1EG4 - JenaLib

Asymmetric/Biological Unit (9, 9)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.2b	ENST00000308775	2b	ENSE00001229426	chr3:49507565-49507866	302	DAG1_HUMAN	-	0	0	-	-
1.8m	ENST00000308775	8m	ENSE00001204501	chr3:49547852-49548252	401	DAG1_HUMAN	1-95	95	0	-	-
1.9e	ENST00000308775	9e	ENSE00001229433	chr3:49568230-49573044	4815	DAG1_HUMAN	96-895	800	1	P:2-14	13

2.2b	ENST00000357033	2b	ENSE00001899141	X:33229636-33229399	238	DMD_HUMAN	1-11	11	0	-	-
2.7b	ENST00000357033	7b	ENSE00001435901	X:33038317-33038256	62	DMD_HUMAN	11-31	21	0	-	-
2.9a	ENST00000357033	9a	ENSE00001614720	X:32867937-32867845	93	DMD_HUMAN	32-62	31	0	-	-
2.10	ENST00000357033	10	ENSE00001640206	X:32862977-32862900	78	DMD_HUMAN	63-88	26	0	-	-
2.11	ENST00000357033	11	ENSE00001685282	X:32841504-32841412	93	DMD_HUMAN	89-119	31	0	-	-
2.12a	ENST00000357033	12a	ENSE00001789498	X:32834757-32834585	173	DMD_HUMAN	120-177	58	0	-	-
2.13	ENST00000357033	13	ENSE00001436342	X:32827728-32827610	119	DMD_HUMAN	177-217	41	0	-	-
2.14	ENST00000357033	14	ENSE00001436506	X:32717410-32717229	182	DMD_HUMAN	217-277	61	0	-	-
2.15	ENST00000357033	15	ENSE00001434995	X:32716115-32715987	129	DMD_HUMAN	278-320	43	0	-	-
2.16	ENST00000357033	16	ENSE00001435581	X:32663269-32663081	189	DMD_HUMAN	321-383	63	0	-	-
2.17	ENST00000357033	17	ENSE00001435687	X:32662430-32662249	182	DMD_HUMAN	384-444	61	0	-	-
2.18	ENST00000357033	18	ENSE00001435796	X:32632570-32632420	151	DMD_HUMAN	444-494	51	0	-	-
2.19	ENST00000357033	19	ENSE00001436736	X:32613993-32613874	120	DMD_HUMAN	495-534	40	0	-	-
2.20	ENST00000357033	20	ENSE00001034188	X:32591963-32591862	102	DMD_HUMAN	535-568	34	0	-	-
2.21c	ENST00000357033	21c	ENSE00001479014	X:32591754-32591647	108	DMD_HUMAN	569-604	36	0	-	-
2.22	ENST00000357033	22	ENSE00001434823	X:32583998-32583819	180	DMD_HUMAN	605-664	60	0	-	-
2.23	ENST00000357033	23	ENSE00001435605	X:32563451-32563276	176	DMD_HUMAN	665-723	59	0	-	-
2.24a	ENST00000357033	24a	ENSE00001436267	X:32536248-32536125	124	DMD_HUMAN	723-764	42	0	-	-
2.25	ENST00000357033	25	ENSE00001436655	X:32519959-32519872	88	DMD_HUMAN	765-794	30	0	-	-
2.26	ENST00000357033	26	ENSE00001436512	X:32509635-32509394	242	DMD_HUMAN	794-874	81	0	-	-
2.27	ENST00000357033	27	ENSE00001435151	X:32503216-32503036	181	DMD_HUMAN	875-935	61	0	-	-
2.28	ENST00000357033	28	ENSE00001435583	X:32490426-32490281	146	DMD_HUMAN	935-983	49	0	-	-
2.29	ENST00000357033	29	ENSE00001435180	X:32486827-32486615	213	DMD_HUMAN	984-1054	71	0	-	-
2.30	ENST00000357033	30	ENSE00001436271	X:32482816-32482703	114	DMD_HUMAN	1055-1092	38	0	-	-
2.31	ENST00000357033	31	ENSE00001435906	X:32481711-32481556	156	DMD_HUMAN	1093-1144	52	0	-	-
2.32	ENST00000357033	32	ENSE00001436731	X:32472949-32472779	171	DMD_HUMAN	1145-1201	57	0	-	-
2.33	ENST00000357033	33	ENSE00001436545	X:32466755-32466573	183	DMD_HUMAN	1202-1262	61	0	-	-
2.34	ENST00000357033	34	ENSE00001435146	X:32459431-32459297	135	DMD_HUMAN	1263-1307	45	0	-	-
2.35	ENST00000357033	35	ENSE00001434999	X:32456507-32456358	150	DMD_HUMAN	1308-1357	50	0	-	-
2.38	ENST00000357033	38	ENSE00001434585	X:32430030-32429869	162	DMD_HUMAN	1358-1411	54	0	-	-
2.39	ENST00000357033	39	ENSE00001435573	X:32408298-32408188	111	DMD_HUMAN	1412-1448	37	0	-	-
2.40	ENST00000357033	40	ENSE00001435218	X:32407791-32407618	174	DMD_HUMAN	1449-1506	58	0	-	-
2.41	ENST00000357033	41	ENSE00001436039	X:32404582-32404427	156	DMD_HUMAN	1507-1558	52	0	-	-
2.42	ENST00000357033	42	ENSE00001435954	X:32398797-32398627	171	DMD_HUMAN	1559-1615	57	0	-	-
2.43	ENST00000357033	43	ENSE00000978409	X:32383316-32383137	180	DMD_HUMAN	1616-1675	60	0	-	-
2.44b	ENST00000357033	44b	ENSE00001157370	X:32382827-32382699	129	DMD_HUMAN	1676-1718	43	0	-	-
2.45	ENST00000357033	45	ENSE00001434721	X:32381075-32380905	171	DMD_HUMAN	1719-1775	57	0	-	-
2.46a	ENST00000357033	46a	ENSE00001435398	X:32366645-32366523	123	DMD_HUMAN	1776-1816	41	0	-	-
2.47	ENST00000357033	47	ENSE00001436772	X:32364197-32364060	138	DMD_HUMAN	1817-1862	46	0	-	-
2.48	ENST00000357033	48	ENSE00001435120	X:32361403-32361251	153	DMD_HUMAN	1863-1913	51	0	-	-
2.50	ENST00000357033	50	ENSE00001435597	X:32360399-32360217	183	DMD_HUMAN	1914-1974	61	0	-	-
2.51	ENST00000357033	51	ENSE00001435825	X:32328393-32328199	195	DMD_HUMAN	1975-2039	65	0	-	-
2.52	ENST00000357033	52	ENSE00001434843	X:32305818-32305646	173	DMD_HUMAN	2040-2097	58	0	-	-
2.53	ENST00000357033	53	ENSE00001434686	X:32235180-32235033	148	DMD_HUMAN	2097-2146	50	0	-	-
2.55	ENST00000357033	55	ENSE00001657981	X:31986631-31986456	176	DMD_HUMAN	2147-2205	59	0	-	-
2.56b	ENST00000357033	56b	ENSE00001774237	X:31950344-31950197	148	DMD_HUMAN	2205-2254	50	0	-	-
2.57a	ENST00000357033	57a	ENSE00001617885	X:31947862-31947713	150	DMD_HUMAN	2255-2304	50	0	-	-
2.58	ENST00000357033	58	ENSE00001704105	X:31893490-31893305	186	DMD_HUMAN	2305-2366	62	0	-	-
2.59a	ENST00000357033	59a	ENSE00001754131	X:31854936-31854835	102	DMD_HUMAN	2367-2400	34	0	-	-
2.60	ENST00000357033	60	ENSE00001746471	X:31838200-31838092	109	DMD_HUMAN	2401-2437	37	0	-	-
2.61	ENST00000357033	61	ENSE00001616109	X:31792309-31792077	233	DMD_HUMAN	2437-2514	78	0	-	-
2.62b	ENST00000357033	62b	ENSE00001213215	X:31747865-31747748	118	DMD_HUMAN	2515-2554	40	0	-	-
2.63	ENST00000357033	63	ENSE00001258577	X:31697703-31697492	212	DMD_HUMAN	2554-2624	71	0	-	-
2.64	ENST00000357033	64	ENSE00001213199	X:31676261-31676107	155	DMD_HUMAN	2625-2676	52	0	-	-
2.65	ENST00000357033	65	ENSE00001258641	X:31645979-31645790	190	DMD_HUMAN	2676-2739	64	0	-	-
2.67	ENST00000357033	67	ENSE00001259225	X:31525570-31525398	173	DMD_HUMAN	2740-2797	58	0	-	-
2.68	ENST00000357033	68	ENSE00001259203	X:31515061-31514905	157	DMD_HUMAN	2797-2849	53	0	-	-
2.69	ENST00000357033	69	ENSE00001259198	X:31497220-31497100	121	DMD_HUMAN	2850-2890	41	0	-	-
2.70b	ENST00000357033	70b	ENSE00001259193	X:31496491-31496223	269	DMD_HUMAN	2890-2979	90	0	-	-
2.71	ENST00000357033	71	ENSE00001259171	X:31462744-31462598	147	DMD_HUMAN	2980-3028	49	0	-	-
2.73	ENST00000357033	73	ENSE00001259181	X:31366751-31366673	79	DMD_HUMAN	3029-3055	27	1	A:47-55	9
2.74	ENST00000357033	74	ENSE00001213363	X:31341775-31341715	61	DMD_HUMAN	3055-3075	21	1	A:55-75	21
2.76	ENST00000357033	76	ENSE00001733920	X:31279133-31279072	62	DMD_HUMAN	3075-3096	22	1	A:75-96	22
2.77	ENST00000357033	77	ENSE00001674239	X:31241238-31241164	75	DMD_HUMAN	3096-3121	26	1	A:96-121	26
2.78b	ENST00000357033	78b	ENSE00001158950	X:31227816-31227615	202	DMD_HUMAN	3121-3188	68	1	A:121-188	68
2.79a	ENST00000357033	79a	ENSE00001158943	X:31224784-31224699	86	DMD_HUMAN	3188-3217	30	1	A:188-217	30
2.80	ENST00000357033	80	ENSE00001158937	X:31222235-31222078	158	DMD_HUMAN	3217-3269	53	1	A:217-269	53
2.81b	ENST00000357033	81b	ENSE00001034045	X:31201021-31200855	167	DMD_HUMAN	3270-3325	56	1	A:270-306	37
2.82	ENST00000357033	82	ENSE00001158926	X:31198598-31198487	112	DMD_HUMAN	3325-3362	38	0	-	-
2.83a	ENST00000357033	83a	ENSE00001034039	X:31196922-31196786	137	DMD_HUMAN	3363-3408	46	0	-	-
2.84	ENST00000357033	84	ENSE00001158912	X:31196087-31196049	39	DMD_HUMAN	3408-3421	14	0	-	-
2.85	ENST00000357033	85	ENSE00001158905	X:31191721-31191656	66	DMD_HUMAN	3421-3443	23	0	-	-
2.86	ENST00000357033	86	ENSE00001158901	X:31190530-31190465	66	DMD_HUMAN	3443-3465	23	0	-	-
2.87b	ENST00000357033	87b	ENSE00001158895	X:31187718-31187560	159	DMD_HUMAN	3465-3518	54	0	-	-
2.88	ENST00000357033	88	ENSE00001158887	X:31165635-31165392	244	DMD_HUMAN	3518-3599	82	0	-	-
2.89	ENST00000357033	89	ENSE00001034085	X:31164531-31164408	124	DMD_HUMAN	3600-3641	42	0	-	-
2.90	ENST00000357033	90	ENSE00001158874	X:31152311-31152219	93	DMD_HUMAN	3641-3672	32	0	-	-
2.91b	ENST00000357033	91b	ENSE00001436107	X:31144790-31144759	32	DMD_HUMAN	3672-3682	11	0	-	-
2.92e	ENST00000357033	92e	ENSE00001788214	X:31140047-31137345	2703	DMD_HUMAN	3683-3685	3	0	-	-

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (DMD_HUMAN | P11532)

molecular function
	GO:0003779	actin binding	Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
	GO:0002162	dystroglycan binding	Interacting selectively and non-covalently with dystroglycan. Dystroglycan is glycoprotein found in non-muscle tissues as well as in muscle tissues, often in association with dystrophin. The native dystroglycan cleaved into two non-covalently associated subunits, alpha (N-terminal) and beta (C-terminal).
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0017022	myosin binding	Interacting selectively and non-covalently with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments.
	GO:0050998	nitric-oxide synthase binding	Interacting selectively and non-covalently with the enzyme nitric-oxide synthase.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0005200	structural constituent of cytoskeleton	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.
	GO:0008307	structural constituent of muscle	The action of a molecule that contributes to the structural integrity of a muscle fiber.
	GO:0017166	vinculin binding	Interacting selectively and non-covalently with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0086001	cardiac muscle cell action potential	An action potential that occurs in a cardiac muscle cell.
	GO:0060048	cardiac muscle contraction	Muscle contraction of cardiac muscle tissue.
	GO:0043623	cellular protein complex assembly	The aggregation, arrangement and bonding together of a set of components to form a protein complex, occurring at the level of an individual cell.
	GO:0034613	cellular protein localization	Any process in which a protein is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell.
	GO:0044458	motile cilium assembly	The aggregation, arrangement and bonding together of a set of components to form a motile cilium.
	GO:0016203	muscle attachment	The developmental process in which a skeletal muscle attaches to its target (such as bone or body wall).
	GO:0046716	muscle cell cellular homeostasis	The cellular homeostatic process that preserves a muscle cell in a stable functional or structural state.
	GO:0048747	muscle fiber development	The process whose specific outcome is the progression of the muscle fiber over time, from its formation to the mature structure. In skeletal muscle, fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.
	GO:0030049	muscle filament sliding	The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated.
	GO:0007517	muscle organ development	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.
	GO:1902083	negative regulation of peptidyl-cysteine S-nitrosylation	Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-cysteine S-nitrosylation.
	GO:0033137	negative regulation of peptidyl-serine phosphorylation	Any process that stops, prevents, or reduces the frequency, rate or extent of the phosphorylation of peptidyl-serine.
	GO:0043043	peptide biosynthetic process	The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.
	GO:0045666	positive regulation of neuron differentiation	Any process that activates or increases the frequency, rate or extent of neuron differentiation.
	GO:0010976	positive regulation of neuron projection development	Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
	GO:2000651	positive regulation of sodium ion transmembrane transporter activity	Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transporter activity.
	GO:0010881	regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion	Any process that modulates the frequency, rate or extent of cardiac muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.
	GO:0090287	regulation of cellular response to growth factor stimulus	Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.
	GO:0002027	regulation of heart rate	Any process that modulates the frequency or rate of heart contraction.
	GO:0010880	regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum	Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.
	GO:0060314	regulation of ryanodine-sensitive calcium-release channel activity	Any process that modulates the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
	GO:0014819	regulation of skeletal muscle contraction	Any process that modulates the frequency, rate or extent of skeletal muscle contraction.
	GO:0014809	regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion	Any process that modulates the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.
	GO:1901385	regulation of voltage-gated calcium channel activity	Any process that modulates the frequency, rate or extent of voltage-gated calcium channel activity.
	GO:0035994	response to muscle stretch	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a myofibril being extended beyond its slack length.
cellular component
	GO:0030018	Z disc	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.
	GO:0015629	actin cytoskeleton	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
	GO:0030054	cell junction	A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
	GO:0009986	cell surface	The external part of the cell wall and/or plasma membrane.
	GO:0030055	cell-substrate junction	A cell junction that forms a connection between a cell and the extracellular matrix.
	GO:0043034	costamere	Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0016010	dystrophin-associated glycoprotein complex	A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase.
	GO:0030175	filopodium	Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.
	GO:0031527	filopodium membrane	The portion of the plasma membrane surrounding a filopodium.
	GO:0016328	lateral plasma membrane	The portion of the plasma membrane at the lateral side of the cell. In epithelial cells, lateral plasma membranes are on the sides of cells which lie at the interface of adjacent cells.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0045121	membrane raft	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
	GO:0044306	neuron projection terminus	The specialized, terminal region of a neuron projection such as an axon or a dendrite.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0045211	postsynaptic membrane	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.
	GO:0043234	protein complex	A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.
	GO:0042383	sarcolemma	The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.
	GO:0045202	synapse	The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
	GO:0016013	syntrophin complex	A protein complex that includes alpha-, beta1-, beta2-syntrophins and syntrophin-like proteins; the syntrophin complex binds to the second half of the carboxy-terminal domain of dystrophin; also associates with neuronal nitric oxide synthase.

Chain P (DAG1_HUMAN | Q14118)

molecular function
	GO:0042169	SH2 domain binding	Interacting selectively and non-covalently with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class.
	GO:0003779	actin binding	Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
	GO:0051393	alpha-actinin binding	Interacting selectively and non-covalently with alpha-actinin, one of a family of proteins that cross-link F-actin as antiparallel homodimers. Alpha-actinin has a molecular mass of 93-103 KDa; at the N-terminus there are two calponin homology domains, at the C-terminus there are two EF-hands. These two domains are connected by the rod domain. This domain is formed by triple-helical spectrin repeats.
	GO:0005509	calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).
	GO:0002162	dystroglycan binding	Interacting selectively and non-covalently with dystroglycan. Dystroglycan is glycoprotein found in non-muscle tissues as well as in muscle tissues, often in association with dystrophin. The native dystroglycan cleaved into two non-covalently associated subunits, alpha (N-terminal) and beta (C-terminal).
	GO:0043237	laminin-1 binding	Interacting selectively and non-covalently with laminin-1, a glycoprotein trimer with the subunit composition alpha1, beta1, gamma1.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0032403	protein complex binding	Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0008307	structural constituent of muscle	The action of a molecule that contributes to the structural integrity of a muscle fiber.
	GO:0015631	tubulin binding	Interacting selectively and non-covalently with monomeric or multimeric forms of tubulin, including microtubules.
	GO:0017166	vinculin binding	Interacting selectively and non-covalently with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane.
	GO:0001618	virus receptor activity	Combining with a virus component and mediating entry of the virus into the cell.
biological process
	GO:0006607	NLS-bearing protein import into nucleus	The directed movement of a protein bearing a nuclear localization signal (NLS) from the cytoplasm into the nucleus, across the nuclear membrane.
	GO:0014044	Schwann cell development	The process aimed at the progression of a Schwann cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function.
	GO:0071711	basement membrane organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the basement membrane.
	GO:0060445	branching involved in salivary gland morphogenesis	The process in which the branching structure of the salivary gland is generated and organized.
	GO:0016340	calcium-dependent cell-matrix adhesion	The binding of a cell to the extracellular matrix via adhesion molecules that require the presence of calcium for the interaction.
	GO:0071679	commissural neuron axon guidance	The process in which the migration of an axon growth cone of a commissural neuron is directed to its target in the brain in response to a combination of attractive and repulsive cues.
	GO:0007016	cytoskeletal anchoring at plasma membrane	A cytoskeleton organization process that directly or indirectly links cytoskeletal filaments to the plasma membrane.
	GO:0060441	epithelial tube branching involved in lung morphogenesis	The process in which a highly ordered sequence of patterning events generates the branched epithelial tubes of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.
	GO:0030198	extracellular matrix organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix.
	GO:0006509	membrane protein ectodomain proteolysis	The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain).
	GO:0034453	microtubule anchoring	Any process in which a microtubule is maintained in a specific location in a cell.
	GO:0019048	modulation by virus of host morphology or physiology	The process in which a virus effects a change in the structure or processes of its host organism.
	GO:0002011	morphogenesis of an epithelial sheet	The process in which the anatomical structures of an epithelial sheet are generated and organized. An epithelial sheet is a flat surface consisting of closely packed epithelial cells.
	GO:0022011	myelination in peripheral nervous system	The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.
	GO:0043409	negative regulation of MAPK cascade	Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade.
	GO:0030336	negative regulation of cell migration	Any process that stops, prevents, or reduces the frequency, rate or extent of cell migration.
	GO:0051898	negative regulation of protein kinase B signaling	Any process that stops, prevents, or reduces the frequency, rate or extent of protein kinase B signaling, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B.
	GO:0021682	nerve maturation	A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state.
	GO:1904261	positive regulation of basement membrane assembly involved in embryonic body morphogenesis	Any process that activates or increases the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.
	GO:0006493	protein O-linked glycosylation	A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or via the phenol group of peptidyl-tyrosine, forming an O-glycan.
	GO:0016476	regulation of embryonic cell shape	Any process that modulates the surface configuration of an embryonic cell.
	GO:0010717	regulation of epithelial to mesenchymal transition	Any process that modulates the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
	GO:0010470	regulation of gastrulation	Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals.
	GO:0043434	response to peptide hormone	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals.
	GO:0046718	viral entry into host cell	The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
	GO:0016032	viral process	A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
cellular component
	GO:0005604	basement membrane	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers.
	GO:0016323	basolateral plasma membrane	The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.
	GO:0030054	cell junction	A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
	GO:0009279	cell outer membrane	A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.
	GO:0005913	cell-cell adherens junction	An adherens junction which connects a cell to another cell.
	GO:0005911	cell-cell junction	A cell junction that forms a connection between two or more cells in a multicellular organism; excludes direct cytoplasmic junctions such as ring canals.
	GO:0070938	contractile ring	A cytoskeletal structure composed of filamentous protein that forms beneath the membrane of many cells or organelles, in the plane of cell or organelle division. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells or organelles.
	GO:0043034	costamere	Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0016011	dystroglycan complex	A protein complex that includes alpha- and beta-dystroglycan, which are alternative products of the same gene; the laminin-binding component of the dystrophin-associated glycoprotein complex, providing a link between the subsarcolemmal cytoskeleton (in muscle cells) and the extracellular matrix. Alpha-dystroglycan is an extracellular protein binding to alpha-laminin and to beta-dystroglycan; beta-dystroglycan is a transmembrane protein which binds alpha-dystroglycan and dystrophin.
	GO:0016010	dystrophin-associated glycoprotein complex	A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
	GO:0030175	filopodium	Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.
	GO:0005925	focal adhesion	Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0030027	lamellipodium	A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0045121	membrane raft	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
	GO:0033268	node of Ranvier	An axon part that is a gap in the myelin where voltage-gated sodium channels cluster and saltatory conduction is executed.
	GO:0005654	nucleoplasm	That part of the nuclear content other than the chromosomes or the nucleolus.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0045211	postsynaptic membrane	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.
	GO:0042383	sarcolemma	The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.
	GO:0045202	synapse	The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.

Description

Compounds

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Ligands, Modified Residues, Ions (0, 0)

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Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 1)

PROSITE Motifs (2, 2)

Exons (9, 9)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 3)

CATH Domains (2, 3)

Pfam Domains (0, 0)

Gene Ontology (106, 125)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File