Chain A from PDB Type:PROTEIN Length:329
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:329
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
LACI_ECOLI 2 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTL 330
SCOP domains d1jwla1 A:2-60 Lac repressor (LacR), N-terminal domain d1jwla2 A:61-330 Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 1jwlA01 A:2-59 lambda repressor-like DNA-binding domains 1jwlA02 A:60-160,A:291-317 [code=3.40.50.2300, no name defined] 1jwlA03 A:161-290,A:318-330 [code=3.40.50.2300, no name defined] 1jwlA02 A:60-160,A:291-317 1jwlA03 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhh...hhhhhhhhhh......hhhhhhhhhhhhhhh...hhhhhhhh.....eeeeeee...hhhhhhhhhhhhhhhhhh..eeeeeee...hhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhh....eee..........eeeehhhhhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh......eeee...hhhhhhhhhhhhhhh.....eeee.hhhhhhhhhhhhhh.........eeeeee..hhhhhh....eeee.hhhhhhhhhhhhhhhhhh......eeee..eee...... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D------------------------------------------------ SAPs(SNPs)
PROSITE (1) --HTH_LACI_2 PDB: A:4-58 UniProt: 4-58 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----HTH_LACI_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1jwl A 2 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTL 330
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
Chain B from PDB Type:PROTEIN Length:329
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:329
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
LACI_ECOLI 2 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTL 330
SCOP domains d1jwlb1 B:2-60 Lac repressor (LacR), N-terminal domain d1jwlb2 B:61-330 Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 1jwlB01 B:2-59 lambda repressor-like DNA-binding domains 1jwlB02 B:60-160,B:291-317 [code=3.40.50.2300, no name defined] 1jwlB03 B:161-290,B:318-330 [code=3.40.50.2300, no name defined] 1jwlB02 B:60-160,B:291-317 1jwlB03 CATH domains
Pfam domains (1) ---LacI-1jwlB01 B:5-50 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
Pfam domains (2) ---LacI-1jwlB02 B:5-50 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
Sec.struct. author .....hhhhhh...hhhhhhhhhh......hhhhhhhhhhhhhhh...hhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhhh..eeeeee....hhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhh....eee..........eeeehhhhhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh......eeee...hhhhhhhhhhhhhhh.....eeee.hhhhhhhhhhhhhh.........eeeeee..hhhhhh....eeee.hhhhhhhhhhhhhhhhhh......eeee..eee...... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D------------------------------------------------ SAPs(SNPs)
PROSITE (1) --HTH_LACI_2 PDB: B:4-58 UniProt: 4-58 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----HTH_LACI_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1jwl B 2 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTL 330
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
Chain C from PDB Type:PROTEIN Length:269
aligned with LACI_ECOLI | P03023 from UniProtKB/Swiss-Prot Length:360
Alignment length:269
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
LACI_ECOLI 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTL 330
SCOP domains d1jwlc_ C: Lac-repressor (lacR) core (C-terminal domain) SCOP domains
CATH domains 1jwlC01 C:62-161,C:291-320 [code=3.40.50.2300, no name defined] 1jwlC02 C:162-290,C:321-330 [code=3.40.50.2300, no name defined] 1jwlC01 C:62-161,C:291-320 1jwlC02 CATH domains
Pfam domains (1) -------------------------------------------------------------------------------------------------------------Peripla_BP_3-1jwlC01 C:171-329 - Pfam domains (1)
Pfam domains (2) -------------------------------------------------------------------------------------------------------------Peripla_BP_3-1jwlC02 C:171-329 - Pfam domains (2)
Pfam domains (3) -------------------------------------------------------------------------------------------------------------Peripla_BP_3-1jwlC03 C:171-329 - Pfam domains (3)
Sec.struct. author .eeeeee....hhhhhhhhhhhhhhhhhh..eeeeee....hhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhh....eee..........eeeehhhhhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh......eeee...hhhhhhhhhhhhhhh.....eeee.hhhhhhhhhhhhhh.........eeeeee..hhhhhh....eeee.hhhhhhhhhhhhhhhhhh......eeee..eee...... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D------------------------------------------------ SAPs(SNPs)
PROSITE (1) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1jwl C 62 LLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTL 330
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321
Chain D from PDB Type:DNA Length:14
1jwl D 6 TGTGAGCGGATAAC 19
15
Chain E from PDB Type:DNA Length:14
1jwl E 6 GTTATCCGCTCACA 19
15
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |