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(-) Description

Title :  CRYSTAL STRUCTURE OF UBIG
 
Authors :  Y. Zhu, M. Teng, X. Li
Date :  24 Apr 13  (Deposition) - 30 Apr 14  (Release) - 30 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.09
Chains :  Asym./Biol. Unit :  A
Keywords :  Rossmann Fold, O-Methylation, Ubiquinone Biosynthesis, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Yuwei Zhu, Maikun Teng, Xu Li
Crystal Structure Of Ubig
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - 3-DEMETHYLUBIQUINONE-9 3-METHYLTRANSFERASE
    Chains: A
    EC Number: 2.1.1.64, 2.1.1.222
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: UBIG, PUFX, YFAB, B2232, JW2226
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 83333
    Strain: K12
    Synonym: 2-POLYPRENYL-6-HYDROXYPHENYL METHYLASE, 3,4-DIHYDROXY-5- HEXAPRENYLBENZOATE METHYLTRANSFERASE, DHHB METHYLTRANSFERASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4KDC)

(-) Sites  (0, 0)

(no "Site" information available for 4KDC)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4KDC)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4KDC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KDC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4KDC)

(-) Exons   (0, 0)

(no "Exon" information available for 4KDC)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:217
                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh.....eeeee....hhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhh...eee..hhhhhhhhh...eeeeee..hhhhh.hhhhhhhhhhhheeeeeeeeeeee.....hhhhhhhhhhhhhhh.....hhhhhhhhhhh...eeeeeeeeeee....eeeee.....eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4kdc A  16 EIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQN 239
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175      |192       202       212       222       232       
                                                                                                                                                                                                182|                                                 
                                                                                                                                                                                                 190
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4KDC)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4KDC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4KDC)

(-) Gene Ontology  (12, 12)

Asymmetric/Biological Unit(hide GO term definitions)

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  4kdc
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  UBIG_ECOLI | P17993
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  2.1.1.222
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  2.1.1.64
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        UBIG_ECOLI | P17993: 4kdr 5dpm

(-) Related Entries Specified in the PDB File

4kdr