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(-) Description

Title :  CRYSTAL STRUCTURE ANALYSIS OF THE COPPER-RECONSTITUTED P19 PROTEIN FROM CAMPYLOBACTER JEJUNI AT 1.65 A AT PH 10.0
 
Authors :  T. I. Doukov, A. C. K. Chan, M. Scofield, A. B. Ramin, S. A. L. Tom-Yew, M. E
Date :  01 Mar 10  (Deposition) - 21 Jul 10  (Release) - 25 Aug 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.65
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Copper Binding, Iron Transport, Iron Uptake, P19 Delition, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. C. Chan, T. I. Doukov, M. Scofield, S. A. Tom-Yew, A. B. Ramin, J. K. Mackichan, E. C. Gaynor, M. E. Murphy
Structure And Function Of P19, A High-Affinity Iron Transporter Of The Human Pathogen Campylobacter Jejuni.
J. Mol. Biol. V. 401 590 2010
PubMed-ID: 20600116  |  Reference-DOI: 10.1016/J.JMB.2010.06.038

(-) Compounds

Molecule 1 - P19 PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET19
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 22-179
    Gene: CJJ81176_1650, GENE CJ81176_1659
    Organism Scientific: CAMPYLOBACTER JEJUNI
    Organism Taxid: 354242
    Strain: 81-176

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric/Biological Unit (2, 4)
No.NameCountTypeFull Name
1CU2Ligand/IonCOPPER (II) ION
2SO42Ligand/IonSULFATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:42 , GLU A:44 , MET A:88 , HIS A:95 , HIS B:132BINDING SITE FOR RESIDUE CU A 200
2AC2SOFTWAREGLY A:7 , ASP A:8 , LYS A:10 , TYR A:150 , LYS A:151BINDING SITE FOR RESIDUE SO4 A 300
3AC3SOFTWAREHIS A:132 , HIS B:42 , GLU B:44 , MET B:88 , HIS B:95BINDING SITE FOR RESIDUE CU B 200
4AC4SOFTWAREGLY B:7 , ASP B:8 , LYS B:10 , ASP B:149 , TYR B:150 , LYS B:151BINDING SITE FOR RESIDUE SO4 B 300

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3LZO)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Glu A:28 -Pro A:29
2Glu B:28 -Pro B:29

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3LZO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3LZO)

(-) Exons   (0, 0)

(no "Exon" information available for 3LZO)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:159
 aligned with A0A0H3PA01_C | A0A0H3PA01 from UniProtKB/TrEMBL  Length:179

    Alignment length:159
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170         
         A0A0H3PA01_C    21 AGEVPIGDPKELNGMEIAAVYLQPIEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVGKWFEPFKVDYKFKYTGTPK 179
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeee..eeeeeeee....ee......hhhhh.eeeeeeeee.................eeeeeeee.....eeeeeeeeeee..eeeeeeee............eeeeeeeeeehhhhhh.eee.............eeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lzo A   1 GGEVPIGDPKELNGMEIAAVYLQPIEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVGKWFEPFKVDYKFKYTGTPK 159
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150         


Chain B from PDB  Type:PROTEIN  Length:159
 aligned with A0A0H3PA01_C | A0A0H3PA01 from UniProtKB/TrEMBL  Length:179

    Alignment length:159
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170         
         A0A0H3PA01_C    21 AGEVPIGDPKELNGMEIAAVYLQPIEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVGKWFEPFKVDYKFKYTGTPK 179
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeee..eeeeeeee....ee......hhhhh.eeeeeeeee.................eeeeeeee.....eeeee.eeeee..eeeeeeee............eeeeeeeeeehhhhhh.eee.............eeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lzo B   1 GGEVPIGDPKELNGMEIAAVYLQPIEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVGKWFEPFKVDYKFKYTGTPK 159
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3LZO)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3LZO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3LZO)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3LZO)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A0A0H3PA01_C | A0A0H3PA01: 3lzl 3lzn 3lzp 3lzq 3lzr 4nwn 5i0v 5i0w

(-) Related Entries Specified in the PDB File

2o6c STRUCTURE OF SELENOMETHIONYL RTP34 FROM TREPONEMA PALLIDUM
2o6d STRUCTURE OF NATIVE RTP34 FROM TREPONEMA PALLIDUM
2o6e STRUCTURE OF NATIVE RTP34 FROM TREPONEMA PALLIDUM FROM ZINC -SOAKED CRYSTALS
2o6f STRUCTURE OF METAL- FREE RTP34 FROM TREPONEMA PALLIDUM
3lzl CRYSTAL STRUCTURE ANALYSIS OF THE AS-ISOLATED P19 PROTEIN FROM CAMPYLOBACTER JEJUNI AT 1.45 A AT PH 9.0
3lzn CRYSTAL STRUCTURE ANALYSIS OF THE APO P19 PROTEIN FROM CAMPYLOBACTER JEJUNI AT 1.59 A AT PH 9
3lzp CRYSTAL STRUCTURE ANALYSIS OF THE 'AS-ISOLATED' P19 PROTEIN FROM CAMPYLOBACTER JEJUNI AT 1.65 A AT PH 9
3lzq CRYSTAL STRUCTURE ANALYSIS OF MANGANESE TREATED P19 PROTEIN FROM CAMPYLOBACTER JEJUNI AT 1.41 A AT PH 9
3lzr CRYSTAL STRUCTURE ANALYSIS OF MANGANESE TREATED P19 PROTEIN FROM CAMPYLOBACTER JEJUNI AT 2.73 A AT PH 9 AND MANGANESE PEAK WAVELENGTH (1.893 A)