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(-) Description

Title :  NMR SOLUTION STRUCTURE OF HUMAN FNIII DOMAIN 2 OF NCAM
 
Authors :  U. Slapsak, G. Salzano, L. Amin, R. N. N. Abskharon, G. Ilc, B. Zupancic, J. Plavec, G. Giachin, G. Legname
Date :  22 Jul 16  (Deposition) - 14 Sep 16  (Release) - 26 Oct 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Fibronectin Type Iii Domain, Protein Interactions, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  U. Slapsak, G. Salzano, L. Amin, R. N. Abskharon, G. Ilc, B. Zupancic, I. Biljan, J. Plavec, G. Giachin, G. Legname
The N Terminus Of The Prion Protein Mediates Functional Interactions With The Neuronal Cell Adhesion Molecule (Ncam Fibronectin Domain.
J. Biol. Chem. V. 291 21857 2016
PubMed-ID: 27535221  |  Reference-DOI: 10.1074/JBC.M116.743435

(-) Compounds

Molecule 1 - NEURAL CELL ADHESION MOLECULE 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Cell: BL21 (DE3)
    Expression System Plasmid: PET11A
    Expression System Taxid: 562
    Expression System Vector Type: PLAZMID
    Gene: NCAM1, NCAM
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: DETAILS ABOUT THE SEQUENCE RESIDUE AT POSITION 595 IS METHIONINE AND WAS ADDED FOR THE BEGINNING OF TRANSLATION RESIDUES 692-697 ON C-TERMINAL REPRESENTS SIX HISTIDINE RESIDUES WHICH WERE USED AS HIS-TAG FOR PROTEIN PURIFICATION
    Synonym: NCAM-1

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5LKN)

(-) Sites  (0, 0)

(no "Site" information available for 5LKN)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5LKN)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:103
                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................eeeee..........eeeeeeeeee.....eeeeeee....eeeee.......eeeeeeeee.......eeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 5lkn A 595 MQPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTHHHHHH 697
                                   604       614       624       634       644       654       664       674       684       694
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5LKN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5LKN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5LKN)

(-) Gene Ontology  (22, 22)

NMR Structure(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NCAM1_HUMAN | P13591: 2e3v 2haz 2vkw 2vkx 3mtr 5aea

(-) Related Entries Specified in the PDB File

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