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(-) Description

Title :  PT(II)-MEDIATED COPPER-DEPENDENT INTERACTIONS BETWEEN ATOX1 AND MNK1
 
Authors :  R. Caliandro, V. Mirabelli, R. Caliandro, A. Rosato, A. Lasorsa, A. Gal F. Arnesano, G. Natile
Date :  05 Sep 16  (Deposition) - 12 Oct 16  (Release) - 12 Oct 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.83
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Atox1-Mnk1, Pt-Binding, Heterodimer, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  V. Mirabelli, R. Caliandro, R. Caliandro, F. Arnesano, G. Natile
Pt(Ii)-Mediated Copper-Dependent Interactions Between Atox1 And Mnk1
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - COPPER TRANSPORT PROTEIN ATOX1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: ATOX1, HAH1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: METAL TRANSPORT PROTEIN ATX1
 
Molecule 2 - COPPER-TRANSPORTING ATPASE 1
    Chains: B
    EC Number: 3.6.3.54
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 7-77
    Gene: ATP7A, MC1, MNK
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: COPPER PUMP 1,MENKES DISEASE-ASSOCIATED PROTEIN

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric/Biological Unit (2, 4)
No.NameCountTypeFull Name
1CU2Ligand/IonCOPPER (II) ION
2PT2Ligand/IonPLATINUM (II) ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:12 , CYS B:15binding site for residue PT A 101
2AC2SOFTWARECYS A:12 , GLY A:14 , CYS A:15 , CU A:104 , CYS B:18binding site for residue CU A 102
3AC3SOFTWARELYS A:3 , CYS A:41 , HOH A:202 , HOH A:204binding site for residue PT A 103
4AC4SOFTWARECYS A:12 , CU A:102 , THR B:14 , CYS B:15 , CYS B:18binding site for residue CU A 104

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5T7L)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Glu A:68 -Ile A:69

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5T7L)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5T7L)

(-) Exons   (0, 0)

(no "Exon" information available for 5T7L)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:68
                                                                                                   
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...hhhhhhhhhhhhhhhh..eeeee....eeeee...hhhhhhhhhhhhh..eeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  5t7l A  2 PKHEFSVDMTCGGCAEAVSRVLNKLGGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLEI 69
                                    11        21        31        41        51        61        


Chain B from PDB  Type:PROTEIN  Length:75
                                                                                                          
               SCOP domains --------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee...hhhhhhhhhhhhh....eeeeeee....eeeeee.....hhhhhhhhhhh...eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------- Transcript
                  5t7l B  3 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNIEGR 77
                                    12        22        32        42        52        62        72
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5T7L)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5T7L)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5T7L)

(-) Gene Ontology  (79, 90)

Asymmetric/Biological Unit(hide GO term definitions)

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  5t7l
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  ATOX1_HUMAN | O00244
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  ATP7A_HUMAN | Q04656
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  3.6.3.54
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ATOX1_HUMAN | O00244: 1fe0 1fe4 1fee 1tl4 1tl5 2k1r 2lq9 3cjk 3iwl 3iwx 4qot 4ydx 4yea 5f0w
        ATP7A_HUMAN | Q04656: 1aw0 1kvi 1kvj 1q8l 1s6o 1s6u 1y3j 1y3k 1yjr 1yjt 1yju 1yjv 2aw0 2g9o 2ga7 2k1r 2kij 2kmv 2kmx 3cjk

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5T7L)