Chain A from PDB Type:PROTEIN Length:296
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:296
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351
LACI_ECOLI 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLE 357
SCOP domains d1lbha_ A: Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 1lbhA01 A:62-161,A:291-320 [code=3.40.50.2300, no name defined] 1lbhA02 A:162-290,A:321-337 [code=3.40.50.2300, no name defined] 1lbhA01 A:62-161,A:291-320 1lbhA02 -------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee.....hhhhhhhhhhhhhhhhh.eeeeeee.....hhhhhhhhhhhhh....eeee......hhhhhhh.......eeeee........eeee..hhhhhhhhhhhh......eeee......hhhhhhhhhhhhhh........eeee....hhhhhhhhhhhh......eeeee..hhhhhhhhhhhhh.........eeeeee....hhh.....eeee..hhhhhhhhhhhhhhhhh......eee...eee...............hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D--------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1lbh A 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLE 357
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351
Chain B from PDB Type:PROTEIN Length:296
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:296
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351
LACI_ECOLI 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLE 357
SCOP domains d1lbhb_ B: Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 1lbhB01 B:62-161,B:291-320 [code=3.40.50.2300, no name defined] 1lbhB02 B:162-290,B:321-337 [code=3.40.50.2300, no name defined] 1lbhB01 B:62-161,B:291-320 1lbhB02 -------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee.....hhhhhhhhhhhhhhhhh.eeeeeee.....hhhhhhhhhhhhh....eeee......hhhhhhh.......eeeee........eeee..hhhhhhhhhhhh......eeee......hhhhhhhhhhhhhh........eeee....hhhhhhhhhhhh......eeeee..hhhhhhhhhhhhh.........eeeeee....hhh.....eeee..hhhhhhhhhhhhhhhhh......eee...eee...............hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D--------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1lbh B 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLE 357
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351
Chain C from PDB Type:PROTEIN Length:296
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:296
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351
LACI_ECOLI 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLE 357
SCOP domains d1lbhc_ C: Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 1lbhC01 C:62-161,C:291-320 [code=3.40.50.2300, no name defined] 1lbhC02 C:162-290,C:321-337 [code=3.40.50.2300, no name defined] 1lbhC01 C:62-161,C:291-320 1lbhC02 -------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee.....hhhhhhhhhhhhhhhhh.eeeeeee.....hhhhhhhhhhhhh....eeee......hhhhhhh.......eeeee........eeee..hhhhhhhhhhhh......eeee......hhhhhhhhhhhhhh........eeee....hhhhhhhhhhhh......eeeee..hhhhhhhhhhhhh.........eeeeee....hhh.....eeee..hhhhhhhhhhhhhhhhh......eee...eee...............hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D--------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1lbh C 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLE 357
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351
Chain D from PDB Type:PROTEIN Length:296
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:296
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351
LACI_ECOLI 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLE 357
SCOP domains d1lbhd_ D: Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 1lbhD01 D:62-161,D:291-320 [code=3.40.50.2300, no name defined] 1lbhD02 D:162-290,D:321-337 [code=3.40.50.2300, no name defined] 1lbhD01 D:62-161,D:291-320 1lbhD02 -------------------- CATH domains
Pfam domains (1) -------------------------------------------------------------------------------------------------------------Peripla_BP_3-1lbhD01 D:171-329 ---------------------------- Pfam domains (1)
Pfam domains (2) -------------------------------------------------------------------------------------------------------------Peripla_BP_3-1lbhD02 D:171-329 ---------------------------- Pfam domains (2)
Pfam domains (3) -------------------------------------------------------------------------------------------------------------Peripla_BP_3-1lbhD03 D:171-329 ---------------------------- Pfam domains (3)
Pfam domains (4) -------------------------------------------------------------------------------------------------------------Peripla_BP_3-1lbhD04 D:171-329 ---------------------------- Pfam domains (4)
Sec.struct. author .eeeeee.....hhhhhhhhhhhhhhhhh.eeeeeee.....hhhhhhhhhhhhh....eeee......hhhhhhh.......eeeee........eeee..hhhhhhhhhhhh......eeee......hhhhhhhhhhhhhh........eeee....hhhhhhhhhhhh......eeeee..hhhhhhhhhhhhh.........eeeeee....hhh.....eeee..hhhhhhhhhhhhhhhhh......eee...eee...............hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D--------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1lbh D 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLE 357
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |