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1ZYR
Asym. Unit
Info
Asym.Unit (1.1 MB)
Biol.Unit 1 (551 KB)
Biol.Unit 2 (553 KB)
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(1)
Title
:
STRUCTURE OF THERMUS THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH THE ANTIBIOTIC STREPTOLYDIGIN
Authors
:
S. Tuske, S. G. Sarafianos, X. Wang, B. Hudson, E. Sineva, J. Mukhopadhyay, J. J. Birktoft, O. Leroy, S. Ismail, A. D. Clark, C. Dharia, A. Napoli, O. Laptenko, J. Lee, S. Borukhov, R. H. Ebright, E. Arnold
Date
:
10 Jun 05 (Deposition) - 13 Sep 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,K,L,M,N,O,P
Biol. Unit 1: A,B,C,D,E,F (1x)
Biol. Unit 2: K,L,M,N,O,P (1x)
Keywords
:
Rna Polymerase; Streptolydigin; Transcription; Holoenzyme, Transcription, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Tuske, S. G. Sarafianos, X. Wang, B. Hudson, E. Sineva, J. Mukhopadhyay, J. J. Birktoft, O. Leroy, S. Ismail, A. D. Clark, C. Dharia, A. Napoli, O. Laptenko, J. Lee, S. Borukhov, R. H. Ebright, E. Arnold
Inhibition Of Bacterial Rna Polymerase By Streptolydigin: Stabilization Of A Straight-Bridge-Helix Active-Center Conformation.
Cell(Cambridge, Mass. ) V. 122 541 2005
(for further references see the
PDB file header
)
[
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
1b: MAGNESIUM ION (MGb)
2a: STREPTOLYDIGIN (STDa)
2b: STREPTOLYDIGIN (STDb)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MG
2
Ligand/Ion
MAGNESIUM ION
2
STD
2
Ligand/Ion
STREPTOLYDIGIN
3
ZN
4
Ligand/Ion
ZINC ION
[
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]
Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG C:422 , ALA C:423 , PHE C:425 , ARG C:428 , ALA D:1082 , ALA D:1085 , LEU D:1086 , ASP D:1090 , PRO D:1257
BINDING SITE FOR RESIDUE STD D 1525
2
AC2
SOFTWARE
ARG M:422 , ALA M:423 , GLY M:424 , PHE M:425 , ARG M:428 , ALA N:1082 , ALA N:1085 , LEU N:1086 , ASP N:1090
BINDING SITE FOR RESIDUE STD M 1120
3
AC3
SOFTWARE
CYS D:58 , CYS D:60 , CYS D:73 , CYS D:76
BINDING SITE FOR RESIDUE ZN D 9001
4
AC4
SOFTWARE
CYS D:1112 , CYS D:1194 , GLN D:1195 , THR D:1196 , CYS D:1201 , CYS D:1204
BINDING SITE FOR RESIDUE ZN D 9002
5
AC5
SOFTWARE
CYS N:58 , CYS N:60 , CYS N:73 , CYS N:76
BINDING SITE FOR RESIDUE ZN N 9003
6
AC6
SOFTWARE
CYS N:1112 , CYS N:1194 , CYS N:1201 , CYS N:1204
BINDING SITE FOR RESIDUE ZN N 9004
7
AC7
SOFTWARE
ASP D:739 , ASP D:741 , ASP D:743
BINDING SITE FOR RESIDUE MG D 9901
8
AC8
SOFTWARE
ASP N:739 , ASP N:741 , ASP N:743
BINDING SITE FOR RESIDUE MG N 9902
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: RNA_POL_BETA (C:836-848,M:836-848)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RNA_POL_BETA
PS01166
RNA polymerases beta chain signature.
RPOB_THET8
836-848
2
C:836-848
M:836-848
[
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Exons
(0, 0)
Info
All Exons
View:
Select:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(7, 20)
Info
All SCOP Domains
1a: SCOP_d1zyrf1 (F:258-318)
1b: SCOP_d1zyrf2 (F:319-423)
1c: SCOP_d1zyrp1 (P:258-318)
1d: SCOP_d1zyrp2 (P:319-423)
2a: SCOP_d1zyre_ (E:)
2b: SCOP_d1zyro_ (O:)
3a: SCOP_d1zyrf3 (F:74-257)
3b: SCOP_d1zyrp3 (P:74-257)
4a: SCOP_d1zyra1 (A:1-49,A:173-229)
4b: SCOP_d1zyrb1 (B:1-49,B:173-229)
4c: SCOP_d1zyrk1 (K:1-49,K:173-229)
4d: SCOP_d1zyrl1 (L:1-49,L:173-229)
5a: SCOP_d1zyra2 (A:50-172)
5b: SCOP_d1zyrb2 (B:50-172)
5c: SCOP_d1zyrk2 (K:50-172)
5d: SCOP_d1zyrl2 (L:50-172)
6a: SCOP_d1zyrc_ (C:)
6b: SCOP_d1zyrm_ (M:)
7a: SCOP_d1zyrd_ (D:)
7b: SCOP_d1zyrn_ (N:)
View:
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Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Sigma3 and sigma4 domains of RNA polymerase sigma factors
(41)
Family
:
automated matches
(4)
Protein domain
:
automated matches
(4)
Thermus thermophilus [TaxId: 274]
(1)
1a
d1zyrf1
F:258-318
1b
d1zyrf2
F:319-423
1c
d1zyrp1
P:258-318
1d
d1zyrp2
P:319-423
Fold
:
RPB6/omega subunit-like
(56)
Superfamily
:
RPB6/omega subunit-like
(56)
Family
:
RNA polymerase omega subunit
(19)
Protein domain
:
RNA polymerase omega subunit
(19)
Thermus thermophilus [TaxId: 274]
(10)
2a
d1zyre_
E:
2b
d1zyro_
O:
Fold
:
Sigma2 domain of RNA polymerase sigma factors
(19)
Superfamily
:
Sigma2 domain of RNA polymerase sigma factors
(19)
Family
:
Sigma2 domain of RNA polymerase sigma factors
(17)
Protein domain
:
automated matches
(2)
Thermus thermophilus [TaxId: 274]
(1)
3a
d1zyrf3
F:74-257
3b
d1zyrp3
P:74-257
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
DCoH-like
(107)
Superfamily
:
RBP11-like subunits of RNA polymerase
(76)
Family
:
RNA polymerase alpha subunit dimerisation domain
(43)
Protein domain
:
RNA polymerase alpha
(18)
Thermus thermophilus [TaxId: 274]
(13)
4a
d1zyra1
A:1-49,A:173-229
4b
d1zyrb1
B:1-49,B:173-229
4c
d1zyrk1
K:1-49,K:173-229
4d
d1zyrl1
L:1-49,L:173-229
Fold
:
Insert subdomain of RNA polymerase alpha subunit
(43)
Superfamily
:
Insert subdomain of RNA polymerase alpha subunit
(43)
Family
:
Insert subdomain of RNA polymerase alpha subunit
(43)
Protein domain
:
RNA polymerase alpha subunit
(18)
Thermus thermophilus [TaxId: 274]
(13)
5a
d1zyra2
A:50-172
5b
d1zyrb2
B:50-172
5c
d1zyrk2
K:50-172
5d
d1zyrl2
L:50-172
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
beta and beta-prime subunits of DNA dependent RNA-polymerase
(103)
Superfamily
:
beta and beta-prime subunits of DNA dependent RNA-polymerase
(103)
Family
:
RNA-polymerase beta
(54)
Protein domain
:
automated matches
(17)
Thermus thermophilus [TaxId: 274]
(7)
6a
d1zyrc_
C:
6b
d1zyrm_
M:
Family
:
RNA-polymerase beta-prime
(49)
Protein domain
:
automated matches
(8)
Thermus thermophilus [TaxId: 274]
(1)
7a
d1zyrd_
D:
7b
d1zyrn_
N:
[
close SCOP info
]
CATH Domains
(10, 24)
Info
all CATH domains
01a: CATH_1zyrA01 (A:1-49,A:172-225)
01b: CATH_1zyrB01 (B:1-49,B:172-225)
01c: CATH_1zyrK01 (K:1-49,K:172-225)
01d: CATH_1zyrL01 (L:1-49,L:172-225)
02a: CATH_1zyrC03 (C:144-323)
02b: CATH_1zyrM03 (M:144-323)
03a: CATH_1zyrE00 (E:2-96)
03b: CATH_1zyrO00 (O:2-96)
04a: CATH_1zyrC02 (C:9-143,C:324-470,C:536-592)
04b: CATH_1zyrM02 (M:9-143,M:324-470,M:536-592)
05a: CATH_1zyrF02 (F:260-313)
05b: CATH_1zyrP02 (P:260-313)
06a: CATH_1zyrC01 (C:2-8,C:668-698,C:832-1004)
06b: CATH_1zyrM01 (M:2-8,M:668-698,M:832-1004)
07a: CATH_1zyrC05 (C:593-667)
07b: CATH_1zyrM05 (M:593-667)
08a: CATH_1zyrC06 (C:699-831)
08b: CATH_1zyrM06 (M:699-831)
09a: CATH_1zyrA02 (A:50-171)
09b: CATH_1zyrB02 (B:50-171)
09c: CATH_1zyrK02 (K:50-171)
09d: CATH_1zyrL02 (L:50-171)
10a: CATH_1zyrC04 (C:471-535)
10b: CATH_1zyrM04 (M:471-535)
View:
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Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Gyrase A; domain 2
(166)
Homologous Superfamily
:
[code=3.30.1360.10, no name defined]
(72)
Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274.
(9)
01a
1zyrA01
A:1-49,A:172-225
01b
1zyrB01
B:1-49,B:172-225
01c
1zyrK01
K:1-49,K:172-225
01d
1zyrL01
L:1-49,L:172-225
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3
(48)
Homologous Superfamily
:
[code=3.90.1110.10, no name defined]
(48)
Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274.
(9)
02a
1zyrC03
C:144-323
02b
1zyrM03
M:144-323
Topology
:
Eukaryotic RPB6 RNA polymerase subunit
(77)
Homologous Superfamily
:
[code=3.90.940.10, no name defined]
(71)
Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274.
(9)
03a
1zyrE00
E:2-96
03b
1zyrO00
O:2-96
Topology
:
Rna Polymerase Beta Subunit; Chain: C,domain 2
(18)
Homologous Superfamily
:
[code=3.90.1100.10, no name defined]
(18)
Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274.
(9)
04a
1zyrC02
C:9-143,C:324-470,C:536-592
04b
1zyrM02
M:9-143,M:324-470,M:536-592
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
'winged helix' repressor DNA binding domain
(507)
Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274.
(9)
05a
1zyrF02
F:260-313
05b
1zyrP02
P:260-313
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6
(18)
Homologous Superfamily
:
[code=2.40.270.10, no name defined]
(18)
Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274.
(9)
06a
1zyrC01
C:2-8,C:668-698,C:832-1004
06b
1zyrM01
M:2-8,M:668-698,M:832-1004
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
[code=2.40.50.100, no name defined]
(113)
Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274.
(9)
07a
1zyrC05
C:593-667
07b
1zyrM05
M:593-667
Homologous Superfamily
:
[code=2.40.50.150, no name defined]
(48)
Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274.
(9)
08a
1zyrC06
C:699-831
08b
1zyrM06
M:699-831
Architecture
:
Beta Complex
(381)
Topology
:
RNA Polymerase Alpha Subunit; Chain A, domain 2
(118)
Homologous Superfamily
:
RNA Polymerase Alpha Subunit; Chain A, domain 2
(71)
Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274.
(9)
09a
1zyrA02
A:50-171
09b
1zyrB02
B:50-171
09c
1zyrK02
K:50-171
09d
1zyrL02
L:50-171
Architecture
:
Roll
(1513)
Topology
:
Rna Polymerase Beta Subunit; Chain: C, domain 4
(18)
Homologous Superfamily
:
[code=2.30.150.10, no name defined]
(18)
Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274. Thermus thermophilus. Organism_taxid: 274.
(9)
10a
1zyrC04
C:471-535
10b
1zyrM04
M:471-535
[
close CATH info
]
Pfam Domains
(18, 42)
Info
all PFAM domains
01a: PFAM_Sigma70_r2_1zyrP01 (P:187-257)
01b: PFAM_Sigma70_r2_1zyrP02 (P:187-257)
02a: PFAM_Sigma70_r3_1zyrP03 (P:266-345)
02b: PFAM_Sigma70_r3_1zyrP04 (P:266-345)
03a: PFAM_Sigma70_r4_1zyrP05 (P:357-410)
03b: PFAM_Sigma70_r4_1zyrP06 (P:357-410)
04a: PFAM_RNA_pol_Rpb2_6_1zyrM01 (M:541-1026)
04b: PFAM_RNA_pol_Rpb2_6_1zyrM02 (M:541-1026)
05a: PFAM_RNA_pol_L_1zyrL01 (L:25-223)
05b: PFAM_RNA_pol_L_1zyrL02 (L:25-223)
05c: PFAM_RNA_pol_L_1zyrL03 (L:25-223)
05d: PFAM_RNA_pol_L_1zyrL04 (L:25-223)
06a: PFAM_RNA_pol_A_bac_1zyrL05 (L:52-180)
06b: PFAM_RNA_pol_A_bac_1zyrL06 (L:52-180)
06c: PFAM_RNA_pol_A_bac_1zyrL07 (L:52-180)
06d: PFAM_RNA_pol_A_bac_1zyrL08 (L:52-180)
07a: PFAM_RNA_pol_Rpb1_1_1zyrN01 (N:417-618)
07b: PFAM_RNA_pol_Rpb1_1_1zyrN02 (N:417-618)
07c: PFAM_RNA_pol_Rpb1_1_1zyrN03 (N:417-618)
07d: PFAM_RNA_pol_Rpb1_1_1zyrN04 (N:417-618)
08a: PFAM_RNA_pol_Rpb1_2_1zyrN05 (N:620-765)
08b: PFAM_RNA_pol_Rpb1_2_1zyrN06 (N:620-765)
09a: PFAM_RNA_pol_Rpb1_3_1zyrN07 (N:768-954)
09b: PFAM_RNA_pol_Rpb1_3_1zyrN08 (N:768-954)
10a: PFAM_RNA_pol_Rpb1_4_1zyrN09 (N:983-1066)
10b: PFAM_RNA_pol_Rpb1_4_1zyrN10 (N:983-1066)
11a: PFAM_RNA_pol_Rpb1_5_1zyrN11 (N:1064-1437)
11b: PFAM_RNA_pol_Rpb1_5_1zyrN12 (N:1064-1437)
12a: PFAM_RNA_pol_Rpb2_1_1zyrM03 (M:17-389)
12b: PFAM_RNA_pol_Rpb2_1_1zyrM04 (M:17-389)
13a: PFAM_RNA_pol_Rpb2_2_1zyrM05 (M:142-334)
13b: PFAM_RNA_pol_Rpb2_2_1zyrM06 (M:142-334)
14a: PFAM_RNA_pol_Rpb2_3_1zyrM07 (M:393-462)
14b: PFAM_RNA_pol_Rpb2_3_1zyrM08 (M:393-462)
15a: PFAM_RNA_pol_Rpb2_45_1zyrM09 (M:471-535)
15b: PFAM_RNA_pol_Rpb2_45_1zyrM10 (M:471-535)
16a: PFAM_RNA_pol_Rpb2_7_1zyrM11 (M:1028-1104)
16b: PFAM_RNA_pol_Rpb2_7_1zyrM12 (M:1028-1104)
17a: PFAM_RNA_pol_Rpb6_1zyrO01 (O:7-57)
17b: PFAM_RNA_pol_Rpb6_1zyrO02 (O:7-57)
18a: PFAM_Sigma70_r1_2_1zyrP07 (P:78-114)
18b: PFAM_Sigma70_r1_2_1zyrP08 (P:78-114)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
HTH
(544)
Family
:
Sigma70_r2
(7)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(1)
01a
Sigma70_r2-1zyrP01
P:187-257
01b
Sigma70_r2-1zyrP02
P:187-257
Family
:
Sigma70_r3
(4)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(1)
02a
Sigma70_r3-1zyrP03
P:266-345
02b
Sigma70_r3-1zyrP04
P:266-345
Family
:
Sigma70_r4
(6)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(1)
03a
Sigma70_r4-1zyrP05
P:357-410
03b
Sigma70_r4-1zyrP06
P:357-410
Clan
:
LEF-8-like
(36)
Family
:
RNA_pol_Rpb2_6
(36)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
04a
RNA_pol_Rpb2_6-1zyrM01
M:541-1026
04b
RNA_pol_Rpb2_6-1zyrM02
M:541-1026
Clan
:
RBP11-like
(36)
Family
:
RNA_pol_L
(36)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(3)
05a
RNA_pol_L-1zyrL01
L:25-223
05b
RNA_pol_L-1zyrL02
L:25-223
05c
RNA_pol_L-1zyrL03
L:25-223
05d
RNA_pol_L-1zyrL04
L:25-223
Clan
:
no clan defined [family: RNA_pol_A_bac]
(36)
Family
:
RNA_pol_A_bac
(36)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(3)
06a
RNA_pol_A_bac-1zyrL05
L:52-180
06b
RNA_pol_A_bac-1zyrL06
L:52-180
06c
RNA_pol_A_bac-1zyrL07
L:52-180
06d
RNA_pol_A_bac-1zyrL08
L:52-180
Clan
:
no clan defined [family: RNA_pol_Rpb1_1]
(37)
Family
:
RNA_pol_Rpb1_1
(37)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
07a
RNA_pol_Rpb1_1-1zyrN01
N:417-618
07b
RNA_pol_Rpb1_1-1zyrN02
N:417-618
07c
RNA_pol_Rpb1_1-1zyrN03
N:417-618
07d
RNA_pol_Rpb1_1-1zyrN04
N:417-618
Clan
:
no clan defined [family: RNA_pol_Rpb1_2]
(36)
Family
:
RNA_pol_Rpb1_2
(36)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
08a
RNA_pol_Rpb1_2-1zyrN05
N:620-765
08b
RNA_pol_Rpb1_2-1zyrN06
N:620-765
Clan
:
no clan defined [family: RNA_pol_Rpb1_3]
(36)
Family
:
RNA_pol_Rpb1_3
(36)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
09a
RNA_pol_Rpb1_3-1zyrN07
N:768-954
09b
RNA_pol_Rpb1_3-1zyrN08
N:768-954
Clan
:
no clan defined [family: RNA_pol_Rpb1_4]
(36)
Family
:
RNA_pol_Rpb1_4
(36)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
10a
RNA_pol_Rpb1_4-1zyrN09
N:983-1066
10b
RNA_pol_Rpb1_4-1zyrN10
N:983-1066
Clan
:
no clan defined [family: RNA_pol_Rpb1_5]
(36)
Family
:
RNA_pol_Rpb1_5
(36)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
11a
RNA_pol_Rpb1_5-1zyrN11
N:1064-1437
11b
RNA_pol_Rpb1_5-1zyrN12
N:1064-1437
Clan
:
no clan defined [family: RNA_pol_Rpb2_1]
(37)
Family
:
RNA_pol_Rpb2_1
(37)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
12a
RNA_pol_Rpb2_1-1zyrM03
M:17-389
12b
RNA_pol_Rpb2_1-1zyrM04
M:17-389
Clan
:
no clan defined [family: RNA_pol_Rpb2_2]
(36)
Family
:
RNA_pol_Rpb2_2
(36)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
13a
RNA_pol_Rpb2_2-1zyrM05
M:142-334
13b
RNA_pol_Rpb2_2-1zyrM06
M:142-334
Clan
:
no clan defined [family: RNA_pol_Rpb2_3]
(35)
Family
:
RNA_pol_Rpb2_3
(35)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
14a
RNA_pol_Rpb2_3-1zyrM07
M:393-462
14b
RNA_pol_Rpb2_3-1zyrM08
M:393-462
Clan
:
no clan defined [family: RNA_pol_Rpb2_45]
(8)
Family
:
RNA_pol_Rpb2_45
(8)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
15a
RNA_pol_Rpb2_45-1zyrM09
M:471-535
15b
RNA_pol_Rpb2_45-1zyrM10
M:471-535
Clan
:
no clan defined [family: RNA_pol_Rpb2_7]
(36)
Family
:
RNA_pol_Rpb2_7
(36)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
16a
RNA_pol_Rpb2_7-1zyrM11
M:1028-1104
16b
RNA_pol_Rpb2_7-1zyrM12
M:1028-1104
Clan
:
no clan defined [family: RNA_pol_Rpb6]
(37)
Family
:
RNA_pol_Rpb6
(37)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(5)
17a
RNA_pol_Rpb6-1zyrO01
O:7-57
17b
RNA_pol_Rpb6-1zyrO02
O:7-57
Clan
:
no clan defined [family: Sigma70_r1_2]
(2)
Family
:
Sigma70_r1_2
(2)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(1)
18a
Sigma70_r1_2-1zyrP07
P:78-114
18b
Sigma70_r1_2-1zyrP08
P:78-114
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