1KK4 - JenaLib

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Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF VAT(D) IN COMPLEX WITH ACETYL-COA

Authors :   M. Sugantino, S. L. Roderick

Date :   06 Dec 01 (Deposition) - 20 Feb 02 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.70

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C  (1x)
Biol. Unit 2: D,E,F  (1x)

Keywords :   Antibiotic Resistance, Acyltransferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. Sugantino, S. L. Roderick
Crystal Structure Of Vat(D): An Acetyltransferase That Inactivates Streptogramin Group A Antibiotics.
Biochemistry V. 41 2209 2002
PubMed-ID: 11841212 | Reference-DOI: 10.1021/BI011991B
(for further references see the PDB file header)

Molecule 1 - STREPTOGRAMIN A ACETYLTRANSFERASE
	Chains	:	A, B, C, D, E, F
	EC Number	:	2.3.1.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PET11A
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	SATA
	Organism Scientific	:	ENTEROCOCCUS FAECIUM
	Organism Taxid	:	1352

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:	A	B	C
Biological Unit 2 (1x)	:				D	E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 6)

No.	Name	Count	Type	Full Name
1	ACO	6	Ligand/Ion	ACETYL COENZYME *A

Biological Unit 1 (1, 3)

No.	Name	Count	Type	Full Name
1	ACO	3	Ligand/Ion	ACETYL COENZYME *A

Biological Unit 2 (1, 3)

No.	Name	Count	Type	Full Name
1	ACO	3	Ligand/Ion	ACETYL COENZYME *A

Asymmetric Unit (6, 6)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	TYR A:37 , ILE A:69 , GLY A:70 , TRP A:121 , LYS A:124 , ALA A:141 , ALA A:142 , LEU A:155 , GLY A:157 , GLY A:158 , ILE A:164 , HOH A:3601 , HIS B:82 , MET B:84 , LYS B:111 , MET B:129 , VAL B:147	BINDING SITE FOR RESIDUE ACO A 301
2	AC2	SOFTWARE	TYR B:37 , ILE B:69 , GLY B:70 , TRP B:121 , LYS B:124 , ALA B:141 , ALA B:142 , LEU B:155 , GLY B:157 , GLY B:158 , ILE B:164 , HOH B:3602 , HOH B:3650 , ALA C:80 , HIS C:82 , MET C:84 , LYS C:111 , MET C:129 , VAL C:147 , LYS C:148 , PRO C:160	BINDING SITE FOR RESIDUE ACO B 302
3	AC3	SOFTWARE	HIS A:82 , MET A:84 , LYS A:111 , VAL A:147 , LYS A:148 , PRO A:160 , TYR C:37 , ILE C:69 , GLY C:70 , TRP C:121 , ILE C:122 , GLY C:123 , LYS C:124 , ALA C:141 , ALA C:142 , LEU C:155 , GLY C:157 , GLY C:158 , ILE C:164 , HOH C:3590 , HOH C:3609 , HOH C:3649	BINDING SITE FOR RESIDUE ACO C 303
4	AC4	SOFTWARE	TYR D:37 , ILE D:69 , GLY D:70 , TRP D:121 , ILE D:122 , LYS D:124 , ALA D:141 , ALA D:142 , LEU D:155 , GLY D:157 , GLY D:158 , ILE D:164 , HOH D:3587 , HOH D:3642 , TYR E:52 , HIS E:82 , MET E:84 , LYS E:111 , MET E:129 , VAL E:147 , PRO E:160	BINDING SITE FOR RESIDUE ACO D 304
5	AC5	SOFTWARE	TYR E:37 , ILE E:69 , GLY E:70 , TRP E:121 , ILE E:122 , LYS E:124 , ALA E:141 , ALA E:142 , LEU E:155 , GLY E:157 , GLY E:158 , ILE E:164 , HOH E:3589 , HOH E:3605 , HOH E:3647 , HIS F:82 , MET F:84 , LYS F:111 , VAL F:147	BINDING SITE FOR RESIDUE ACO E 305
6	AC6	SOFTWARE	TYR D:52 , HIS D:82 , MET D:84 , LYS D:111 , VAL D:147 , PRO D:160 , TYR F:37 , ASP F:39 , ILE F:69 , GLY F:70 , TRP F:121 , ILE F:122 , LYS F:124 , ALA F:141 , ALA F:142 , LEU F:155 , GLY F:157 , GLY F:158 , ILE F:164 , HOH F:3606 , HOH F:3607	BINDING SITE FOR RESIDUE ACO F 306

(no "SS Bond" information available for 1KK4)

Asymmetric Unit

No.	Residues
1	Asn A:159	-	Pro A:160
2	Asn B:159	-	Pro B:160
3	Asn C:159	-	Pro C:160
4	Asn D:159	-	Pro D:160
5	Asn E:159	-	Pro E:160
6	Asn F:159	-	Pro F:160

(no "SAP(SNP)/Variant" information available for 1KK4)

Asymmetric Unit (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HEXAPEP_TRANSFERASES	PS00101	Hexapeptide-repeat containing-transferases signature.	VATD_ENTFC	122-150	6	A:122-150 B:122-150 C:122-150 D:122-150 E:122-150 F:122-150

Biological Unit 1 (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HEXAPEP_TRANSFERASES	PS00101	Hexapeptide-repeat containing-transferases signature.	VATD_ENTFC	122-150	3	A:122-150 B:122-150 C:122-150 - - -

Biological Unit 2 (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HEXAPEP_TRANSFERASES	PS00101	Hexapeptide-repeat containing-transferases signature.	VATD_ENTFC	122-150	3	- - - D:122-150 E:122-150 F:122-150

(no "Exon" information available for 1KK4)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:205
 aligned with VATD_ENTFC | P50870 from UniProtKB/Swiss-Prot  Length:209

    Alignment length:205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200     
           VATD_ENTFC     1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREV 205
               SCOP domains d1kk4a_ A: Xenobiotic acetyltransferase                                                                                                                                                                       SCOP domains
               CATH domains 1kk4A00 A:1-205 Hexapeptide repeat proteins                                                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeehhhhhh....eee....eee.....hhhh.ee..hhhhh..eee....ee....eee.hhhh........hhhhhh.hhhhhh.hhhhh.....eee....ee....ee....ee....ee....ee.......eeee....eeeee..hhhhhhhhhhhhhhhhhhhhhh.hhhhhhh.hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         ------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1kk4 A   1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREV 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200

Chain B from PDB  Type:PROTEIN  Length:205
 aligned with VATD_ENTFC | P50870 from UniProtKB/Swiss-Prot  Length:209

    Alignment length:205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200     
           VATD_ENTFC     1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREV 205
               SCOP domains d1kk4b_ B: Xenobiotic acetyltransferase                                                                                                                                                                       SCOP domains
               CATH domains 1kk4B00 B:1-205 Hexapeptide repeat proteins                                                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeehhhhhh....eee....eee.....hhhh.ee..hhhhh..eee....ee....eee.hhhh.........hhhhh.hhhhhh.hhhhh.....eee....ee....ee....ee....ee....ee.......eeee....eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         ------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1kk4 B   1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREV 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200

Chain C from PDB  Type:PROTEIN  Length:205
 aligned with VATD_ENTFC | P50870 from UniProtKB/Swiss-Prot  Length:209

    Alignment length:205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200     
           VATD_ENTFC     1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREV 205
               SCOP domains d1kk4c_ C: Xenobiotic acetyltransferase                                                                                                                                                                       SCOP domains
               CATH domains 1kk4C00 C:1-205 Hexapeptide repeat proteins                                                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeehhhhhh....eee....eee.....hhhh.ee..hhhhh..eee....ee....eee.hhhh........hhhhhh..hhhhh.hhhhh.....eee....ee....ee....ee....ee....ee.......eeee....eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         ------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1kk4 C   1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREV 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200

Chain D from PDB  Type:PROTEIN  Length:206
 aligned with VATD_ENTFC | P50870 from UniProtKB/Swiss-Prot  Length:209

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
           VATD_ENTFC     1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREVI 206
               SCOP domains d1kk4d_ D: Xenobiotic acetyltransferase                                                                                                                                                                        SCOP domains
               CATH domains 1kk4D00 D:1-206 Hexapeptide repeat proteins                                                                                                                                                                    CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeehhhhhh....eee....eee.....hhhh.ee..hhhhh..eee....ee....eee.hhhh........hhhhhh.hhhhhh.hhhhh.....eee....ee....ee....ee....ee....ee.......eeee....eeeee..hhhhhhhhhhhhhhhhhhhhhh.hhhhhhh...hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         -------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1kk4 D   1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREVI 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200

Chain E from PDB  Type:PROTEIN  Length:206
 aligned with VATD_ENTFC | P50870 from UniProtKB/Swiss-Prot  Length:209

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
           VATD_ENTFC     1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREVI 206
               SCOP domains d1kk4e_ E: Xenobiotic acetyltransferase                                                                                                                                                                        SCOP domains
               CATH domains 1kk4E00 E:1-206 Hexapeptide repeat proteins                                                                                                                                                                    CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeehhhhhh....eee....eee.....hhhh.ee..hhhhh..eee....ee....eee.hhhh........hhhhhh.hhhhhh.hhhhh.....eee....ee....ee....ee....ee....ee.......eeee....eeeee..hhhhhhhhhhhhhhhhhhhhhh.hhhhhhh.hhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         -------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1kk4 E   1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREVI 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200

Chain F from PDB  Type:PROTEIN  Length:206
 aligned with VATD_ENTFC | P50870 from UniProtKB/Swiss-Prot  Length:209

    Alignment length:206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
           VATD_ENTFC     1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREVI 206
               SCOP domains d1kk4f_ F: Xenobiotic acetyltransferase                                                                                                                                                                        SCOP domains
               CATH domains 1kk4F00 F:1-206 Hexapeptide repeat proteins                                                                                                                                                                    CATH domains
           Pfam domains (1) ----------------------------------------------------------------------------------------------------------------Hexapep-1kk4F01 F:113-148           ---------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ----------------------------------------------------------------------------------------------------------------Hexapep-1kk4F02 F:113-148           ---------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) ----------------------------------------------------------------------------------------------------------------Hexapep-1kk4F03 F:113-148           ---------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) ----------------------------------------------------------------------------------------------------------------Hexapep-1kk4F04 F:113-148           ---------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) ----------------------------------------------------------------------------------------------------------------Hexapep-1kk4F05 F:113-148           ---------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) ----------------------------------------------------------------------------------------------------------------Hexapep-1kk4F06 F:113-148           ---------------------------------------------------------- Pfam domains (6)
         Sec.struct. author ................eeehhhhh.....eee....eee.....hhhh.ee..hhhhh..eee....ee....eee.hhhh........hhhhhh..hhhhh.hhhhh.....eee....ee....ee....ee....ee....ee.......eeee....eeeee..hhhhhhhhhhhhhhhhhhhhhh.hhhhhh.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------HEXAPEP_TRANSFERASES         -------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1kk4 F   1 MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREVI 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Single-stranded left-handed beta-helix (154)

Superfamily: Trimeric LpxA-like enzymes (147)

Family: Galactoside acetyltransferase-like (21)

Protein domain: Xenobiotic acetyltransferase (10)

Enterococcus faecium, VAT(D) [TaxId: 1352] (8)

1a	d1kk4a_	A:
1b	d1kk4b_	B:
1c	d1kk4c_	C:
1d	d1kk4d_	D:
1e	d1kk4e_	E:
1f	d1kk4f_	F:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: 3 Solenoid (196)

Topology: UDP N-Acetylglucosamine Acyltransferase; domain 1 (90)

Homologous Superfamily: Hexapeptide repeat proteins (85)

Enterococcus faecium. Organism_taxid: 1352. (4)

1a	1kk4A00	A:1-205
1b	1kk4B00	B:1-205
1c	1kk4C00	C:1-205
1d	1kk4D00	D:1-206
1e	1kk4E00	E:1-206
1f	1kk4F00	F:1-206

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: Hexapep] (52)

Family: Hexapep (52)

Enterococcus faecium (Streptococcus faecium) (6)

1a	Hexapep-1kk4F01	F:113-148
1b	Hexapep-1kk4F02	F:113-148
1c	Hexapep-1kk4F03	F:113-148
1d	Hexapep-1kk4F04	F:113-148
1e	Hexapep-1kk4F05	F:113-148
1f	Hexapep-1kk4F06	F:113-148

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (VATD_ENTFC | P50870)

molecular function
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
	GO:0046677	response to antibiotic	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.

Asymmetric Unit
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	Cis Peptide Bonds
		Asn A:159 - Pro A:160	[ RasMol ]
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		Asn C:159 - Pro C:160	[ RasMol ]
		Asn D:159 - Pro D:160	[ RasMol ]
		Asn E:159 - Pro E:160	[ RasMol ]
		Asn F:159 - Pro F:160	[ RasMol ]

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Access by PDB/NDB ID
	1kk4
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
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Access by UniProt ID/Accession number
	VATD_ENTFC \| P50870
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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	VATD_ENTFC \| P50870
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	VATD_ENTFC \| P50870	:	1khr 1kk5 1kk6 1mr7 1mr9 1mrl 3dho

1kk5	CRYSTAL STRUCTURE OF VAT(D) (FORM II)
1kk6	CRYSTAL STRUCTURE OF VAT(D) (FORM I)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 6)

Sites (6, 6)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 6)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 6)

CATH Domains (1, 6)

Pfam Domains (1, 6)

Gene Ontology (3, 3)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File