Chain A from PDB Type:PROTEIN Length:328
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:328
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
LACI_ECOLI 2 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTT 329
SCOP domains d2pe5a1 A:2-61 Lac repressor (LacR), N-terminal domain d2pe5a2 A:62-329 Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 2pe5A01 A:2-60 lambda repressor-like DNA-binding domains 2pe5A02 A:61-160,A:293-318 [code=3.40.50.2300, no name defined] 2pe5A03 A:161-292,A:319-329 [code=3.40.50.2300, no name defined] 2pe5A02 A:61-160,A:293-3182pe5A03 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhh.hhhhhhhhhhh....hhhhhhhhhhhhhhh....hhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhhhh..eeeeeee...hhhhhhhhhhhhhh.....eeee...hhhhhhhhhhhh....eee..........eeeehhhhhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh......eeee...hhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhhhhh.......eee....hhhhhhh.....eee.hhhhhhhhhhhhhhhhhhh.....eeee..eee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D----------------------------------------------- SAPs(SNPs)
PROSITE (1) --HTH_LACI_2 PDB: A:4-58 UniProt: 4-58 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----HTH_LACI_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2pe5 A 2 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQLLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTT 329
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
Chain B from PDB Type:PROTEIN Length:330
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:330
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331
LACI_ECOLI 2 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLA 331
SCOP domains d2pe5b1 B:2-61 Lac repressor (LacR), N-terminal domain d2pe5b2 B:62-329 Lac-repressor (lacR) core (C-terminal domain) -- SCOP domains
CATH domains 2pe5B01 B:2-60 lambda repressor-like DNA-binding domains 2pe5B02 B:61-160,B:293-318 [code=3.40.50.2300, no name defined] 2pe5B03 B:161-292,B:319-331 [code=3.40.50.2300, no name defined] 2pe5B02 B:61-160,B:293-3182pe5B03 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...hhhhhhhhhh.hhhhhhhhhh......hhhhhhhhhhhh......hhhhhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhh....eee..........eeeehhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh.......eee...hhhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhhhhh........eee....hhhhhhh.....ee..hhhhhhhhhhhhhhhhhhh.....eeee...ee....... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D------------------------------------------------- SAPs(SNPs)
PROSITE (1) --HTH_LACI_2 PDB: B:4-58 UniProt: 4-58 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----HTH_LACI_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2pe5 B 2 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQLLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLA 331
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331
Chain C from PDB Type:PROTEIN Length:328
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:328
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
LACI_ECOLI 2 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTT 329
SCOP domains d2pe5c1 C:2-61 Lac repressor (LacR), N-terminal domain d2pe5c2 C:62-329 Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 2pe5C01 C:2-60 lambda repressor-like DNA-binding domains 2pe5C02 C:61-160,C:293-318 [code=3.40.50.2300, no name defined] 2pe5C03 C:161-292,C:319-329 [code=3.40.50.2300, no name defined] 2pe5C02 C:61-160,C:293-3182pe5C03 CATH domains
Pfam domains (1) ---LacI-2pe5C01 C:5-50 ------------------------------------------------------------------------------------------------------------------------Peripla_BP_3-2pe5C04 C:171-329 Pfam domains (1)
Pfam domains (2) ---LacI-2pe5C02 C:5-50 ------------------------------------------------------------------------------------------------------------------------Peripla_BP_3-2pe5C05 C:171-329 Pfam domains (2)
Pfam domains (3) ---LacI-2pe5C03 C:5-50 ------------------------------------------------------------------------------------------------------------------------Peripla_BP_3-2pe5C06 C:171-329 Pfam domains (3)
Sec.struct. author .......hhhhhh.hhhhhhhhh..........hhhhhhhhhhh....hhhhhhhh.....eeeeeee...hhhhhhhhhhhhhhhhhhh.eeeeeee...hhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhh....eee..........eeeehhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh.......eee...hhhhhhhhhhhhhhh.....eeee.hhhhhhhhhhhhhhh........eee.....hhhhhh.....ee..hhhhhhhhhhhhhhhhhhh.....eeee...ee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D----------------------------------------------- SAPs(SNPs)
PROSITE (1) --HTH_LACI_2 PDB: C:4-58 UniProt: 4-58 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----HTH_LACI_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2pe5 C 2 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQLLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTT 329
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
Chain D from PDB Type:DNA Length:17
2pe5 D 5 TGTGAGCGCTCACAATT 21
14
Chain E from PDB Type:DNA Length:17
2pe5 E 2 AATTGTGAGCGCTCACA 18
11
Chain F from PDB Type:DNA Length:17
2pe5 F 2 AATTGTGAGCGCTCACA 18
11
Legend: |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |