1DXX - JenaLib

Asymmetric Unit (8, 32)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.2b	ENST00000357033	2b	ENSE00001899141	X:33229636-33229399	238	DMD_HUMAN	1-11	11	4	A:9-11 B:9-11 C:9-11 D:9-11	3 3 3 3
1.7b	ENST00000357033	7b	ENSE00001435901	X:33038317-33038256	62	DMD_HUMAN	11-31	21	4	A:11-31 B:11-31 C:11-31 D:11-31	21 21 21 21
1.9a	ENST00000357033	9a	ENSE00001614720	X:32867937-32867845	93	DMD_HUMAN	32-62	31	4	A:32-62 B:32-62 C:32-62 D:32-62	31 31 31 31
1.10	ENST00000357033	10	ENSE00001640206	X:32862977-32862900	78	DMD_HUMAN	63-88	26	4	A:63-88 B:63-88 C:63-88 D:63-88	26 26 26 26
1.11	ENST00000357033	11	ENSE00001685282	X:32841504-32841412	93	DMD_HUMAN	89-119	31	4	A:89-119 B:89-119 C:89-119 D:89-119	31 31 31 31
1.12a	ENST00000357033	12a	ENSE00001789498	X:32834757-32834585	173	DMD_HUMAN	120-177	58	4	A:120-177 B:120-177 C:120-177 D:120-177	58 58 58 58
1.13	ENST00000357033	13	ENSE00001436342	X:32827728-32827610	119	DMD_HUMAN	177-217	41	4	A:177-217 B:177-217 C:177-217 D:177-217	41 41 41 41
1.14	ENST00000357033	14	ENSE00001436506	X:32717410-32717229	182	DMD_HUMAN	217-277	61	4	A:217-246 B:217-246 C:217-246 D:217-246	30 30 30 30
1.15	ENST00000357033	15	ENSE00001434995	X:32716115-32715987	129	DMD_HUMAN	278-320	43	0	-	-
1.16	ENST00000357033	16	ENSE00001435581	X:32663269-32663081	189	DMD_HUMAN	321-383	63	0	-	-
1.17	ENST00000357033	17	ENSE00001435687	X:32662430-32662249	182	DMD_HUMAN	384-444	61	0	-	-
1.18	ENST00000357033	18	ENSE00001435796	X:32632570-32632420	151	DMD_HUMAN	444-494	51	0	-	-
1.19	ENST00000357033	19	ENSE00001436736	X:32613993-32613874	120	DMD_HUMAN	495-534	40	0	-	-
1.20	ENST00000357033	20	ENSE00001034188	X:32591963-32591862	102	DMD_HUMAN	535-568	34	0	-	-
1.21c	ENST00000357033	21c	ENSE00001479014	X:32591754-32591647	108	DMD_HUMAN	569-604	36	0	-	-
1.22	ENST00000357033	22	ENSE00001434823	X:32583998-32583819	180	DMD_HUMAN	605-664	60	0	-	-
1.23	ENST00000357033	23	ENSE00001435605	X:32563451-32563276	176	DMD_HUMAN	665-723	59	0	-	-
1.24a	ENST00000357033	24a	ENSE00001436267	X:32536248-32536125	124	DMD_HUMAN	723-764	42	0	-	-
1.25	ENST00000357033	25	ENSE00001436655	X:32519959-32519872	88	DMD_HUMAN	765-794	30	0	-	-
1.26	ENST00000357033	26	ENSE00001436512	X:32509635-32509394	242	DMD_HUMAN	794-874	81	0	-	-
1.27	ENST00000357033	27	ENSE00001435151	X:32503216-32503036	181	DMD_HUMAN	875-935	61	0	-	-
1.28	ENST00000357033	28	ENSE00001435583	X:32490426-32490281	146	DMD_HUMAN	935-983	49	0	-	-
1.29	ENST00000357033	29	ENSE00001435180	X:32486827-32486615	213	DMD_HUMAN	984-1054	71	0	-	-
1.30	ENST00000357033	30	ENSE00001436271	X:32482816-32482703	114	DMD_HUMAN	1055-1092	38	0	-	-
1.31	ENST00000357033	31	ENSE00001435906	X:32481711-32481556	156	DMD_HUMAN	1093-1144	52	0	-	-
1.32	ENST00000357033	32	ENSE00001436731	X:32472949-32472779	171	DMD_HUMAN	1145-1201	57	0	-	-
1.33	ENST00000357033	33	ENSE00001436545	X:32466755-32466573	183	DMD_HUMAN	1202-1262	61	0	-	-
1.34	ENST00000357033	34	ENSE00001435146	X:32459431-32459297	135	DMD_HUMAN	1263-1307	45	0	-	-
1.35	ENST00000357033	35	ENSE00001434999	X:32456507-32456358	150	DMD_HUMAN	1308-1357	50	0	-	-
1.38	ENST00000357033	38	ENSE00001434585	X:32430030-32429869	162	DMD_HUMAN	1358-1411	54	0	-	-
1.39	ENST00000357033	39	ENSE00001435573	X:32408298-32408188	111	DMD_HUMAN	1412-1448	37	0	-	-
1.40	ENST00000357033	40	ENSE00001435218	X:32407791-32407618	174	DMD_HUMAN	1449-1506	58	0	-	-
1.41	ENST00000357033	41	ENSE00001436039	X:32404582-32404427	156	DMD_HUMAN	1507-1558	52	0	-	-
1.42	ENST00000357033	42	ENSE00001435954	X:32398797-32398627	171	DMD_HUMAN	1559-1615	57	0	-	-
1.43	ENST00000357033	43	ENSE00000978409	X:32383316-32383137	180	DMD_HUMAN	1616-1675	60	0	-	-
1.44b	ENST00000357033	44b	ENSE00001157370	X:32382827-32382699	129	DMD_HUMAN	1676-1718	43	0	-	-
1.45	ENST00000357033	45	ENSE00001434721	X:32381075-32380905	171	DMD_HUMAN	1719-1775	57	0	-	-
1.46a	ENST00000357033	46a	ENSE00001435398	X:32366645-32366523	123	DMD_HUMAN	1776-1816	41	0	-	-
1.47	ENST00000357033	47	ENSE00001436772	X:32364197-32364060	138	DMD_HUMAN	1817-1862	46	0	-	-
1.48	ENST00000357033	48	ENSE00001435120	X:32361403-32361251	153	DMD_HUMAN	1863-1913	51	0	-	-
1.50	ENST00000357033	50	ENSE00001435597	X:32360399-32360217	183	DMD_HUMAN	1914-1974	61	0	-	-
1.51	ENST00000357033	51	ENSE00001435825	X:32328393-32328199	195	DMD_HUMAN	1975-2039	65	0	-	-
1.52	ENST00000357033	52	ENSE00001434843	X:32305818-32305646	173	DMD_HUMAN	2040-2097	58	0	-	-
1.53	ENST00000357033	53	ENSE00001434686	X:32235180-32235033	148	DMD_HUMAN	2097-2146	50	0	-	-
1.55	ENST00000357033	55	ENSE00001657981	X:31986631-31986456	176	DMD_HUMAN	2147-2205	59	0	-	-
1.56b	ENST00000357033	56b	ENSE00001774237	X:31950344-31950197	148	DMD_HUMAN	2205-2254	50	0	-	-
1.57a	ENST00000357033	57a	ENSE00001617885	X:31947862-31947713	150	DMD_HUMAN	2255-2304	50	0	-	-
1.58	ENST00000357033	58	ENSE00001704105	X:31893490-31893305	186	DMD_HUMAN	2305-2366	62	0	-	-
1.59a	ENST00000357033	59a	ENSE00001754131	X:31854936-31854835	102	DMD_HUMAN	2367-2400	34	0	-	-
1.60	ENST00000357033	60	ENSE00001746471	X:31838200-31838092	109	DMD_HUMAN	2401-2437	37	0	-	-
1.61	ENST00000357033	61	ENSE00001616109	X:31792309-31792077	233	DMD_HUMAN	2437-2514	78	0	-	-
1.62b	ENST00000357033	62b	ENSE00001213215	X:31747865-31747748	118	DMD_HUMAN	2515-2554	40	0	-	-
1.63	ENST00000357033	63	ENSE00001258577	X:31697703-31697492	212	DMD_HUMAN	2554-2624	71	0	-	-
1.64	ENST00000357033	64	ENSE00001213199	X:31676261-31676107	155	DMD_HUMAN	2625-2676	52	0	-	-
1.65	ENST00000357033	65	ENSE00001258641	X:31645979-31645790	190	DMD_HUMAN	2676-2739	64	0	-	-
1.67	ENST00000357033	67	ENSE00001259225	X:31525570-31525398	173	DMD_HUMAN	2740-2797	58	0	-	-
1.68	ENST00000357033	68	ENSE00001259203	X:31515061-31514905	157	DMD_HUMAN	2797-2849	53	0	-	-
1.69	ENST00000357033	69	ENSE00001259198	X:31497220-31497100	121	DMD_HUMAN	2850-2890	41	0	-	-
1.70b	ENST00000357033	70b	ENSE00001259193	X:31496491-31496223	269	DMD_HUMAN	2890-2979	90	0	-	-
1.71	ENST00000357033	71	ENSE00001259171	X:31462744-31462598	147	DMD_HUMAN	2980-3028	49	0	-	-
1.73	ENST00000357033	73	ENSE00001259181	X:31366751-31366673	79	DMD_HUMAN	3029-3055	27	0	-	-
1.74	ENST00000357033	74	ENSE00001213363	X:31341775-31341715	61	DMD_HUMAN	3055-3075	21	0	-	-
1.76	ENST00000357033	76	ENSE00001733920	X:31279133-31279072	62	DMD_HUMAN	3075-3096	22	0	-	-
1.77	ENST00000357033	77	ENSE00001674239	X:31241238-31241164	75	DMD_HUMAN	3096-3121	26	0	-	-
1.78b	ENST00000357033	78b	ENSE00001158950	X:31227816-31227615	202	DMD_HUMAN	3121-3188	68	0	-	-
1.79a	ENST00000357033	79a	ENSE00001158943	X:31224784-31224699	86	DMD_HUMAN	3188-3217	30	0	-	-
1.80	ENST00000357033	80	ENSE00001158937	X:31222235-31222078	158	DMD_HUMAN	3217-3269	53	0	-	-
1.81b	ENST00000357033	81b	ENSE00001034045	X:31201021-31200855	167	DMD_HUMAN	3270-3325	56	0	-	-
1.82	ENST00000357033	82	ENSE00001158926	X:31198598-31198487	112	DMD_HUMAN	3325-3362	38	0	-	-
1.83a	ENST00000357033	83a	ENSE00001034039	X:31196922-31196786	137	DMD_HUMAN	3363-3408	46	0	-	-
1.84	ENST00000357033	84	ENSE00001158912	X:31196087-31196049	39	DMD_HUMAN	3408-3421	14	0	-	-
1.85	ENST00000357033	85	ENSE00001158905	X:31191721-31191656	66	DMD_HUMAN	3421-3443	23	0	-	-
1.86	ENST00000357033	86	ENSE00001158901	X:31190530-31190465	66	DMD_HUMAN	3443-3465	23	0	-	-
1.87b	ENST00000357033	87b	ENSE00001158895	X:31187718-31187560	159	DMD_HUMAN	3465-3518	54	0	-	-
1.88	ENST00000357033	88	ENSE00001158887	X:31165635-31165392	244	DMD_HUMAN	3518-3599	82	0	-	-
1.89	ENST00000357033	89	ENSE00001034085	X:31164531-31164408	124	DMD_HUMAN	3600-3641	42	0	-	-
1.90	ENST00000357033	90	ENSE00001158874	X:31152311-31152219	93	DMD_HUMAN	3641-3672	32	0	-	-
1.91b	ENST00000357033	91b	ENSE00001436107	X:31144790-31144759	32	DMD_HUMAN	3672-3682	11	0	-	-
1.92e	ENST00000357033	92e	ENSE00001788214	X:31140047-31137345	2703	DMD_HUMAN	3683-3685	3	0	-	-

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:238
 aligned with DMD_HUMAN | P11532 from UniProtKB/Swiss-Prot  Length:3685

    Alignment length:238
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238        
            DMD_HUMAN     9 DCYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQVLPQQVSIE 246
               SCOP domains d1dxxa1 A:9-119 Dystrophin                                                                                     d1dxxa2 A:120-246 Dystrophin                                                                                                    SCOP domains
               CATH domains 1dxxA01 A:9-121 Actin-binding Protein, T-fimbrin; domain 1                                                       1dxxA02 A:122-246 Actin-binding Protein, T-fimbrin; domain 1                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.......hhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhhhhh..........hhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.......hhhhhh....hhhhhhhhhhhhhh.....eee. Sec.struct. author
                 SAPs(SNPs) ---------N-----------------------------------R---------------------------------------------------------------R--------------P-------------------------------V--D--P-----------------------------------------------------------N--------------- SAPs(SNPs)
                PROSITE (1) ------CH  PDB: A:15-119 UniProt: 15-119                                                                        --------------CH  PDB: A:134-237 UniProt: 134-237                                                                     --------- PROSITE (1)
                PROSITE (2) --------ACTININ_1 ----------------------------------------------------------------ACTININ_2  PDB: A:91-115 ----------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.2--------------------Exon 1.9a  PDB: A:32-62        Exon 1.10  PDB: A:63-88   Exon 1.11  PDB: A:89-119       Exon 1.12a  PDB: A:120-177 UniProt: 120-177               ---------------------------------------Exon 1.14  PDB: A:217-246      Transcript 1 (1)
           Transcript 1 (2) --Exon 1.7b            -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.13  PDB: A:177-217                ----------------------------- Transcript 1 (2)
                 1dxx A   9 DSYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQVLPQQVSIE 246
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238

Chain B from PDB  Type:PROTEIN  Length:238
 aligned with DMD_HUMAN | P11532 from UniProtKB/Swiss-Prot  Length:3685

    Alignment length:238
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238        
            DMD_HUMAN     9 DCYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQVLPQQVSIE 246
               SCOP domains d1dxxb1 B:9-119 Dystrophin                                                                                     d1dxxb2 B:120-246 Dystrophin                                                                                                    SCOP domains
               CATH domains 1dxxB01 B:9-121 Actin-binding Protein, T-fimbrin; domain 1                                                       1dxxB02 B:122-246 Actin-binding Protein, T-fimbrin; domain 1                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.......hhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhhhhh..........hhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.......hhhhhh....hhhhhhhhhhhhhh.....eee. Sec.struct. author
                 SAPs(SNPs) ---------N-----------------------------------R---------------------------------------------------------------R--------------P-------------------------------V--D--P-----------------------------------------------------------N--------------- SAPs(SNPs)
                PROSITE (1) ------CH  PDB: B:15-119 UniProt: 15-119                                                                        --------------CH  PDB: B:134-237 UniProt: 134-237                                                                     --------- PROSITE (1)
                PROSITE (2) --------ACTININ_1 ----------------------------------------------------------------ACTININ_2  PDB: B:91-115 ----------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.2--------------------Exon 1.9a  PDB: B:32-62        Exon 1.10  PDB: B:63-88   Exon 1.11  PDB: B:89-119       Exon 1.12a  PDB: B:120-177 UniProt: 120-177               ---------------------------------------Exon 1.14  PDB: B:217-246      Transcript 1 (1)
           Transcript 1 (2) --Exon 1.7b            -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.13  PDB: B:177-217                ----------------------------- Transcript 1 (2)
                 1dxx B   9 DSYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQVLPQQVSIE 246
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238

Chain C from PDB  Type:PROTEIN  Length:238
 aligned with DMD_HUMAN | P11532 from UniProtKB/Swiss-Prot  Length:3685

    Alignment length:238
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238        
            DMD_HUMAN     9 DCYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQVLPQQVSIE 246
               SCOP domains d1dxxc1 C:9-119 Dystrophin                                                                                     d1dxxc2 C:120-246 Dystrophin                                                                                                    SCOP domains
               CATH domains 1dxxC01 C:9-121 Actin-binding Protein, T-fimbrin; domain 1                                                       1dxxC02 C:122-246 Actin-binding Protein, T-fimbrin; domain 1                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.......hhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhhhhh..........hhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.......hhhhhh....hhhhhhhhhhhhhh.....eee. Sec.struct. author
                 SAPs(SNPs) ---------N-----------------------------------R---------------------------------------------------------------R--------------P-------------------------------V--D--P-----------------------------------------------------------N--------------- SAPs(SNPs)
                PROSITE (1) ------CH  PDB: C:15-119 UniProt: 15-119                                                                        --------------CH  PDB: C:134-237 UniProt: 134-237                                                                     --------- PROSITE (1)
                PROSITE (2) --------ACTININ_1 ----------------------------------------------------------------ACTININ_2  PDB: C:91-115 ----------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.2--------------------Exon 1.9a  PDB: C:32-62        Exon 1.10  PDB: C:63-88   Exon 1.11  PDB: C:89-119       Exon 1.12a  PDB: C:120-177 UniProt: 120-177               ---------------------------------------Exon 1.14  PDB: C:217-246      Transcript 1 (1)
           Transcript 1 (2) --Exon 1.7b            -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.13  PDB: C:177-217                ----------------------------- Transcript 1 (2)
                 1dxx C   9 DSYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQVLPQQVSIE 246
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238

Chain D from PDB  Type:PROTEIN  Length:238
 aligned with DMD_HUMAN | P11532 from UniProtKB/Swiss-Prot  Length:3685

    Alignment length:238
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238        
            DMD_HUMAN     9 DCYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQVLPQQVSIE 246
               SCOP domains d1dxxd1 D:9-119 Dystrophin                                                                                     d1dxxd2 D:120-246 Dystrophin                                                                                                    SCOP domains
               CATH domains 1dxxD01 D:9-121 Actin-binding Protein, T-fimbrin; domain 1                                                       1dxxD02 D:122-246 Actin-binding Protein, T-fimbrin; domain 1                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.......hhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhhhhh..........hhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.......hhhhhh....hhhhhhhhhhhhhh.....eee. Sec.struct. author
                 SAPs(SNPs) ---------N-----------------------------------R---------------------------------------------------------------R--------------P-------------------------------V--D--P-----------------------------------------------------------N--------------- SAPs(SNPs)
                PROSITE (1) ------CH  PDB: D:15-119 UniProt: 15-119                                                                        --------------CH  PDB: D:134-237 UniProt: 134-237                                                                     --------- PROSITE (1)
                PROSITE (2) --------ACTININ_1 ----------------------------------------------------------------ACTININ_2  PDB: D:91-115 ----------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.2--------------------Exon 1.9a  PDB: D:32-62        Exon 1.10  PDB: D:63-88   Exon 1.11  PDB: D:89-119       Exon 1.12a  PDB: D:120-177 UniProt: 120-177               ---------------------------------------Exon 1.14  PDB: D:217-246      Transcript 1 (1)
           Transcript 1 (2) --Exon 1.7b            -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.13  PDB: D:177-217                ----------------------------- Transcript 1 (2)
                 1dxx D   9 DSYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQVLPQQVSIE 246
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 8)

CATH Domains (1, 8)

Pfam Domains (0, 0)

Gene Ontology (58, 58)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (DMD_HUMAN | P11532)

molecular function
	GO:0003779	actin binding	Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
	GO:0002162	dystroglycan binding	Interacting selectively and non-covalently with dystroglycan. Dystroglycan is glycoprotein found in non-muscle tissues as well as in muscle tissues, often in association with dystrophin. The native dystroglycan cleaved into two non-covalently associated subunits, alpha (N-terminal) and beta (C-terminal).
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0017022	myosin binding	Interacting selectively and non-covalently with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments.
	GO:0050998	nitric-oxide synthase binding	Interacting selectively and non-covalently with the enzyme nitric-oxide synthase.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0005200	structural constituent of cytoskeleton	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.
	GO:0008307	structural constituent of muscle	The action of a molecule that contributes to the structural integrity of a muscle fiber.
	GO:0017166	vinculin binding	Interacting selectively and non-covalently with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0086001	cardiac muscle cell action potential	An action potential that occurs in a cardiac muscle cell.
	GO:0060048	cardiac muscle contraction	Muscle contraction of cardiac muscle tissue.
	GO:0043623	cellular protein complex assembly	The aggregation, arrangement and bonding together of a set of components to form a protein complex, occurring at the level of an individual cell.
	GO:0034613	cellular protein localization	Any process in which a protein is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell.
	GO:0044458	motile cilium assembly	The aggregation, arrangement and bonding together of a set of components to form a motile cilium.
	GO:0016203	muscle attachment	The developmental process in which a skeletal muscle attaches to its target (such as bone or body wall).
	GO:0046716	muscle cell cellular homeostasis	The cellular homeostatic process that preserves a muscle cell in a stable functional or structural state.
	GO:0048747	muscle fiber development	The process whose specific outcome is the progression of the muscle fiber over time, from its formation to the mature structure. In skeletal muscle, fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.
	GO:0030049	muscle filament sliding	The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated.
	GO:0007517	muscle organ development	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.
	GO:1902083	negative regulation of peptidyl-cysteine S-nitrosylation	Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-cysteine S-nitrosylation.
	GO:0033137	negative regulation of peptidyl-serine phosphorylation	Any process that stops, prevents, or reduces the frequency, rate or extent of the phosphorylation of peptidyl-serine.
	GO:0043043	peptide biosynthetic process	The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.
	GO:0045666	positive regulation of neuron differentiation	Any process that activates or increases the frequency, rate or extent of neuron differentiation.
	GO:0010976	positive regulation of neuron projection development	Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
	GO:2000651	positive regulation of sodium ion transmembrane transporter activity	Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transporter activity.
	GO:0010881	regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion	Any process that modulates the frequency, rate or extent of cardiac muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.
	GO:0090287	regulation of cellular response to growth factor stimulus	Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.
	GO:0002027	regulation of heart rate	Any process that modulates the frequency or rate of heart contraction.
	GO:0010880	regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum	Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.
	GO:0060314	regulation of ryanodine-sensitive calcium-release channel activity	Any process that modulates the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
	GO:0014819	regulation of skeletal muscle contraction	Any process that modulates the frequency, rate or extent of skeletal muscle contraction.
	GO:0014809	regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion	Any process that modulates the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.
	GO:1901385	regulation of voltage-gated calcium channel activity	Any process that modulates the frequency, rate or extent of voltage-gated calcium channel activity.
	GO:0035994	response to muscle stretch	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a myofibril being extended beyond its slack length.
cellular component
	GO:0030018	Z disc	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.
	GO:0015629	actin cytoskeleton	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
	GO:0030054	cell junction	A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
	GO:0009986	cell surface	The external part of the cell wall and/or plasma membrane.
	GO:0030055	cell-substrate junction	A cell junction that forms a connection between a cell and the extracellular matrix.
	GO:0043034	costamere	Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0016010	dystrophin-associated glycoprotein complex	A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase.
	GO:0030175	filopodium	Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.
	GO:0031527	filopodium membrane	The portion of the plasma membrane surrounding a filopodium.
	GO:0016328	lateral plasma membrane	The portion of the plasma membrane at the lateral side of the cell. In epithelial cells, lateral plasma membranes are on the sides of cells which lie at the interface of adjacent cells.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0045121	membrane raft	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
	GO:0044306	neuron projection terminus	The specialized, terminal region of a neuron projection such as an axon or a dendrite.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0045211	postsynaptic membrane	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.
	GO:0043234	protein complex	A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.
	GO:0042383	sarcolemma	The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.
	GO:0045202	synapse	The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
	GO:0016013	syntrophin complex	A protein complex that includes alpha-, beta1-, beta2-syntrophins and syntrophin-like proteins; the syntrophin complex binds to the second half of the carboxy-terminal domain of dystrophin; also associates with neuronal nitric oxide synthase.

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (8, 32)

PROSITE Motifs (3, 16)

Exons (8, 32)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 8)

CATH Domains (1, 8)

Pfam Domains (0, 0)

Gene Ontology (58, 58)

Visualization

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Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File