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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN COPPER HOMEOSTATIC PROTEINS ATOX1
 
Authors :  W. Wei, F. Wang, J. Zhao
Date :  28 Nov 15  (Deposition) - 18 Jan 17  (Release) - 18 Jan 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Copper, Homeostatic, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. Wei, F. Wang, J. Zhao
Structure Of Tetrasilver Bound To Human Copper Homeostatic Proteins Atox1 At 1. 7 Angstroms Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - COPPER TRANSPORT PROTEIN ATOX1
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: ATOX1, HAH1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: METAL TRANSPORT PROTEIN ATX1

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 8)

Asymmetric Unit (1, 8)
No.NameCountTypeFull Name
1AG8Ligand/IonSILVER ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1AG-1Ligand/IonSILVER ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1AG-1Ligand/IonSILVER ION
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1AG-1Ligand/IonSILVER ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1AG-1Ligand/IonSILVER ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:14 , CYS A:15 , LYS A:60 , AG A:102 , HOH A:203 , THR B:11 , CYS B:12 , AG B:102binding site for residue AG A 101
2AC2SOFTWARETHR A:11 , CYS A:12 , CYS A:15 , AG A:101 , CYS B:12 , AG B:101 , AG B:102binding site for residue AG A 102
3AC3SOFTWARETHR A:11 , CYS A:12 , AG A:102 , GLY B:14 , CYS B:15 , LYS B:60 , AG B:102 , HOH B:202binding site for residue AG B 101
4AC4SOFTWARECYS A:12 , AG A:101 , AG A:102 , THR B:11 , CYS B:12 , CYS B:15 , AG B:101binding site for residue AG B 102
5AC5SOFTWAREGLY C:14 , CYS C:15 , AG C:102 , THR D:11 , CYS D:12 , AG D:102 , HOH D:202binding site for residue AG C 101
6AC6SOFTWARETHR C:11 , CYS C:12 , CYS C:15 , AG C:101 , CYS D:12 , AG D:101 , AG D:102binding site for residue AG C 102
7AC7SOFTWARETHR C:11 , CYS C:12 , AG C:102 , GLY D:14 , CYS D:15 , LYS D:60 , AG D:102 , HOH D:203binding site for residue AG D 101
8AC8SOFTWARECYS C:12 , AG C:101 , AG C:102 , THR D:11 , CYS D:12 , CYS D:15 , AG D:101binding site for residue AG D 102

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5F0W)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5F0W)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5F0W)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5F0W)

(-) Exons   (0, 0)

(no "Exon" information available for 5F0W)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:68
                                                                                                   
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhhhhhh..eeeee....eeeee...hhhhhhhhhhh....eeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  5f0w A  1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68
                                    10        20        30        40        50        60        


Chain B from PDB  Type:PROTEIN  Length:68
                                                                                                   
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhhhhhh..eeeee....eeeee...hhhhhhhhhhh....eeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  5f0w B  1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68
                                    10        20        30        40        50        60        


Chain C from PDB  Type:PROTEIN  Length:68
                                                                                                   
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhhhhhh..eeeee....eeeee...hhhhhhhhhhh....eeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  5f0w C  1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68
                                    10        20        30        40        50        60        


Chain D from PDB  Type:PROTEIN  Length:68
                                                                                                   
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhhhhhh..eeeee....eeeee...hhhhhhhhhhh....eeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  5f0w D  1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68
                                    10        20        30        40        50        60
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5F0W)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5F0W)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5F0W)

(-) Gene Ontology  (16, 16)

Asymmetric Unit(hide GO term definitions)

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  5f0w
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  ATOX1_HUMAN | O00244
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ATOX1_HUMAN | O00244: 1fe0 1fe4 1fee 1tl4 1tl5 2k1r 2lq9 3cjk 3iwl 3iwx 4qot 4ydx 4yea 5t7l

(-) Related Entries Specified in the PDB File

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