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(-) Description

Title :  RHODOBACTER SPHAEROIDES BC1 WITH FAMOXADONE
 
Authors :  D. Xia, L. Esser, F. Zhou, W. K. Tang, C. A. Yu
Date :  23 Jun 16  (Deposition) - 12 Oct 16  (Release) - 07 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.97
Chains :  Asym. Unit :  A,B,C,E,F,G,K,L,M,O,P,Q
Biol. Unit 1:  A,B,C,E,F,G  (1x)
Biol. Unit 2:  K,L,M,O,P,Q  (1x)
Keywords :  Mitochondrial Respiratory Chain Complex, Cytochrome Bc1, Inhibitors, Electron Transfer, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Esser, F. Zhou, Y. Zhou, Y. Xiao, W. K. Tang, C. A. Yu, Z. Qin, D. Xia
Hydrogen Bonding To The Substrate Is Not Required For Riesk Iron-Sulfur Protein Docking To The Quinol Oxidation Site Of Complex Iii.
J. Biol. Chem. V. 291 25019 2016
PubMed-ID: 27758861  |  Reference-DOI: 10.1074/JBC.M116.744391

(-) Compounds

Molecule 1 - CYTOCHROME B
    Chains: A, E, K, O
    Engineered: YES
    Expression System: RHODOBACTER SP.
    Expression System Taxid: 1062
    Gene: PETB, FBCB
    Organism Scientific: RHODOBACTER SPHAEROIDES
    Organism Taxid: 1063
 
Molecule 2 - CYTOCHROME C1
    Chains: B, F, L, P
    Engineered: YES
    Expression System: RHODOBACTER SP.
    Expression System Taxid: 1062
    Gene: PETC, FBCC
    Organism Scientific: RHODOBACTER SPHAEROIDES
    Organism Taxid: 1063
 
Molecule 3 - UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT
    Chains: C, G, M, Q
    EC Number: 1.10.2.2
    Engineered: YES
    Expression System: RHODOBACTER SP.
    Expression System Taxid: 1062
    Gene: PETA, FBCF
    Organism Scientific: RHODOBACTER SPHAEROIDES
    Organism Taxid: 1063
    Synonym: RIESKE IRON-SULFUR PROTEIN,RISP

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCEFGKLMOPQ
Biological Unit 1 (1x): ABCEFG      
Biological Unit 2 (1x):       KLMOPQ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (8, 38)

Asymmetric Unit (8, 38)
No.NameCountTypeFull Name
1ASC4Ligand/IonASCORBIC ACID
2BOG4Ligand/IonB-OCTYLGLUCOSIDE
3FES4Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4FMX4Ligand/IonFAMOXADONE
5HEC4Ligand/IonHEME C
6HEM8Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
7LOP4Ligand/Ion(1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE
8SR6Ligand/IonSTRONTIUM ION
Biological Unit 1 (7, 16)
No.NameCountTypeFull Name
1ASC2Ligand/IonASCORBIC ACID
2BOG2Ligand/IonB-OCTYLGLUCOSIDE
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4FMX2Ligand/IonFAMOXADONE
5HEC2Ligand/IonHEME C
6HEM4Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
7LOP2Ligand/Ion(1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE
8SR-1Ligand/IonSTRONTIUM ION
Biological Unit 2 (7, 16)
No.NameCountTypeFull Name
1ASC2Ligand/IonASCORBIC ACID
2BOG2Ligand/IonB-OCTYLGLUCOSIDE
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4FMX2Ligand/IonFAMOXADONE
5HEC2Ligand/IonHEME C
6HEM4Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
7LOP2Ligand/Ion(1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE
8SR-1Ligand/IonSTRONTIUM ION

(-) Sites  (39, 39)

Asymmetric Unit (39, 39)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELEU A:55 , GLN A:58 , GLY A:62 , ILE A:63 , LEU A:65 , ALA A:66 , ARG A:94 , HIS A:97 , ALA A:98 , THR A:142 , GLY A:146 , LEU A:149 , PRO A:150 , HIS A:198 , TYR A:199 , PRO A:202binding site for residue HEM A 1001
02AC2SOFTWARETRP A:45 , GLY A:48 , LEU A:51 , PHE A:104 , HIS A:111 , ILE A:112 , ARG A:114 , SER A:120 , ARG A:125 , THR A:128 , GLY A:132 , MET A:133 , ILE A:135 , HIS A:212 , PHE A:216 , GLY A:220 , ASN A:221 , ASN A:222binding site for residue HEM A 1002
03AC3SOFTWAREMET A:140 , PHE A:144 , TYR A:147 , MET A:154 , GLY A:158 , ILE A:162 , VAL A:293 , PRO A:294 , GLU A:295 , PHE A:298binding site for residue FMX A 1003
04AC4SOFTWAREHIS A:291 , ILE A:292 , TYR A:302 , ARG A:306 , ALA A:382 , GLN A:383 , GLN A:384 , PRO G:150 , CYS G:151 , HIS G:152binding site for residue ASC A 1004
05AC5SOFTWAREMET A:44 , LEU A:103 , ILE A:106 , LEU A:110 , TYR A:117 , TYR A:118 , ARG A:358 , TRP A:368binding site for residue LOP A 1006
06AC6SOFTWAREVAL B:35 , CYS B:36 , CYS B:39 , HIS B:40 , ASN B:96 , PRO B:98 , MET B:103 , ARG B:107 , TYR B:130 , PHE B:160 , ILE B:183 , ALA B:184 , MET B:185binding site for residue HEC B 1001
07AC7SOFTWAREASP B:8 , VAL B:9 , GLU B:14 , GLU B:129binding site for residue SR B 1002
08AC8SOFTWAREPHE A:269 , GLU B:14 , GLY B:15 , LEU B:121 , PHE B:122 , GLY B:124 , LYS B:227binding site for residue BOG B 1003
09AC9SOFTWARECYS C:129 , HIS C:131 , LEU C:132 , CYS C:149 , CYS C:151 , HIS C:152binding site for residue FES C 1001
10AD1SOFTWAREGLN E:58 , GLY E:62 , ILE E:63 , LEU E:65 , ARG E:94 , HIS E:97 , PHE E:104 , THR E:142 , GLY E:146 , TYR E:147 , LEU E:149 , PRO E:150 , HIS E:198 , TYR E:199 , PRO E:202binding site for residue HEM E 1001
11AD2SOFTWARETRP E:45 , GLY E:48 , LEU E:51 , ALA E:52 , PHE E:104 , HIS E:111 , ILE E:112 , ARG E:114 , SER E:120 , ARG E:125 , GLY E:132 , MET E:133 , ILE E:135 , VAL E:209 , HIS E:212 , PHE E:216 , GLY E:220 , ASN E:222binding site for residue HEM E 1002
12AD3SOFTWAREMET E:140 , PHE E:144 , TYR E:147 , MET E:154 , GLY E:158 , VAL E:161 , ILE E:162 , VAL E:293 , PRO E:294 , GLU E:295 , PHE E:298binding site for residue FMX E 1003
13AD4SOFTWAREPRO C:150 , CYS C:151 , HIS C:152 , ALA E:290 , HIS E:291 , ILE E:292 , TYR E:302 , ARG E:306 , ALA E:382 , GLN E:383 , GLN E:384binding site for residue ASC E 1004
14AD5SOFTWAREASN E:42 , MET E:44 , LEU E:110 , TYR E:117 , TYR E:118 , VAL E:262 , ARG E:358 , TRP E:368binding site for residue LOP E 1005
15AD6SOFTWAREASP F:8 , VAL F:9 , GLU F:14 , GLU F:129binding site for residue SR F 1002
16AD7SOFTWAREPHE E:269 , GLU F:14 , GLY F:15 , LEU F:121 , PHE F:122 , GLY F:124 , LYS F:227binding site for residue BOG F 1003
17AD8SOFTWARECYS G:129 , HIS G:131 , LEU G:132 , CYS G:134 , CYS G:149 , CYS G:151 , HIS G:152 , SER G:154binding site for residue FES G 1001
18AD9SOFTWARELEU K:55 , GLN K:58 , GLY K:62 , ILE K:63 , LEU K:65 , ALA K:66 , ARG K:94 , HIS K:97 , THR K:142 , GLY K:146 , TYR K:147 , LEU K:149 , PRO K:150 , HIS K:198 , TYR K:199 , PRO K:202binding site for residue HEM K 1001
19AE1SOFTWARETRP K:45 , GLY K:48 , LEU K:51 , ALA K:52 , PHE K:104 , HIS K:111 , ARG K:114 , SER K:120 , ARG K:125 , GLY K:132 , MET K:133 , ILE K:135 , HIS K:212 , PHE K:216 , GLY K:220 , ASN K:222binding site for residue HEM K 1002
20AE2SOFTWAREMET K:140 , PHE K:144 , TYR K:147 , MET K:154 , ILE K:162 , VAL K:293 , PRO K:294 , GLU K:295 , PHE K:298 , HOH K:1101binding site for residue FMX K 1003
21AE3SOFTWAREALA K:290 , HIS K:291 , ILE K:292 , TYR K:302 , ARG K:306 , ALA K:382 , GLN K:383 , GLN K:384 , CYS Q:151 , HIS Q:152binding site for residue ASC K 1004
22AE4SOFTWAREASN K:42 , MET K:44 , PHE K:113 , TYR K:117 , TYR K:118 , ARG K:358 , PHE K:367 , ALA K:371binding site for residue LOP K 1006
23AE5SOFTWAREALA K:265 , PHE K:269 , GLU L:14 , GLY L:15 , PHE L:122 , GLY L:124 , LYS L:227binding site for residue BOG K 1007
24AE6SOFTWAREASP L:8 , VAL L:9 , GLU L:14 , GLU L:129binding site for residue SR L 1002
25AE7SOFTWARECYS M:129 , HIS M:131 , LEU M:132 , CYS M:149 , CYS M:151 , HIS M:152 , SER M:154binding site for residue FES M 1001
26AE8SOFTWARELEU O:55 , GLN O:58 , GLY O:62 , ILE O:63 , LEU O:65 , ALA O:66 , ARG O:94 , HIS O:97 , ALA O:98 , THR O:142 , GLY O:146 , LEU O:149 , PRO O:150 , HIS O:198 , TYR O:199 , PRO O:202binding site for residue HEM O 1001
27AE9SOFTWARETRP O:45 , GLY O:48 , LEU O:51 , PHE O:104 , HIS O:111 , ARG O:114 , SER O:120 , ARG O:125 , GLY O:132 , MET O:133 , ILE O:135 , VAL O:209 , HIS O:212 , PHE O:216 , GLY O:220 , ASN O:221 , ASN O:222binding site for residue HEM O 1002
28AF1SOFTWAREMET O:140 , PHE O:144 , TYR O:147 , MET O:154 , GLY O:158 , ILE O:162 , VAL O:293 , PRO O:294 , GLU O:295 , PHE O:298 , HOH O:1101binding site for residue FMX O 1003
29AF2SOFTWAREPRO M:150 , CYS M:151 , HIS M:152 , ALA O:290 , HIS O:291 , ILE O:292 , VAL O:293 , TYR O:302 , ARG O:306 , ALA O:382 , GLN O:383 , GLN O:384binding site for residue ASC O 1004
30AF3SOFTWAREMET O:44 , LEU O:103 , ARG O:114 , TYR O:117 , TYR O:118 , VAL O:262 , LEU O:274 , ARG O:358binding site for residue LOP O 1005
31AF4SOFTWAREASP P:8 , VAL P:9 , GLU P:14 , GLU P:129binding site for residue SR P 1002
32AF5SOFTWAREPHE O:269 , GLU P:14 , GLY P:15 , LEU P:121 , PHE P:122 , GLY P:124 , LYS P:227binding site for residue BOG P 1003
33AF6SOFTWARECYS Q:129 , HIS Q:131 , LEU Q:132 , CYS Q:149 , CYS Q:151 , HIS Q:152 , SER Q:154binding site for residue FES Q 1001
34AF7SOFTWAREVAL F:31 , TYR F:32 , VAL F:35 , ALA F:37 , ALA F:38 , CYS F:39 , HIS F:40 , ASN F:96 , PRO F:98 , MET F:103 , ARG F:107 , TYR F:130 , LEU F:135 , PHE F:160 , ILE F:183 , ALA F:184 , MET F:185binding site for Di-peptide HEC F 1001 and CYS F 36
35AF8SOFTWAREVAL F:35 , CYS F:36 , ALA F:37 , ALA F:38 , HIS F:40 , SER F:92 , ALA F:93 , LEU F:94 , ASN F:96 , ALA F:97 , PRO F:98 , MET F:103 , ARG F:107 , TYR F:130 , LEU F:135 , PHE F:160 , ILE F:183 , ALA F:184 , MET F:185binding site for Di-peptide HEC F 1001 and CYS F 39
36AF9SOFTWAREVAL L:35 , CYS L:36 , ALA L:37 , ALA L:38 , HIS L:40 , SER L:92 , ALA L:93 , LEU L:94 , ASN L:96 , ALA L:97 , PRO L:98 , MET L:103 , ARG L:107 , TYR L:130 , LEU L:135 , PHE L:160 , ILE L:183 , ALA L:184 , MET L:185 , PRO L:188binding site for Di-peptide HEC L 1001 and CYS L 39
37AG1SOFTWAREVAL L:31 , TYR L:32 , VAL L:35 , ALA L:37 , ALA L:38 , CYS L:39 , HIS L:40 , LEU L:94 , ASN L:96 , PRO L:98 , MET L:103 , ARG L:107 , TYR L:130 , LEU L:135 , PHE L:160 , ILE L:183 , ALA L:184 , MET L:185 , PRO L:188binding site for Di-peptide HEC L 1001 and CYS L 36
38AG2SOFTWAREVAL P:35 , CYS P:36 , ALA P:37 , ALA P:38 , HIS P:40 , SER P:92 , ALA P:93 , LEU P:94 , ASN P:96 , ALA P:97 , PRO P:98 , MET P:103 , ARG P:107 , TYR P:130 , LEU P:135 , PHE P:160 , ILE P:183 , ALA P:184 , MET P:185binding site for Di-peptide HEC P 1001 and CYS P 39
39AG3SOFTWAREVAL P:31 , TYR P:32 , VAL P:35 , ALA P:37 , ALA P:38 , CYS P:39 , HIS P:40 , ASN P:96 , PRO P:98 , MET P:103 , ARG P:107 , TYR P:130 , LEU P:135 , PHE P:160 , ILE P:183 , ALA P:184 , MET P:185binding site for Di-peptide HEC P 1001 and CYS P 36

(-) SS Bonds  (8, 8)

Asymmetric Unit
No.Residues
1B:145 -B:169
2C:134 -C:151
3F:145 -F:169
4G:134 -G:151
5L:145 -L:169
6M:134 -M:151
7P:145 -P:169
8Q:134 -Q:151

(-) Cis Peptide Bonds  (16, 16)

Asymmetric Unit
No.Residues
1Ala A:123 -Pro A:124
2Trp A:245 -Pro A:246
3Phe A:387 -Pro A:388
4Gly B:112 -Pro B:113
5Ala E:123 -Pro E:124
6Trp E:245 -Pro E:246
7Phe E:387 -Pro E:388
8Gly F:112 -Pro F:113
9Ala K:123 -Pro K:124
10Trp K:245 -Pro K:246
11Phe K:387 -Pro K:388
12Gly L:112 -Pro L:113
13Ala O:123 -Pro O:124
14Trp O:245 -Pro O:246
15Phe O:387 -Pro O:388
16Gly P:112 -Pro P:113

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5KKZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5KKZ)

(-) Exons   (0, 0)

(no "Exon" information available for 5KKZ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:429
                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhh..hhhhhhhhhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhheeehhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh.............hhhhhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz A   3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNAH 431
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422         


Chain B from PDB  Type:PROTEIN  Length:256
                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhhhh.eee......eee...................hhhhhh.........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz B   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      


Chain C from PDB  Type:PROTEIN  Length:179
                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh...eeee.......eeeeeee..eeeeeee.hhhhhhhhhhhhhhhh................hhhhhh......eeeee..........eeeee....eeee....eee.....eee...........eee....eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz C   9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         


Chain E from PDB  Type:PROTEIN  Length:429
                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhh..hhhhhhhhhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhheee..hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh.............hhhhhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz E   3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNAH 431
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422         


Chain F from PDB  Type:PROTEIN  Length:256
                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhhhh.eee......eee...................hhhhhh.........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz F   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      


Chain G from PDB  Type:PROTEIN  Length:179
                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh...eeee.......eeeeeee..eeeeeee.hhhhhhhhhhhhhhhh................hhhhhh......eeeee..........eeeee....eeee....eee.....eee...........eeeee..eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz G   9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         


Chain K from PDB  Type:PROTEIN  Length:429
                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhh..hhhhhhhhhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhheeehhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh.............hhhhhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz K   3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNAH 431
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422         


Chain L from PDB  Type:PROTEIN  Length:256
                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhhhh.eee......eee...................hhhhhh.........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz L   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      


Chain M from PDB  Type:PROTEIN  Length:179
                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh...eeee.......eeeeeee..eeeeeee.hhhhhhhhhhhhhhhh................hhhhhh......eeeee..........eeeee....eeee....eee.....eee...........eeeee..eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz M   9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         


Chain O from PDB  Type:PROTEIN  Length:429
                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhh..hhhhhhhhhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhheeehhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh.............hhhhhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz O   3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNAH 431
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422         


Chain P from PDB  Type:PROTEIN  Length:256
                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhhhh.eee......eee...................hhhhhh.........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz P   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      


Chain Q from PDB  Type:PROTEIN  Length:179
                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh...eeee.......eeeeeee..eeeeeee.hhhhhhhhhhhhhhhh................hhhhhh......eeeee..........eeeee....eeee....eee.....eee...........eeeee..eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kkz Q   9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5KKZ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5KKZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5KKZ)

(-) Gene Ontology  (17, 32)

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  5kkz
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  CYB_RHOSH | Q02761
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CY1_RHOSH | Q02760: 2fyn 2qjk 2qjp 2qjy 5kli
        CYB_RHOSH | Q02761: 2fyn 2qjk 2qjp 2qjy 5kli
        UCRI_RHOSH | Q02762: 2fyn 2nuk 2num 2nve 2nvf 2nvg 2nwf 2qjk 2qjp 2qjy 5kli

(-) Related Entries Specified in the PDB File

5kli 5klv