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(-) Description

Title :  BACILLUS CEREUS ZN-DEPENDENT METALLO-BETA-LACTAMASE AT PH 7 - NEW REFINEMENT
 
Authors :  J. M. Gonzalez, I. G. Shabalin, J. E. Raczynska, M. Jaskolski, W. Minor, A. Wlodawer, M. M. Gonzalez, A. J. Vila
Date :  22 Jun 17  (Deposition) - 12 Jul 17  (Release) - 12 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.25
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  I. G. Shabalin, J. E. Raczynska, A. Wlodawer, W. Minor, M. Jaskolski
Re-Investigation Of Structural Data For Biomedically Important Enzymes - Metallo-Beta-Lactamases
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - METALLO-BETA-LACTAMASE TYPE 2
    ChainsA
    EC Number3.5.2.6
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET27B
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentRESIDUES 36-257
    GeneBLM
    Organism ScientificBACILLUS CEREUS
    Organism Taxid1396
    SynonymB2 METALLO-BETA-LACTAMASE,BETA-LACTAMASE II, CEPHALOSPORINASE,METALLO-BETA-LACTAMASE TYPE II,METALLOTHIOPROTEIN BETA-LACTAMASE II,PENICILLINASE,ZINC-REQUIRING BETA-LACTAMASE II

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION
2UNX1Ligand/IonUNKNOWN ATOM OR ION
3ZN2Ligand/IonZINC ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:116 , HIS A:118 , HIS A:179 , ZN A:302 , HOH A:452binding site for residue ZN A 301
2AC2SOFTWAREASP A:120 , CYS A:198 , HIS A:240 , ZN A:301 , HOH A:452binding site for residue ZN A 302
3AC3SOFTWARELYS A:103 , LYS A:169 , GLN A:190binding site for residue SO4 A 304

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5W8W)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5W8W)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5W8W)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5W8W)

(-) Exons   (0, 0)

(no "Exon" information available for 5W8W)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.....eeeeeee..eeeeeeee..eeeeeeeeee..eeeee....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhh.eee.hhhhhhhhhhh...........eeeeee..eeeeee...........eeee....eeeeehhh..............hhhhhhhhhhhhhhhh....eeee.......hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5w8w A  36 KTVIKNETGTISISQLNKNVWVHTELGSAVPSNGLVLNTSKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKERGIKAHSTALTAELAKKNGYEEPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYNILVGGCLVKSTSAKDLGNVADAYVNEWSTSIENVLKRYRNINAVVPGHGEVGDKGLLLHTLDLLK 257
                                    45        55       |69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249        
                                                      63|                                                                                                                                                                                             
                                                       68                                                                                                                                                                                             

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5W8W)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5W8W)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5W8W)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 5W8W)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BLA2_BACCE | P041901bc2 1bmc 1bvt 1dxk 1mqo 2bc2 2bfk 2bfl 2bfz 2bg2 2bg6 2bg7 2bg8 2bga 2m5c 2m5d 2nxa 2nyp 2nze 2nzf 2uyx 3bc2 3fcz 3i0v 3i11 3i13 3i14 3i15 3knr 3kns 4c09 4c1c 4c1h 4nq4 4nq5 4nq6 4nq7 4tyt 5fqa 5fqb 5jmx

(-) Related Entries Specified in the PDB File

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