4YDX - JenaLib

Title :   CRYSTAL STRUCTURE OF CISPLATIN BOUND TO A HUMAN COPPER CHAPERONE (MONOMER) - NEW REFINEMENT

Authors :   I. G. Shabalin, A. K. Boal, Z. Dauter, M. Jaskolski, W. Minor, A. C. Rosen A. Wlodawer

Date :   23 Feb 15 (Deposition) - 04 Mar 15 (Release) - 16 Sep 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.60

Chains :   Asym./Biol. Unit : A

Keywords :   Re-Refinement Of 3Iwl, Cisplatin, Platinum, Metal-Binding, Metal Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   I. Shabalin, Z. Dauter, M. Jaskolski, W. Minor, A. Wlodawer
Crystallography And Chemistry Should Always Go Together: A Cautionary Tale Of Protein Complexes With Cisplatin And Carboplatin.
Acta Crystallogr. , Sect. D V. 71 1965 2015
PubMed-ID: 26327386 | Reference-DOI: 10.1107/S139900471500629X
(for further references see the PDB file header)

Compounds

Molecule 1 - COPPER TRANSPORT PROTEIN ATOX1
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET21B
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	ATOX1, HAH1
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	METAL TRANSPORT PROTEIN ATX1

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 3)

Sites (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	THR A:11 , CYS A:12 , CYS A:15 , TCE A:103	binding site for residue PT A 101
2	AC2	SOFTWARE	GLY A:27 , GLY A:28 , HIS A:46 , SER A:47 , THR A:50 , HOH A:219	binding site for residue SO4 A 102
3	AC3	SOFTWARE	CYS A:12 , GLY A:14 , CYS A:15 , LYS A:60 , PT A:101 , HOH A:210 , HOH A:264 , HOH A:266 , HOH A:269	binding site for residue TCE A 103

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:67
                                                                                                  
               SCOP domains ------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...hhhhhhhhhhhhhhhh..eeeee....eeeee...hhhhhhhhhhh....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  4ydx A  2 PKHEFSVDMTCGGCAEAVSRVLNKLGGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68
                                    11        21        31        41        51        61

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Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (16, 16)

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Description