:9 , CYS E:15 , CYS E:18 , HIS E:19 , ALA E:63 , VAL E:64 , HIS E:65 , HOH E:834 , HOH E:886 , HOH E:935 , HOH E:947 , HOH E:964 , HOH E:978 , GLU F:11	BINDING SITE FOR RESIDUE HEM E 801
22	CC4	SOFTWARE	PRO E:51 , HIS E:52 , ASN E:55 , ASP E:60 , CYS E:75 , CYS E:78 , HIS E:79 , ARG E:83 , HEM E:803 , HOH E:807 , HOH E:810 , HOH E:824 , HOH E:859 , HOH E:861 , HOH E:932	BINDING SITE FOR RESIDUE HEM E 804
23	CC5	SOFTWARE	LEU E:5 , PHE E:8 , HIS E:9 , SER E:17 , GLN E:34 , CYS E:35 , CYS E:38 , HIS E:39 , HIS E:62 , GLY E:70 , HEM E:803 , HOH E:889 , HOH E:924 , HOH E:927 , SER F:37 , CYS F:38 , HIS F:39 , HEM F:802 , HEM F:803 , HOH F:1174 , HOH F:1272 , HOH F:1293	BINDING SITE FOR RESIDUE HEM E 802
24	CC6	SOFTWARE	HIS E:39 , LEU E:42 , HIS E:49 , HIS E:52 , CYS E:58 , CYS E:61 , HIS E:62 , LYS E:72 , PRO E:73 , SER E:85 , HEM E:802 , HEM E:804 , HOH E:851 , HOH E:885 , HOH E:887 , HOH E:968 , HOH F:1299	BINDING SITE FOR RESIDUE HEM E 803
25	CC7	SOFTWARE	SER A:12 , HEM A:802 , GLU E:16 , SER F:6 , HIS F:9 , CYS F:15 , SER F:17 , CYS F:18 , HIS F:19 , PRO F:24 , VAL F:64 , HIS F:65 , HOH F:1176 , HOH F:1188 , HOH F:1196 , HOH F:1202 , HOH F:1229 , HOH F:1231 , HOH F:1237 , HOH F:1313	BINDING SITE FOR RESIDUE HEM F 801
26	CC8	SOFTWARE	ALA B:86 , LYS B:90 , LYS B:91 , PRO F:51 , HIS F:52 , LEU F:56 , PRO F:73 , THR F:74 , CYS F:75 , CYS F:78 , HIS F:79 , ARG F:83 , VAL F:88 , HEM F:803 , HOH F:1187 , HOH F:1212 , HOH F:1247 , HOH F:1274	BINDING SITE FOR RESIDUE HEM F 804
27	CC9	SOFTWARE	CYS E:38 , HIS E:39 , HEM E:802 , PHE F:8 , HIS F:9 , SER F:17 , GLN F:34 , CYS F:35 , CYS F:38 , HIS F:39 , HIS F:62 , GLY F:70 , HEM F:803 , HOH F:1209 , HOH F:1220 , HOH F:1257 , HOH F:1293 , HOH F:1294 , HOH F:1299 , HOH F:1314	BINDING SITE FOR RESIDUE HEM F 802
28	DC1	SOFTWARE	HEM E:802 , HIS F:39 , MET F:45 , ASP F:46 , HIS F:49 , HIS F:52 , CYS F:58 , CYS F:61 , HIS F:62 , LYS F:72 , PRO F:73 , SER F:85 , LEU F:89 , HEM F:802 , HEM F:804 , HOH F:1272 , HOH F:1295 , HOH F:1310	BINDING SITE FOR RESIDUE HEM F 803

(no "SS Bond" information available for 1M1P)

(no "Cis Peptide Bond" information available for 1M1P)

(no "SAP(SNP)/Variant" information available for 1M1P)

(no "PROSITE Motif" information available for 1M1P)

(no "Exon" information available for 1M1P)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:88
 aligned with Q8EDL6_SHEON | Q8EDL6 from UniProtKB/TrEMBL  Length:116

    Alignment length:88
                                    36        46        56        66        76        86        96       106        
         Q8EDL6_SHEON    27 DQKLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVL 114
               SCOP domains d1m1pa_ A: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain        SCOP domains
               CATH domains 1m1pA00 A:2-89 Flavocytochrome C3; Chain A                                               CATH domains
               Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...hhhhh...hhhhh......................hhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------- Transcript
                 1m1p A   2 DQKLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVL  89
                                    11        21        31        41        51        61        71        81

Chain B from PDB  Type:PROTEIN  Length:89
 aligned with Q8EDL6_SHEON | Q8EDL6 from UniProtKB/TrEMBL  Length:116

    Alignment length:90
                                    36        46        56        66        76        86        96       106       116
         Q8EDL6_SHEON    27 DQKLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVLKK 116
               SCOP domains d1m1pb_ B:  Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain         SCOP domains
               CATH domains 1m1pB00 B: 2-91 Flavocytochrome C3; Chain A                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhh-.hhhhhhhhhh....hhhhhhhhhhhhhhhhhh...hhhhh...hhhhh......................hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                 1m1p B   2 DQKLSDFHAE-GGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVLKK  91
                                    11 |      21        31        41        51        61        71        81        91
                                    11 |                                                                              
                                      13

Chain C from PDB  Type:PROTEIN  Length:86
 aligned with Q8EDL6_SHEON | Q8EDL6 from UniProtKB/TrEMBL  Length:116

    Alignment length:87
                                    37        47        57        67        77        87        97       107       
         Q8EDL6_SHEON    28 QKLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVL 114
               SCOP domains d1m1pc_ C:  Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain      SCOP domains
               CATH domains 1m1pC00 C: 3-89 Flavocytochrome C3; Chain A                                             CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhh-hhhhhhhhhh....hhhhhhhhhhhhhhhhhh...hhhhh...hhhhh......................hhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------- Transcript
                 1m1p C   3 QKLSDFHAES-GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVL  89
                                    12 |      22        32        42        52        62        72        82       
                                    12 |                                                                           
                                      14

Chain D from PDB  Type:PROTEIN  Length:86
 aligned with Q8EDL6_SHEON | Q8EDL6 from UniProtKB/TrEMBL  Length:116

    Alignment length:86
                                    38        48        58        68        78        88        98       108      
         Q8EDL6_SHEON    29 KLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVL 114
               SCOP domains d1m1pd_ D: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain      SCOP domains
               CATH domains 1m1pD00 D:4-89 Flavocytochrome C3; Chain A                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...hhhhh...hhhhh......................hhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 1m1p D   4 KLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVL  89
                                    13        23        33        43        53        63        73        83

Chain E from PDB  Type:PROTEIN  Length:88
 aligned with Q8EDL6_SHEON | Q8EDL6 from UniProtKB/TrEMBL  Length:116

    Alignment length:88
                                    36        46        56        66        76        86        96       106        
         Q8EDL6_SHEON    27 DQKLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVL 114
               SCOP domains d1m1pe_ E: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain        SCOP domains
               CATH domains 1m1pE00 E:2-89 Flavocytochrome C3; Chain A                                               CATH domains
               Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh...hhhhh...hhhhh............hhhhh.....hhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------- Transcript
                 1m1p E   2 DQKLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVL  89
                                    11        21        31        41        51        61        71        81

Chain F from PDB  Type:PROTEIN  Length:88
 aligned with Q8EDL6_SHEON | Q8EDL6 from UniProtKB/TrEMBL  Length:116

    Alignment length:88
                                    36        46        56        66        76        86        96       106        
         Q8EDL6_SHEON    27 DQKLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVL 114
               SCOP domains d1m1pf_ F: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain        SCOP domains
               CATH domains 1m1pF00 F:2-89 Flavocytochrome C3; Chain A                                               CATH domains
               Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhh..hhhhhhhhhh....hhhhhhhhhhhhhhhhhh...hhhhh...hhhhh......................hhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------- Transcript
                 1m1p F   2 DQKLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTSASVL  89
                                    11        21        31        41        51        61        71        81

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: Multiheme cytochromes (149)

Superfamily: Multiheme cytochromes (149)

Family: Di-heme elbow motif (53)

Protein domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain (22)

Shewanella oneidensis [TaxId: 70863] (3)

1a	d1m1pa_	A:
1b	d1m1pb_	B:
1c	d1m1pc_	C:
1d	d1m1pd_	D:
1e	d1m1pe_	E:
1f	d1m1pf_	F:

Asymmetric Unit

Classes(

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Organisms( (-)

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Class: Mainly Alpha (13335)

Architecture: Orthogonal Bundle (10391)

Topology: Flavocytochrome C3; Chain A, domain 2 (23)

Homologous Superfamily: Flavocytochrome C3; Chain A (23)

Shewanella oneidensis. Organism_taxid: 70863. Strain: strain mr1 (2)

1a	1m1pB00	B:2-91
1b	1m1pA00	A:2-89
1c	1m1pE00	E:2-89
1d	1m1pF00	F:2-89
1e	1m1pC00	C:3-89
1f	1m1pD00	D:4-89

(no "Pfam Domain" information available for 1M1P)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (Q8EDL6_SHEON | Q8EDL6)

molecular function
	GO:0009055		electron carrier activity		Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
	GO:0046872		metal ion binding		Interacting selectively and non-covalently with any metal ion.

Asymmetric Unit
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	Cis Peptide Bonds
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	1m1p
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UniProtKB/TrEMBL
	Q8EDL6_SHEON \| Q8EDL6	:	1m1q 1m1r

1m1q	P222 OXIDIZED STRUCTURE OF THE TETRAHEME CYTOCHROME C FROM SHEWANELLA ONEIDENSIS MR1
1m1r	REDUCED P222 CRYSTAL STRUCTURE OF THE TETRAHEME CYTOCHROME C OF SHEWANELLA ONEIDENSIS MR1

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 28)

Sites (28, 28)

SS Bonds (0, 0)

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SCOP Domains (1, 6)

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