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(-) Description

Title :  CRYSTAL STRUCTURE ANALYSIS OF MUTANT RHODOBACTER SPHAEROIDES BC1 WITH STIGMATELLIN AND ANTIMYCIN
 
Authors :  L. Esser
Date :  07 Jul 07  (Deposition) - 25 Dec 07  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Biol. Unit 1:  A,B,C,D,E,F  (1x)
Biol. Unit 2:  G,H,I,J,K,L  (1x)
Biol. Unit 3:  M,N,O,P,Q,R  (1x)
Keywords :  Cytochrome B, Tm Helices, Cytochrome C1, C-Terminal Tm Helix, Iron-Sulfur-Protein, N-Terminal Tm, Electron Transport, Heme, Membrane, Metal-Binding, Respiratory Chain, Transmembrane, Transport, 2Fe-2S, Inner Membrane, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  L. Esser, M. Elberry, F. Zhou, C. A. Yu, L. Yu, D. Xia
Inhibitor-Complexed Structures Of The Cytochrome Bc1 From The Photosynthetic Bacterium Rhodobacter Sphaeroides.
J. Biol. Chem. V. 283 2846 2008
PubMed-ID: 18039651  |  Reference-DOI: 10.1074/JBC.M708608200
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CYTOCHROME B
    ChainsA, D, G, J, M, P
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPRKDFBCFBCQ
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GenePETB, FBCB
    MutationYES
    Organism ScientificRHODOBACTER SPHAEROIDES
    Organism Taxid1063
 
Molecule 2 - CYTOCHROME C1
    ChainsB, E, H, K, N, Q
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPRKDFBCFBCQ
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneFBCC
    Organism ScientificRHODOBACTER SPHAEROIDES
    Organism Taxid1063
 
Molecule 3 - UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT
    ChainsC, F, I, L, O, R
    EC Number1.10.2.2
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPRKDFBCFBCQ
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GenePETA, FBCF
    MutationYES
    Organism ScientificRHODOBACTER SPHAEROIDES
    Organism Taxid1063
    SynonymRIESKE IRON-SULFUR PROTEIN, RISP

 Structural Features

(-) Chains, Units

  123456789101112131415161718
Asymmetric Unit ABCDEFGHIJKLMNOPQR
Biological Unit 1 (1x)ABCDEF            
Biological Unit 2 (1x)      GHIJKL      
Biological Unit 3 (1x)            MNOPQR

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 54)

Asymmetric Unit (7, 54)
No.NameCountTypeFull Name
1ANJ6Ligand/Ion(2R,3S,6S,7R,8R)-3-{[3-(FORMYLAMINO)-2-HYDROXYBENZOYL]AMINO}-8-HEXYL-2,6-DIMETHYL-4,9-DIOXO-1,5-DIOXONAN-7-YL (2S)-2-METHYLBUTANOATE
2BGL6Ligand/IonB-2-OCTYLGLUCOSIDE
3FES6Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4HEM18Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
5LOP6Ligand/Ion(1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE
6SMA6Ligand/IonSTIGMATELLIN A
7SR6Ligand/IonSTRONTIUM ION
Biological Unit 1 (6, 16)
No.NameCountTypeFull Name
1ANJ2Ligand/Ion(2R,3S,6S,7R,8R)-3-{[3-(FORMYLAMINO)-2-HYDROXYBENZOYL]AMINO}-8-HEXYL-2,6-DIMETHYL-4,9-DIOXO-1,5-DIOXONAN-7-YL (2S)-2-METHYLBUTANOATE
2BGL2Ligand/IonB-2-OCTYLGLUCOSIDE
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4HEM6Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
5LOP2Ligand/Ion(1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE
6SMA2Ligand/IonSTIGMATELLIN A
7SR-1Ligand/IonSTRONTIUM ION
Biological Unit 2 (6, 16)
No.NameCountTypeFull Name
1ANJ2Ligand/Ion(2R,3S,6S,7R,8R)-3-{[3-(FORMYLAMINO)-2-HYDROXYBENZOYL]AMINO}-8-HEXYL-2,6-DIMETHYL-4,9-DIOXO-1,5-DIOXONAN-7-YL (2S)-2-METHYLBUTANOATE
2BGL2Ligand/IonB-2-OCTYLGLUCOSIDE
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4HEM6Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
5LOP2Ligand/Ion(1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE
6SMA2Ligand/IonSTIGMATELLIN A
7SR-1Ligand/IonSTRONTIUM ION
Biological Unit 3 (6, 16)
No.NameCountTypeFull Name
1ANJ2Ligand/Ion(2R,3S,6S,7R,8R)-3-{[3-(FORMYLAMINO)-2-HYDROXYBENZOYL]AMINO}-8-HEXYL-2,6-DIMETHYL-4,9-DIOXO-1,5-DIOXONAN-7-YL (2S)-2-METHYLBUTANOATE
2BGL2Ligand/IonB-2-OCTYLGLUCOSIDE
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4HEM6Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
5LOP2Ligand/Ion(1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE
6SMA2Ligand/IonSTIGMATELLIN A
7SR-1Ligand/IonSTRONTIUM ION

(-) Sites  (54, 54)

Asymmetric Unit (54, 54)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREPHE A:269 , GLU B:14 , LYS B:227BINDING SITE FOR RESIDUE BGL A 431
02AC2SOFTWAREPHE D:269 , MET D:270 , GLY E:15 , PRO E:16 , LYS E:227BINDING SITE FOR RESIDUE BGL D 431
03AC3SOFTWAREPHE G:269 , GLU H:14 , LYS H:227BINDING SITE FOR RESIDUE BGL G 431
04AC4SOFTWAREPHE J:269 , GLY K:124 , LYS K:227BINDING SITE FOR RESIDUE BGL J 431
05AC5SOFTWAREPHE M:269 , GLY N:15 , PRO N:16 , ASN N:123 , GLY N:124 , LYS N:227BINDING SITE FOR RESIDUE BGL M 431
06AC6SOFTWAREPHE P:269 , PRO Q:16 , ASN Q:123 , LYS Q:227BINDING SITE FOR RESIDUE BGL Q 257
07AC7SOFTWAREASP B:8 , VAL B:9 , GLU B:14 , GLU B:129BINDING SITE FOR RESIDUE SR B 257
08AC8SOFTWAREASP E:8 , VAL E:9 , GLU E:14 , GLU E:129BINDING SITE FOR RESIDUE SR E 257
09AC9SOFTWAREASP H:8 , VAL H:9 , GLU H:14 , GLU H:129BINDING SITE FOR RESIDUE SR H 257
10BC1SOFTWAREASP K:8 , VAL K:9 , GLU K:14BINDING SITE FOR RESIDUE SR K 257
11BC2SOFTWAREASP N:8 , VAL N:9 , GLU N:14 , GLU N:129BINDING SITE FOR RESIDUE SR N 257
12BC3SOFTWAREASP Q:8 , VAL Q:9 , GLU Q:14 , GLU Q:129BINDING SITE FOR RESIDUE SR Q 258
13BC4SOFTWARETRP A:45 , GLY A:48 , LEU A:51 , ALA A:52 , VAL A:108 , HIS A:111 , ARG A:114 , SER A:120 , ARG A:125 , THR A:128 , TRP A:129 , GLY A:132 , MET A:133 , ILE A:135 , VAL A:209 , HIS A:212 , PHE A:216 , GLY A:220 , ASN A:221 , ASN A:222 , ANJ A:504BINDING SITE FOR RESIDUE HEM A 501
14BC5SOFTWAREGLN A:58 , GLY A:62 , ILE A:63 , ARG A:94 , HIS A:97 , ALA A:98 , GLY A:146 , LEU A:149 , PRO A:150 , HIS A:198 , TYR A:199 , PRO A:202BINDING SITE FOR RESIDUE HEM A 502
15BC6SOFTWAREVAL B:35 , CYS B:36 , CYS B:39 , HIS B:40 , LEU B:94 , ASN B:96 , PRO B:98 , MET B:103 , ARG B:107 , TYR B:130 , LEU B:135 , PHE B:160 , ILE B:183 , ALA B:184 , MET B:185 , PRO B:188 , LEU B:189BINDING SITE FOR RESIDUE HEM B 301
16BC7SOFTWARECYS C:129 , HIS C:131 , LEU C:132 , GLY C:133 , CYS C:149 , HIS C:152 , GLY C:153 , SER C:154BINDING SITE FOR RESIDUE FES C 200
17BC8SOFTWARETRP D:45 , GLY D:48 , LEU D:51 , ALA D:52 , HIS D:111 , ILE D:112 , ARG D:114 , ARG D:125 , THR D:128 , TRP D:129 , GLY D:132 , MET D:133 , ILE D:135 , VAL D:209 , HIS D:212 , PHE D:216 , GLY D:220 , ASN D:221 , ASN D:222 , ANJ D:504BINDING SITE FOR RESIDUE HEM D 501
18BC9SOFTWAREGLN D:58 , GLY D:62 , ILE D:63 , TYR D:69 , ARG D:94 , HIS D:97 , PHE D:104 , GLY D:146 , LEU D:149 , PRO D:150 , HIS D:198 , TYR D:199 , PRO D:202BINDING SITE FOR RESIDUE HEM D 502
19CC1SOFTWARECYS E:36 , CYS E:39 , HIS E:40 , LEU E:94 , ASN E:96 , PRO E:98 , MET E:103 , ARG E:107 , TYR E:130 , LEU E:135 , PHE E:160 , MET E:185 , PRO E:188 , LEU E:189BINDING SITE FOR RESIDUE HEM E 301
20CC2SOFTWARECYS F:129 , HIS F:131 , LEU F:132 , GLY F:133 , CYS F:149 , HIS F:152 , SER F:154BINDING SITE FOR RESIDUE FES F 200
21CC3SOFTWARETRP G:45 , GLY G:48 , LEU G:51 , ALA G:52 , HIS G:111 , ILE G:112 , ARG G:114 , ARG G:125 , TRP G:129 , GLY G:132 , MET G:133 , ILE G:135 , TYR G:136 , VAL G:209 , HIS G:212 , PHE G:216 , ASN G:222 , ANJ G:505BINDING SITE FOR RESIDUE HEM G 501
22CC4SOFTWAREGLN G:58 , GLY G:62 , ILE G:63 , VAL G:80 , ARG G:94 , HIS G:97 , ALA G:98 , PHE G:104 , GLY G:146 , LEU G:149 , PRO G:150 , HIS G:198 , TYR G:199 , PRO G:202BINDING SITE FOR RESIDUE HEM G 502
23CC5SOFTWAREVAL H:35 , CYS H:36 , CYS H:39 , HIS H:40 , LEU H:94 , ASN H:96 , PRO H:98 , MET H:103 , ARG H:107 , TYR H:130 , LEU H:135 , ILE H:183 , ALA H:184 , MET H:185BINDING SITE FOR RESIDUE HEM H 301
24CC6SOFTWARECYS I:129 , HIS I:131 , LEU I:132 , GLY I:133 , CYS I:149 , HIS I:152 , SER I:154BINDING SITE FOR RESIDUE FES I 200
25CC7SOFTWARETRP J:45 , GLY J:48 , LEU J:51 , ALA J:52 , HIS J:111 , ARG J:114 , ARG J:125 , TRP J:129 , GLY J:132 , MET J:133 , ILE J:135 , TYR J:136 , VAL J:209 , HIS J:212 , PHE J:216 , GLY J:220 , ASN J:222 , ANJ J:505BINDING SITE FOR RESIDUE HEM J 501
26CC8SOFTWAREGLN J:58 , GLY J:62 , ILE J:63 , ARG J:94 , HIS J:97 , THR J:142 , GLY J:146 , LEU J:149 , PRO J:150 , HIS J:198 , TYR J:199 , PRO J:202BINDING SITE FOR RESIDUE HEM J 502
27CC9SOFTWAREVAL K:35 , CYS K:36 , CYS K:39 , HIS K:40 , LEU K:94 , ASN K:96 , MET K:103 , ARG K:107 , TYR K:130 , LEU K:135 , PHE K:160 , ILE K:183 , ALA K:184 , MET K:185 , PRO K:188BINDING SITE FOR RESIDUE HEM K 301
28DC1SOFTWARECYS L:129 , HIS L:131 , LEU L:132 , GLY L:133 , CYS L:149 , HIS L:152 , SER L:154BINDING SITE FOR RESIDUE FES L 200
29DC2SOFTWARETRP M:45 , GLY M:48 , LEU M:51 , ALA M:52 , HIS M:111 , ARG M:114 , SER M:120 , ARG M:125 , THR M:128 , TRP M:129 , GLY M:132 , MET M:133 , ILE M:135 , VAL M:209 , HIS M:212 , PHE M:216 , GLY M:220 , ASN M:221 , ASN M:222 , ANJ M:505BINDING SITE FOR RESIDUE HEM M 501
30DC3SOFTWAREGLN M:58 , GLY M:62 , ILE M:63 , ARG M:94 , HIS M:97 , ALA M:98 , THR M:142 , GLY M:146 , LEU M:149 , PRO M:150 , HIS M:198 , TYR M:199 , PRO M:202BINDING SITE FOR RESIDUE HEM M 502
31DC4SOFTWAREVAL N:35 , CYS N:36 , CYS N:39 , HIS N:40 , LEU N:94 , ASN N:96 , PRO N:98 , ARG N:107 , TYR N:130 , LEU N:135 , PHE N:160 , ILE N:183 , ALA N:184 , MET N:185 , LEU N:189BINDING SITE FOR RESIDUE HEM N 301
32DC5SOFTWARECYS O:129 , HIS O:131 , LEU O:132 , GLY O:133 , CYS O:149 , HIS O:152 , SER O:154BINDING SITE FOR RESIDUE FES O 200
33DC6SOFTWARETRP P:45 , GLY P:48 , LEU P:51 , ALA P:52 , HIS P:111 , ARG P:114 , ARG P:125 , THR P:128 , TRP P:129 , GLY P:132 , MET P:133 , ILE P:135 , VAL P:209 , HIS P:212 , PHE P:216 , GLY P:220 , ASN P:222 , ANJ P:505BINDING SITE FOR RESIDUE HEM P 501
34DC7SOFTWAREGLN P:58 , GLY P:62 , ILE P:63 , ARG P:94 , HIS P:97 , THR P:142 , GLY P:146 , TYR P:147 , LEU P:149 , PRO P:150 , HIS P:198 , TYR P:199 , PRO P:202BINDING SITE FOR RESIDUE HEM P 502
35DC8SOFTWAREVAL Q:35 , CYS Q:36 , CYS Q:39 , HIS Q:40 , LEU Q:94 , ASN Q:96 , PRO Q:98 , MET Q:103 , ARG Q:107 , TYR Q:130 , LEU Q:135 , PHE Q:160 , ILE Q:183 , ALA Q:184 , MET Q:185 , LEU Q:189BINDING SITE FOR RESIDUE HEM Q 301
36DC9SOFTWARECYS R:129 , HIS R:131 , LEU R:132 , GLY R:133 , CYS R:149 , CYS R:151 , HIS R:152 , SER R:154BINDING SITE FOR RESIDUE FES R 200
37EC1SOFTWAREPHE A:144 , MET A:154 , GLY A:158 , VAL A:161 , ILE A:162 , VAL A:293 , PRO A:294 , GLU A:295 , PHE A:298 , TYR A:302 , MET A:336 , CYS F:151 , HIS F:152BINDING SITE FOR RESIDUE SMA A 1
38EC2SOFTWAREHIS C:152 , LEU D:137 , GLY D:158 , VAL D:161 , ILE D:162 , VAL D:293 , PRO D:294 , GLU D:295 , PHE D:298 , TYR D:302 , MET D:336 , PHE D:337BINDING SITE FOR RESIDUE SMA D 2
39EC3SOFTWAREPHE G:144 , MET G:145 , GLY G:158 , VAL G:161 , ILE G:162 , VAL G:293 , PRO G:294 , GLU G:295 , PHE G:298 , TYR G:302 , MET G:336 , PHE G:337 , HIS L:152BINDING SITE FOR RESIDUE SMA G 503
40EC4SOFTWARECYS I:151 , HIS I:152 , MET J:140 , MET J:145 , GLY J:158 , VAL J:161 , ILE J:162 , LEU J:180 , PHE J:194 , VAL J:293 , PRO J:294 , GLU J:295 , PHE J:298 , TYR J:302 , MET J:336 , ILE J:340BINDING SITE FOR RESIDUE SMA J 503
41EC5SOFTWARELEU M:137 , PHE M:144 , MET M:145 , GLY M:158 , VAL M:161 , ILE M:162 , PHE M:194 , VAL M:293 , PRO M:294 , GLU M:295 , PHE M:298 , TYR M:302 , MET M:336 , HIS R:152BINDING SITE FOR RESIDUE SMA M 503
42EC6SOFTWAREHIS O:152 , PHE P:144 , GLY P:158 , VAL P:161 , ILE P:162 , LEU P:180 , VAL P:293 , PRO P:294 , GLU P:295 , PHE P:298 , TYR P:302 , MET P:336BINDING SITE FOR RESIDUE SMA P 503
43EC7SOFTWARELEU A:103 , ILE A:106 , PHE A:113 , TYR A:117 , TYR A:118 , PHE A:263 , ARG A:358 , PHE A:374BINDING SITE FOR RESIDUE LOP A 503
44EC8SOFTWAREMET D:44 , LEU D:103 , PHE D:113 , TYR D:117 , TYR D:118 , PHE D:263 , ARG D:358 , PHE D:374BINDING SITE FOR RESIDUE LOP D 503
45EC9SOFTWAREMET G:44 , TRP G:47 , LEU G:103 , PHE G:113 , TYR G:117 , TYR G:118 , PHE G:263 , TRP G:296 , ARG G:358 , PHE G:367BINDING SITE FOR RESIDUE LOP G 504
46FC1SOFTWAREASN J:42 , PHE J:113 , ARG J:114 , TYR J:117 , TYR J:118 , VAL J:262 , ARG J:358 , PHE J:374BINDING SITE FOR RESIDUE LOP J 504
47FC2SOFTWAREMET M:44 , LEU M:103 , PHE M:113 , ARG M:114 , TYR M:117 , TYR M:118 , ARG M:358 , TRP M:368 , PHE M:374BINDING SITE FOR RESIDUE LOP M 504
48FC3SOFTWAREMET P:44 , LEU P:103 , PHE P:113 , TYR P:117 , TYR P:118 , PHE P:263 , LEU P:274 , ARG P:358 , TRP P:368 , PHE P:374BINDING SITE FOR RESIDUE LOP P 504
49FC4SOFTWARETRP A:45 , VAL A:49 , ALA A:52 , VAL A:56 , VAL A:209 , ILE A:213 , PHE A:216 , ASN A:221 , PHE A:244 , ASP A:252 , HEM A:501BINDING SITE FOR RESIDUE ANJ A 504
50FC5SOFTWAREALA D:29 , TRP D:45 , VAL D:49 , ALA D:52 , ILE D:213 , PHE D:216 , PHE D:244 , ASP D:252 , HEM D:501BINDING SITE FOR RESIDUE ANJ D 504
51FC6SOFTWARETRP G:45 , VAL G:49 , ALA G:52 , ILE G:213 , PHE G:216 , PHE G:244 , PHE G:248 , ASP G:252 , HEM G:501BINDING SITE FOR RESIDUE ANJ G 505
52FC7SOFTWAREALA J:29 , TRP J:45 , VAL J:49 , ALA J:52 , ILE J:213 , PHE J:216 , PHE J:244 , ASP J:252 , HEM J:501BINDING SITE FOR RESIDUE ANJ J 505
53FC8SOFTWARETHR M:32 , TRP M:45 , VAL M:49 , ALA M:52 , ILE M:213 , PHE M:216 , ASN M:221 , PHE M:244 , ASP M:252 , HEM M:501BINDING SITE FOR RESIDUE ANJ M 505
54FC9SOFTWAREALA P:29 , TRP P:45 , VAL P:49 , ALA P:52 , LEU P:55 , ILE P:213 , PHE P:216 , PHE P:244 , PHE P:248 , ASP P:252 , HEM P:501BINDING SITE FOR RESIDUE ANJ P 505

(-) SS Bonds  (12, 12)

Asymmetric Unit
No.Residues
1B:145 -B:169
2C:134 -C:151
3E:145 -E:169
4F:134 -F:151
5H:145 -H:169
6I:134 -I:151
7K:145 -K:169
8L:134 -L:151
9N:145 -N:169
10O:134 -O:151
11Q:145 -Q:169
12R:134 -R:151

(-) Cis Peptide Bonds  (24, 24)

Asymmetric Unit
No.Residues
1Ala A:123 -Pro A:124
2Trp A:245 -Pro A:246
3Phe A:387 -Pro A:388
4Gly B:112 -Pro B:113
5Ala D:123 -Pro D:124
6Trp D:245 -Pro D:246
7Phe D:387 -Pro D:388
8Gly E:112 -Pro E:113
9Ala G:123 -Pro G:124
10Trp G:245 -Pro G:246
11Phe G:387 -Pro G:388
12Gly H:112 -Pro H:113
13Ala J:123 -Pro J:124
14Trp J:245 -Pro J:246
15Phe J:387 -Pro J:388
16Gly K:112 -Pro K:113
17Ala M:123 -Pro M:124
18Trp M:245 -Pro M:246
19Phe M:387 -Pro M:388
20Gly N:112 -Pro N:113
21Ala P:123 -Pro P:124
22Trp P:245 -Pro P:246
23Phe P:387 -Pro P:388
24Gly Q:112 -Pro Q:113

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2QJK)

(-) PROSITE Motifs  (4, 24)

Asymmetric Unit (4, 24)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTB_NTERPS51002 Cytochrome b/b6 N-terminal region profile.CYB_RHOSH15-225
 
 
 
 
 
  6A:15-225
D:15-225
G:15-225
J:15-225
M:15-225
P:15-225
2CYTCPS51007 Cytochrome c family profile.CY1_RHOSH45-164
 
 
 
 
 
  6B:23-142
E:23-142
H:23-142
K:23-142
N:23-142
Q:23-142
3RIESKEPS51296 Rieske [2Fe-2S] iron-sulfur domain profile.UCRI_RHOSH117-185
 
 
 
 
 
  6C:117-185
F:117-185
I:117-185
L:117-185
O:117-185
R:117-185
4CYTB_CTERPS51003 Cytochrome b/b6 C-terminal region profile.CYB_RHOSH234-422
 
 
 
 
 
  6A:234-422
D:234-422
G:234-422
J:234-422
M:234-422
P:234-422
Biological Unit 1 (4, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTB_NTERPS51002 Cytochrome b/b6 N-terminal region profile.CYB_RHOSH15-225
 
 
 
 
 
  2A:15-225
D:15-225
-
-
-
-
2CYTCPS51007 Cytochrome c family profile.CY1_RHOSH45-164
 
 
 
 
 
  2B:23-142
E:23-142
-
-
-
-
3RIESKEPS51296 Rieske [2Fe-2S] iron-sulfur domain profile.UCRI_RHOSH117-185
 
 
 
 
 
  2C:117-185
F:117-185
-
-
-
-
4CYTB_CTERPS51003 Cytochrome b/b6 C-terminal region profile.CYB_RHOSH234-422
 
 
 
 
 
  2A:234-422
D:234-422
-
-
-
-
Biological Unit 2 (4, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTB_NTERPS51002 Cytochrome b/b6 N-terminal region profile.CYB_RHOSH15-225
 
 
 
 
 
  2-
-
G:15-225
J:15-225
-
-
2CYTCPS51007 Cytochrome c family profile.CY1_RHOSH45-164
 
 
 
 
 
  2-
-
H:23-142
K:23-142
-
-
3RIESKEPS51296 Rieske [2Fe-2S] iron-sulfur domain profile.UCRI_RHOSH117-185
 
 
 
 
 
  2-
-
I:117-185
L:117-185
-
-
4CYTB_CTERPS51003 Cytochrome b/b6 C-terminal region profile.CYB_RHOSH234-422
 
 
 
 
 
  2-
-
G:234-422
J:234-422
-
-
Biological Unit 3 (4, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CYTB_NTERPS51002 Cytochrome b/b6 N-terminal region profile.CYB_RHOSH15-225
 
 
 
 
 
  2-
-
-
-
M:15-225
P:15-225
2CYTCPS51007 Cytochrome c family profile.CY1_RHOSH45-164
 
 
 
 
 
  2-
-
-
-
N:23-142
Q:23-142
3RIESKEPS51296 Rieske [2Fe-2S] iron-sulfur domain profile.UCRI_RHOSH117-185
 
 
 
 
 
  2-
-
-
-
O:117-185
R:117-185
4CYTB_CTERPS51003 Cytochrome b/b6 C-terminal region profile.CYB_RHOSH234-422
 
 
 
 
 
  2-
-
-
-
M:234-422
P:234-422

(-) Exons   (0, 0)

(no "Exon" information available for 2QJK)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:428
 aligned with CYB_RHOSH | Q02761 from UniProtKB/Swiss-Prot  Length:445

    Alignment length:428
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        
            CYB_RHOSH     3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkA00 A:3-430 Cytochrome Bc1 Complex; Chain C                                                                                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhh..hhhhhhhhhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhheeehhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh................hhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------CYTB_NTER  PDB: A:15-225 UniProt: 15-225                                                                                                                                                                           --------CYTB_CTER  PDB: A:234-422 UniProt: 234-422                                                                                                                                                   -------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk A   3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        

Chain B from PDB  Type:PROTEIN  Length:256
 aligned with CY1_RHOSH | Q02760 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
            CY1_RHOSH    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAADLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkB01 B:1-221 Cytochrome c                                                                                                                                                                                                 2qjkB02 B:222-256                   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhhhhh...............................hhhhh..........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------CYTC  PDB: B:23-142 UniProt: 45-164                                                                                     ------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk B   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain B from PDB  Type:PROTEIN  Length:256
 aligned with Q3IY11_RHOS4 | Q3IY11 from UniProtKB/TrEMBL  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
         Q3IY11_RHOS4    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkB01 B:1-221 Cytochrome c                                                                                                                                                                                                 2qjkB02 B:222-256                   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhhhhh...............................hhhhh..........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk B   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain C from PDB  Type:PROTEIN  Length:179
 aligned with UCRI_RHOSH | Q02762 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:179
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         
           UCRI_RHOSH     9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkC01 C:9-41 Single helix bin  2qjkC02 C:42-187 'Rieske'-like iron-sulphur domains                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............ee.......eeeeeee..eeeeeee.hhhhhhhhhhhhhhhh................hhhhh.......eeeee..........eeeee....eeee....eee.....eee.............eee..ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------RIESKE  PDB: C:117-185 UniProt: 117-185                              -- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk C   9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         

Chain D from PDB  Type:PROTEIN  Length:428
 aligned with CYB_RHOSH | Q02761 from UniProtKB/Swiss-Prot  Length:445

    Alignment length:428
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        
            CYB_RHOSH     3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkD00 D:3-430 Cytochrome Bc1 Complex; Chain C                                                                                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhh..hhhhhhhhhhhheee...hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhheee..hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh................hhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh.hhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------CYTB_NTER  PDB: D:15-225 UniProt: 15-225                                                                                                                                                                           --------CYTB_CTER  PDB: D:234-422 UniProt: 234-422                                                                                                                                                   -------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk D   3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        

Chain E from PDB  Type:PROTEIN  Length:256
 aligned with CY1_RHOSH | Q02760 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
            CY1_RHOSH    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAADLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkE01 E:1-221 Cytochrome c                                                                                                                                                                                                 2qjkE02 E:222-256                   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhh...eee......eee..................................hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------CYTC  PDB: E:23-142 UniProt: 45-164                                                                                     ------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk E   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain E from PDB  Type:PROTEIN  Length:256
 aligned with Q3IY11_RHOS4 | Q3IY11 from UniProtKB/TrEMBL  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
         Q3IY11_RHOS4    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkE01 E:1-221 Cytochrome c                                                                                                                                                                                                 2qjkE02 E:222-256                   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhh...eee......eee..................................hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk E   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain F from PDB  Type:PROTEIN  Length:179
 aligned with UCRI_RHOSH | Q02762 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:179
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         
           UCRI_RHOSH     9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkF01 F:9-41 Single helix bin  2qjkF02 F:42-187 'Rieske'-like iron-sulphur domains                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............ee.......eeeeeee..eeeeeee.hhhhhhhhhh.hhhhh................hhhhhh......eeeee..........eeeee....eeee....eee.....eee.............eee..ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------RIESKE  PDB: F:117-185 UniProt: 117-185                              -- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk F   9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         

Chain G from PDB  Type:PROTEIN  Length:428
 aligned with CYB_RHOSH | Q02761 from UniProtKB/Swiss-Prot  Length:445

    Alignment length:428
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        
            CYB_RHOSH     3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkG00 G:3-430 Cytochrome Bc1 Complex; Chain C                                                                                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhh..hhhhhhhhhhhheee...hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhheeehhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh................hhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------CYTB_NTER  PDB: G:15-225 UniProt: 15-225                                                                                                                                                                           --------CYTB_CTER  PDB: G:234-422 UniProt: 234-422                                                                                                                                                   -------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk G   3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        

Chain H from PDB  Type:PROTEIN  Length:256
 aligned with CY1_RHOSH | Q02760 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
            CY1_RHOSH    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAADLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkH01 H:1-221 Cytochrome c                                                                                                                                                                                                 2qjkH02 H:222-256                   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhh...eee......eee...................hhhhhh.........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------CYTC  PDB: H:23-142 UniProt: 45-164                                                                                     ------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk H   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain H from PDB  Type:PROTEIN  Length:256
 aligned with Q3IY11_RHOS4 | Q3IY11 from UniProtKB/TrEMBL  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
         Q3IY11_RHOS4    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkH01 H:1-221 Cytochrome c                                                                                                                                                                                                 2qjkH02 H:222-256                   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhh...eee......eee...................hhhhhh.........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk H   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain I from PDB  Type:PROTEIN  Length:179
 aligned with UCRI_RHOSH | Q02762 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:179
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         
           UCRI_RHOSH     9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkI01 I:9-41 Single helix bin  2qjkI02 I:42-187 'Rieske'-like iron-sulphur domains                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............ee.......eeeeeee..eeeeeee.hhhhhhhhhh.hhhhh................hhhhh.......eeeee..........eeeee...eeeee....eeee....eee.............eee..ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------RIESKE  PDB: I:117-185 UniProt: 117-185                              -- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk I   9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         

Chain J from PDB  Type:PROTEIN  Length:428
 aligned with CYB_RHOSH | Q02761 from UniProtKB/Swiss-Prot  Length:445

    Alignment length:428
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        
            CYB_RHOSH     3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkJ00 J:3-430 Cytochrome Bc1 Complex; Chain C                                                                                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhh..hhhhhhhhhhhheee.......hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhheeehhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh................hhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh.hhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------CYTB_NTER  PDB: J:15-225 UniProt: 15-225                                                                                                                                                                           --------CYTB_CTER  PDB: J:234-422 UniProt: 234-422                                                                                                                                                   -------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk J   3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        

Chain K from PDB  Type:PROTEIN  Length:256
 aligned with CY1_RHOSH | Q02760 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
            CY1_RHOSH    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAADLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkK01 K:1-221 Cytochrome c                                                                                                                                                                                                 2qjkK02 K:222-256                   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhh...eee......eee...................hhhhh..........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------CYTC  PDB: K:23-142 UniProt: 45-164                                                                                     ------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk K   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain K from PDB  Type:PROTEIN  Length:256
 aligned with Q3IY11_RHOS4 | Q3IY11 from UniProtKB/TrEMBL  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
         Q3IY11_RHOS4    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkK01 K:1-221 Cytochrome c                                                                                                                                                                                                 2qjkK02 K:222-256                   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhh...eee......eee...................hhhhh..........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk K   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain L from PDB  Type:PROTEIN  Length:179
 aligned with UCRI_RHOSH | Q02762 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:179
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         
           UCRI_RHOSH     9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkL01 L:9-41 Single helix bin  2qjkL02 L:42-187 'Rieske'-like iron-sulphur domains                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............ee.......eeeeeee..eeeeeee.hhhhhhhhhhhhhhhh................hhhhh.......eeeee..........eeeee....eeee....eee.....eee.............eee..ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------RIESKE  PDB: L:117-185 UniProt: 117-185                              -- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk L   9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         

Chain M from PDB  Type:PROTEIN  Length:428
 aligned with CYB_RHOSH | Q02761 from UniProtKB/Swiss-Prot  Length:445

    Alignment length:428
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        
            CYB_RHOSH     3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkM00 M:3-430 Cytochrome Bc1 Complex; Chain C                                                                                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhh..hhhhhhhhhhhheee...hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhheeehhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh................hhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------CYTB_NTER  PDB: M:15-225 UniProt: 15-225                                                                                                                                                                           --------CYTB_CTER  PDB: M:234-422 UniProt: 234-422                                                                                                                                                   -------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk M   3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        

Chain N from PDB  Type:PROTEIN  Length:256
 aligned with CY1_RHOSH | Q02760 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
            CY1_RHOSH    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAADLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkN01 N:1-221 Cytochrome c                                                                                                                                                                                                 2qjkN02 N:222-256                   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhh...eee......eee...................hhhhhh.........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------CYTC  PDB: N:23-142 UniProt: 45-164                                                                                     ------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk N   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain N from PDB  Type:PROTEIN  Length:256
 aligned with Q3IY11_RHOS4 | Q3IY11 from UniProtKB/TrEMBL  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
         Q3IY11_RHOS4    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkN01 N:1-221 Cytochrome c                                                                                                                                                                                                 2qjkN02 N:222-256                   CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhh...eee......eee...................hhhhhh.........hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk N   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain O from PDB  Type:PROTEIN  Length:179
 aligned with UCRI_RHOSH | Q02762 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:179
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         
           UCRI_RHOSH     9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkO01 O:9-41 Single helix bin  2qjkO02 O:42-187 'Rieske'-like iron-sulphur domains                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............ee.......eeeeeee..eeeeeee.hhhhhhhhhh......................hhhhh.......eeeee..........eeeee....eeee....eee.....eee.............eee..ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------RIESKE  PDB: O:117-185 UniProt: 117-185                              -- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk O   9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         

Chain P from PDB  Type:PROTEIN  Length:428
 aligned with CYB_RHOSH | Q02761 from UniProtKB/Swiss-Prot  Length:445

    Alignment length:428
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        
            CYB_RHOSH     3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkP00 P:3-430 Cytochrome Bc1 Complex; Chain C                                                                                                                                                                                                                                                                                                                                                                                              CATH domains
           Pfam domains (1) ---------------------------------------------------------------------------------------------------Cytochrom_B_N_2-2qjkP01 P:102-277                                                                                                                                               ----Cytochrom_B_C-2qjkP07 P:282-416                                                                                                        -------------- Pfam domains (1)
           Pfam domains (2) ---------------------------------------------------------------------------------------------------Cytochrom_B_N_2-2qjkP02 P:102-277                                                                                                                                               ----Cytochrom_B_C-2qjkP08 P:282-416                                                                                                        -------------- Pfam domains (2)
           Pfam domains (3) ---------------------------------------------------------------------------------------------------Cytochrom_B_N_2-2qjkP03 P:102-277                                                                                                                                               ----Cytochrom_B_C-2qjkP09 P:282-416                                                                                                        -------------- Pfam domains (3)
           Pfam domains (4) ---------------------------------------------------------------------------------------------------Cytochrom_B_N_2-2qjkP04 P:102-277                                                                                                                                               ----Cytochrom_B_C-2qjkP10 P:282-416                                                                                                        -------------- Pfam domains (4)
           Pfam domains (5) ---------------------------------------------------------------------------------------------------Cytochrom_B_N_2-2qjkP05 P:102-277                                                                                                                                               ----Cytochrom_B_C-2qjkP11 P:282-416                                                                                                        -------------- Pfam domains (5)
           Pfam domains (6) ---------------------------------------------------------------------------------------------------Cytochrom_B_N_2-2qjkP06 P:102-277                                                                                                                                               ----Cytochrom_B_C-2qjkP12 P:282-416                                                                                                        -------------- Pfam domains (6)
         Sec.struct. author ..........hhhhhhhhh..hhhhhhhhhhhheee...hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhheeehhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh................hhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------CYTB_NTER  PDB: P:15-225 UniProt: 15-225                                                                                                                                                                           --------CYTB_CTER  PDB: P:234-422 UniProt: 234-422                                                                                                                                                   -------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk P   3 GIPHDHYEPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA 430
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422        

Chain Q from PDB  Type:PROTEIN  Length:256
 aligned with CY1_RHOSH | Q02760 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
            CY1_RHOSH    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAADLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkQ01 Q:1-221 Cytochrome c                                                                                                                                                                                                 2qjkQ02 Q:222-256                   CATH domains
           Pfam domains (1) ----------Cytochrom_C1-2qjkQ01 Q:11-255                                                                                                                                                                                                                        - Pfam domains (1)
           Pfam domains (2) ----------Cytochrom_C1-2qjkQ02 Q:11-255                                                                                                                                                                                                                        - Pfam domains (2)
           Pfam domains (3) ----------Cytochrom_C1-2qjkQ03 Q:11-255                                                                                                                                                                                                                        - Pfam domains (3)
           Pfam domains (4) ----------Cytochrom_C1-2qjkQ04 Q:11-255                                                                                                                                                                                                                        - Pfam domains (4)
           Pfam domains (5) ----------Cytochrom_C1-2qjkQ05 Q:11-255                                                                                                                                                                                                                        - Pfam domains (5)
           Pfam domains (6) ----------Cytochrom_C1-2qjkQ06 Q:11-255                                                                                                                                                                                                                        - Pfam domains (6)
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhh...eee......eee..................................hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------CYTC  PDB: Q:23-142 UniProt: 45-164                                                                                     ------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk Q   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain Q from PDB  Type:PROTEIN  Length:256
 aligned with Q3IY11_RHOS4 | Q3IY11 from UniProtKB/TrEMBL  Length:285

    Alignment length:256
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      
         Q3IY11_RHOS4    23 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 278
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkQ01 Q:1-221 Cytochrome c                                                                                                                                                                                                 2qjkQ02 Q:222-256                   CATH domains
           Pfam domains (1) ----------Cytochrom_C1-2qjkQ01 Q:11-255                                                                                                                                                                                                                        - Pfam domains (1)
           Pfam domains (2) ----------Cytochrom_C1-2qjkQ02 Q:11-255                                                                                                                                                                                                                        - Pfam domains (2)
           Pfam domains (3) ----------Cytochrom_C1-2qjkQ03 Q:11-255                                                                                                                                                                                                                        - Pfam domains (3)
           Pfam domains (4) ----------Cytochrom_C1-2qjkQ04 Q:11-255                                                                                                                                                                                                                        - Pfam domains (4)
           Pfam domains (5) ----------Cytochrom_C1-2qjkQ05 Q:11-255                                                                                                                                                                                                                        - Pfam domains (5)
           Pfam domains (6) ----------Cytochrom_C1-2qjkQ06 Q:11-255                                                                                                                                                                                                                        - Pfam domains (6)
         Sec.struct. author ....................hhhhhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhh...eee......eee..................................hhhhhhhh.hhhhhhhhhhhh.....hhhhh.......eee........hhhhh..........eee...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk Q   1 AGGGHVEDVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYATQFTVTDEETGEDREGKPTDHFPHSALENAPDLSLMAKARAGFHGPMGTGISQLFNGIGGPEYIYSVLTGFPEEPPKCAEGHEPDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIAMPPPLMDDLVEYADGHDASVHAMAEDVSAFLMWAAEPKLMARKQAGFTAVMFLTVLSVLLYLTNKRLWAGVK 256
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250      

Chain R from PDB  Type:PROTEIN  Length:179
 aligned with UCRI_RHOSH | Q02762 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:179
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         
           UCRI_RHOSH     9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qjkR01 R:9-41 Single helix bin  2qjkR02 R:42-187 'Rieske'-like iron-sulphur domains                                                                                                CATH domains
           Pfam domains (1) UCR_Fe-S_N-2qjkR07 R:9-41        -----------------------------------------------------Rieske-2qjkR01 R:95-180                                                               ------- Pfam domains (1)
           Pfam domains (2) UCR_Fe-S_N-2qjkR08 R:9-41        -----------------------------------------------------Rieske-2qjkR02 R:95-180                                                               ------- Pfam domains (2)
           Pfam domains (3) UCR_Fe-S_N-2qjkR09 R:9-41        -----------------------------------------------------Rieske-2qjkR03 R:95-180                                                               ------- Pfam domains (3)
           Pfam domains (4) UCR_Fe-S_N-2qjkR10 R:9-41        -----------------------------------------------------Rieske-2qjkR04 R:95-180                                                               ------- Pfam domains (4)
           Pfam domains (5) UCR_Fe-S_N-2qjkR11 R:9-41        -----------------------------------------------------Rieske-2qjkR05 R:95-180                                                               ------- Pfam domains (5)
           Pfam domains (6) UCR_Fe-S_N-2qjkR12 R:9-41        -----------------------------------------------------Rieske-2qjkR06 R:95-180                                                               ------- Pfam domains (6)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............ee.......eeeeeee..eeeeeee.hhhhhhhhhh......................hhhhhh......eeeee..........eeeee...eeeee....eeee....eee.............eee..ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------RIESKE  PDB: R:117-185 UniProt: 117-185                              -- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qjk R   9 GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2QJK)

(-) CATH Domains  (5, 30)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (5, 30)

Asymmetric Unit
(-)
Clan: TAT (4)

(-) Gene Ontology  (17, 40)

Asymmetric Unit(hide GO term definitions)
Chain A,D,G,J,M,P   (CYB_RHOSH | Q02761)
molecular function
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0008121    ubiquinol-cytochrome-c reductase activity    Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.
biological process
    GO:1902600    hydrogen ion transmembrane transport    The directed movement of hydrogen ion (proton) across a membrane.
    GO:0006122    mitochondrial electron transport, ubiquinol to cytochrome c    The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0022904    respiratory electron transport chain    A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0070469    respiratory chain    The protein complexes that form the electron transport system (the respiratory chain), associated with a cell membrane, usually the plasma membrane (in prokaryotes) or the inner mitochondrial membrane (on eukaryotes). The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.
    GO:0045275    respiratory chain complex III    A protein complex that transfers electrons from ubiquinol to cytochrome c and translocates two protons across a membrane. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome c1, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species.

Chain B,E,H,K,N,Q   (CY1_RHOSH | Q02760)
molecular function
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0020037    heme binding    Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0070469    respiratory chain    The protein complexes that form the electron transport system (the respiratory chain), associated with a cell membrane, usually the plasma membrane (in prokaryotes) or the inner mitochondrial membrane (on eukaryotes). The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.

Chain B,E,H,K,N,Q   (Q3IY11_RHOS4 | Q3IY11)
molecular function
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0020037    heme binding    Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0008121    ubiquinol-cytochrome-c reductase activity    Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.
biological process
    GO:1902600    hydrogen ion transmembrane transport    The directed movement of hydrogen ion (proton) across a membrane.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Chain C,F,I,L,O,R   (UCRI_RHOSH | Q02762)
molecular function
    GO:0051537    2 iron, 2 sulfur cluster binding    Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016679    oxidoreductase activity, acting on diphenols and related substances as donors    Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
    GO:0008121    ubiquinol-cytochrome-c reductase activity    Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.
biological process
    GO:1902600    hydrogen ion transmembrane transport    The directed movement of hydrogen ion (proton) across a membrane.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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  Cis Peptide Bonds
    Ala A:123 - Pro A:124   [ RasMol ]  
    Ala D:123 - Pro D:124   [ RasMol ]  
    Ala G:123 - Pro G:124   [ RasMol ]  
    Ala J:123 - Pro J:124   [ RasMol ]  
    Ala M:123 - Pro M:124   [ RasMol ]  
    Ala P:123 - Pro P:124   [ RasMol ]  
    Gly B:112 - Pro B:113   [ RasMol ]  
    Gly E:112 - Pro E:113   [ RasMol ]  
    Gly H:112 - Pro H:113   [ RasMol ]  
    Gly K:112 - Pro K:113   [ RasMol ]  
    Gly N:112 - Pro N:113   [ RasMol ]  
    Gly Q:112 - Pro Q:113   [ RasMol ]  
    Phe A:387 - Pro A:388   [ RasMol ]  
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CY1_RHOSH | Q027602fyn 2qjp 2qjy 5kkz 5kli
        CYB_RHOSH | Q027612fyn 2qjp 2qjy 5kkz 5kli
        Q3IY11_RHOS4 | Q3IY112qjp 2qjy
        UCRI_RHOSH | Q027622fyn 2nuk 2num 2nve 2nvf 2nvg 2nwf 2qjp 2qjy 5kkz 5kli

(-) Related Entries Specified in the PDB File

1kb9 YEAST BC1
1ntk BOVINE BC1 WITH ANTIMYCIN
1zrt RHODOBACTER CAPSULATUS BC1
2fyn LOW RESOLUTION MUTANT WITHOUT ANTIMYCIN
2qjp