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(-) Description

Title :  EBOV GP IN COMPLEX WITH VARIABLE FAB DOMAINS OF IGGS C2G4 AND C13C6
 
Authors :  J. Pallesen, C. D. Murin, N. De Val, C. A. Cottrell, K. M. Hastie, H. L. Tu M. L. Fusco, A. I. Flyak, L. Zeitlin, J. E. Crowe Jr. , K. G. Andersen, E. O. Saphire, A. B. Ward
Date :  09 Jun 16  (Deposition) - 07 Sep 16  (Release) - 07 Sep 16  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  4.30
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,L,M,N,O,P,Q,T,U
Keywords :  Ebola Virus Surface Glycoprotein, Therapeutic Antibody Cocktail, Zmapp, Viral Protein-Immune System Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Pallesen, C. D. Murin, N. De Val, C. A. Cottrell, K. M. Hastie, H. L. Turner, M. L. Fusco, A. I. Flyak, L. Zeitlin, J. E. Crowe, K. G. Andersen, E. O. Saphire, A. B. Ward
Structures Of Ebola Virus Gp And Sgp In Complex With Therapeutic Antibodies.
Nat Microbiol V. 1 16128 2016
PubMed-ID: 27562261  |  Reference-DOI: 10.1038/NMICROBIOL.2016.128

(-) Compounds

Molecule 1 - EBOLA SURFACE GLYCOPROTEIN, GP1
    Chains: A, E, F
    Engineered: YES
    Expression System: DROSOPHILA MELANOGASTER
    Expression System Common: FRUIT FLY
    Expression System Taxid: 7227
    Gene: GP
    Organism Common: ZEBOV
    Organism Scientific: ZAIRE EBOLAVIRUS (STRAIN MAYINGA-76)
    Organism Taxid: 128952
    Strain: MAYINGA-76
 
Molecule 2 - EBOLA SURFACE GLYCOPROTEIN, GP2
    Chains: B, G, I
    Engineered: YES
    Expression System: DROSOPHILA MELANOGASTER
    Expression System Common: FRUIT FLY
    Expression System Taxid: 7227
    Gene: GP
    Organism Common: ZEBOV
    Organism Scientific: ZAIRE EBOLAVIRUS
    Organism Taxid: 128952
    Strain: MAYINGA-76
 
Molecule 3 - C2G4 VARIABLE FAB DOMAIN HEAVY CHAIN
    Chains: H, P, Q
    Engineered: YES
    Expression System: NICOTIANA BENTHAMIANA
    Expression System Taxid: 4100
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 4 - C2G4 VARIABLE FAB DOMAIN LIGHT CHAIN
    Chains: L, T, U
    Engineered: YES
    Expression System: NICOTIANA BENTHAMIANA
    Expression System Taxid: 4100
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 5 - C13C6 VARIABLE FAB DOMAIN HEAVY CHAIN
    Chains: C, J, M
    Engineered: YES
    Expression System: NICOTIANA BENTHAMIANA
    Expression System Taxid: 4100
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 6 - C13C6 VARIABLE FAB DOMAIN LIGHT CHAIN
    Chains: D, N, O
    Engineered: YES
    Expression System: NICOTIANA BENTHAMIANA
    Expression System Taxid: 4100
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  123456789101112131415161718
Asymmetric/Biological Unit : ABCDEFGHIJLMNOPQTU

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 45)

Asymmetric/Biological Unit (3, 45)
No.NameCountTypeFull Name
1BMA9Ligand/IonBETA-D-MANNOSE
2MAN9Ligand/IonALPHA-D-MANNOSE
3NAG27Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:228 , GLU A:229binding site for Poly-Saccharide residues NAG A 601 through NAG A 602 bound to ASN A 228
02AC2SOFTWAREASN A:238binding site for Mono-Saccharide NAG A 603 bound to ASN A 238
03AC3SOFTWAREASN A:257binding site for Poly-Saccharide residues NAG A 607 through MAN A 610 bound to ASN A 257
04AC4SOFTWAREASN A:268 , GLY D:30binding site for Poly-Saccharide residues NAG A 604 through BMA A 606 bound to ASN A 268
05AC5SOFTWAREGLU A:156 , ALA B:507 , GLN B:508 , PRO B:509 , ASN B:563 , LEU G:529binding site for Poly-Saccharide residues NAG B 701 through MAN B 705 bound to ASN B 563
06AC6SOFTWAREASN E:228 , GLU E:229binding site for Poly-Saccharide residues NAG E 601 through NAG E 602 bound to ASN E 228
07AC7SOFTWAREASN E:238binding site for Mono-Saccharide NAG E 603 bound to ASN E 238
08AC8SOFTWAREASN E:257binding site for Poly-Saccharide residues NAG E 607 through MAN E 610 bound to ASN E 257
09AC9SOFTWAREASN E:268 , GLY N:30binding site for Poly-Saccharide residues NAG E 604 through BMA E 606 bound to ASN E 268
10AD1SOFTWAREASN F:228 , GLU F:229binding site for Poly-Saccharide residues NAG F 601 through NAG F 602 bound to ASN F 228
11AD2SOFTWAREASN F:238binding site for Mono-Saccharide NAG F 603 bound to ASN F 238
12AD3SOFTWAREASN F:257binding site for Poly-Saccharide residues NAG F 607 through MAN F 610 bound to ASN F 257
13AD4SOFTWAREASN F:268 , GLY O:30binding site for Poly-Saccharide residues NAG F 604 through BMA F 606 bound to ASN F 268
14AD5SOFTWAREGLU E:156 , ALA G:507 , GLN G:508 , PRO G:509 , ASN G:563 , LEU I:529binding site for Poly-Saccharide residues NAG G 701 through MAN G 705 bound to ASN G 563
15AD6SOFTWARELEU B:529 , GLU F:156 , ALA I:507 , GLN I:508 , PRO I:509 , ASN I:563binding site for Poly-Saccharide residues NAG I 701 through MAN I 705 bound to ASN I 563

(-) SS Bonds  (27, 27)

Asymmetric/Biological Unit
No.Residues
1A:53 -B:609
2A:108 -A:135
3A:121 -A:147
4B:511 -B:556
5B:601 -B:608
6C:22 -C:92
7D:23 -D:88
8E:53 -G:609
9E:108 -E:135
10E:121 -E:147
11F:53 -I:609
12F:108 -F:135
13F:121 -F:147
14G:511 -G:556
15G:601 -G:608
16H:22 -H:92
17I:511 -I:556
18I:601 -I:608
19J:22 -J:92
20L:23 -L:88
21M:22 -M:92
22N:23 -N:88
23O:23 -O:88
24P:22 -P:92
25Q:22 -Q:92
26T:23 -T:88
27U:23 -U:88

(-) Cis Peptide Bonds  (15, 15)

Asymmetric/Biological Unit
No.Residues
1Ser L:7 -Pro L:8
2Thr L:94 -Pro L:95
3Met C:100D-Gly C:101
4Ser D:7 -Pro D:8
5Tyr D:94 -Pro D:95
6Ser T:7 -Pro T:8
7Thr T:94 -Pro T:95
8Met J:100D-Gly J:101
9Ser N:7 -Pro N:8
10Tyr N:94 -Pro N:95
11Ser U:7 -Pro U:8
12Thr U:94 -Pro U:95
13Met M:100D-Gly M:101
14Ser O:7 -Pro O:8
15Tyr O:94 -Pro O:95

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5KEL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5KEL)

(-) Exons   (0, 0)

(no "Exon" information available for 5KEL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:235
                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.............hhh.ee..eee.hhhh...hhhhhhhh..........eee........eeeee.........................eeeeeeee..............eeee..eee.....eeeeeeeee..ee...hhhhhh...eeeee.......eeeeee..eee.......hhhhhhhhhhhh............................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5kel A   33 IPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNRKIRSEELSF  308
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182    || 213       223       233       243       253       263       273    || 303     
                                                                                                                                                                                    187|                                                                  278|         
                                                                                                                                                                                     209                                                                   299         


Chain B from PDB  Type:PROTEIN  Length:113
                                                                                                                                                  
               SCOP domains ----------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeee.......hhhhhh...........eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                5kel B  503 AIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDW  615
                                   512       522       532       542       552       562       572       582       592       602       612   


Chain C from PDB  Type:PROTEIN  Length:121
                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.......eeeeeeeee..........eeeeeeehhhh..eeeeeee...eeeehhhhhh.eeeeeehhh.eeeeeeeeehhhhheeeeeee...........ee...eee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                5kel C    1 DVKLLESGGGLVQPGGSLKLSCAASGFSLSTSGVGVGWFRQPSGKGLEWLALIWWDDDKYYNPSLKSQLSISKDFSRNQVFLKISNVDIADTATYYCARRDPFGYDNAMGYWGQGTSVTVS  112
                                    10        20        30     || 38        48        58        68        78    ||| 85        95     ||101       111 
                                                             35A|                                             82A||               100A|||            
                                                              35B                                              82B|                100B||            
                                                                                                                82C                 100C|            
                                                                                                                                     100D            


Chain D from PDB  Type:PROTEIN  Length:107
                                                                                                                                            
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeee....eeeeee...hhhhh.eeeeee......ee....eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                5kel D    1 DIVMTQSPLSLSTSVGDRVSLTCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGAGTKLELR  107
                                    10        20        30        40        50        60        70        80        90       100       


Chain E from PDB  Type:PROTEIN  Length:235
                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.............hhh.ee..eee.hhhh...hhhhhhhh..........eee........eeeee.........................eeeeeeee..............eeee..eee.....eeeeeeeee..ee...hhhhhh...eeeee.......eeeeee..eee.......hhhhhhhhhhhh............................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5kel E   33 IPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNRKIRSEELSF  308
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182    || 213       223       233       243       253       263       273    || 303     
                                                                                                                                                                                    187|                                                                  278|         
                                                                                                                                                                                     209                                                                   299         


Chain F from PDB  Type:PROTEIN  Length:235
                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.............hhh.ee..eee.hhhh...hhhhhhhh..........eee........eeeee.........................eeeeeeee..............eeee..eee.....eeeeeeeee..ee...hhhhhh...eeeee.......eeeeee..eee.......hhhhhhhhhhhh............................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5kel F   33 IPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNRKIRSEELSF  308
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182    || 213       223       233       243       253       263       273    || 303     
                                                                                                                                                                                    187|                                                                  278|         
                                                                                                                                                                                     209                                                                   299         


Chain G from PDB  Type:PROTEIN  Length:113
                                                                                                                                                  
               SCOP domains ----------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeee.......hhhhhh...........eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                5kel G  503 AIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDW  615
                                   512       522       532       542       552       562       572       582       592       602       612   


Chain H from PDB  Type:PROTEIN  Length:120
                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eee..eee...eee..eee....hhhhh.eeeeeee...eeeeeeee.hhhhh..eee..........eee....eee..eeee......eeeeee.....hhhhee...eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                5kel H    1 EVQLQESGGGLMQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKRSVYLQMNTLRAEDTGIYYCTRGNGNYRAMDYWGQGTSVTVS  112
                                    10        20        30        40        50  |||   57        67        77     |||84        94      |102       112
                                                                              52A||                            82A||               100A|            
                                                                               52B|                             82B|                100B            
                                                                                52C                              82C                                


Chain I from PDB  Type:PROTEIN  Length:113
                                                                                                                                                  
               SCOP domains ----------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeee.......hhhhhh...........eeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                5kel I  503 AIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDW  615
                                   512       522       532       542       552       562       572       582       592       602       612   


Chain J from PDB  Type:PROTEIN  Length:121
                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.......eeeeeeeee..........eeeeeeehhhh..eeeeeee...eeeehhhhhh.eeeeeehhh.eeeeeeeeehhhhheeeeeee...........ee...eee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                5kel J    1 DVKLLESGGGLVQPGGSLKLSCAASGFSLSTSGVGVGWFRQPSGKGLEWLALIWWDDDKYYNPSLKSQLSISKDFSRNQVFLKISNVDIADTATYYCARRDPFGYDNAMGYWGQGTSVTVS  112
                                    10        20        30     || 38        48        58        68        78    ||| 85        95     ||101       111 
                                                             35A|                                             82A||               100A|||            
                                                              35B                                              82B|                100B||            
                                                                                                                82C                 100C|            
                                                                                                                                     100D            


Chain L from PDB  Type:PROTEIN  Length:107
                                                                                                                                            
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee........eeeee......eeee.............eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                5kel L    1 DIQMTQSPASLSVSVGETVSITCRASENIYSSLAWYQQKQGKSPQLLVYSATILADGVPSRFSGSGSGTQYSLKINSLQSEDFGTYYCQHFWGTPYTFGGGTKLEIK  107
                                    10        20        30        40        50        60        70        80        90       100       


Chain M from PDB  Type:PROTEIN  Length:121
                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.......eeeeeeeee..........eeeeeeehhhh..eeeeeee...eeeehhhhhh.eeeeeehhh.eeeeeeeeehhhhheeeeeee...........ee...eee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                5kel M    1 DVKLLESGGGLVQPGGSLKLSCAASGFSLSTSGVGVGWFRQPSGKGLEWLALIWWDDDKYYNPSLKSQLSISKDFSRNQVFLKISNVDIADTATYYCARRDPFGYDNAMGYWGQGTSVTVS  112
                                    10        20        30     || 38        48        58        68        78    ||| 85        95     ||101       111 
                                                             35A|                                             82A||               100A|||            
                                                              35B                                              82B|                100B||            
                                                                                                                82C                 100C|            
                                                                                                                                     100D            


Chain N from PDB  Type:PROTEIN  Length:107
                                                                                                                                            
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeee....eeeeee...hhhhh.eeeeee......ee....eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                5kel N    1 DIVMTQSPLSLSTSVGDRVSLTCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGAGTKLELR  107
                                    10        20        30        40        50        60        70        80        90       100       


Chain O from PDB  Type:PROTEIN  Length:107
                                                                                                                                            
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeee....eeeeee...hhhhh.eeeeee......ee....eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                5kel O    1 DIVMTQSPLSLSTSVGDRVSLTCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGAGTKLELR  107
                                    10        20        30        40        50        60        70        80        90       100       


Chain P from PDB  Type:PROTEIN  Length:120
                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eee..eee...eee..eee....hhhhh.eeeeeee...eeeeeeee.hhhhh..eee..........eee....eee..eeee......eeeeee.....hhhhee...eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                5kel P    1 EVQLQESGGGLMQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKRSVYLQMNTLRAEDTGIYYCTRGNGNYRAMDYWGQGTSVTVS  112
                                    10        20        30        40        50  |||   57        67        77     |||84        94      |102       112
                                                                              52A||                            82A||               100A|            
                                                                               52B|                             82B|                100B            
                                                                                52C                              82C                                


Chain Q from PDB  Type:PROTEIN  Length:120
                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eee..eee...eee..eee....hhhhh.eeeeeee...eeeeeeee.hhhhh..eee..........eee....eee..eeee......eeeeee.....hhhhee...eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                5kel Q    1 EVQLQESGGGLMQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKRSVYLQMNTLRAEDTGIYYCTRGNGNYRAMDYWGQGTSVTVS  112
                                    10        20        30        40        50  |||   57        67        77     |||84        94      |102       112
                                                                              52A||                            82A||               100A|            
                                                                               52B|                             82B|                100B            
                                                                                52C                              82C                                


Chain T from PDB  Type:PROTEIN  Length:107
                                                                                                                                            
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee........eeeee......eeee.............eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                5kel T    1 DIQMTQSPASLSVSVGETVSITCRASENIYSSLAWYQQKQGKSPQLLVYSATILADGVPSRFSGSGSGTQYSLKINSLQSEDFGTYYCQHFWGTPYTFGGGTKLEIK  107
                                    10        20        30        40        50        60        70        80        90       100       


Chain U from PDB  Type:PROTEIN  Length:107
                                                                                                                                            
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee........eeeee......eeee.............eeeeee..eeeeee...hhhhh.eeeeee......ee...eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                5kel U    1 DIQMTQSPASLSVSVGETVSITCRASENIYSSLAWYQQKQGKSPQLLVYSATILADGVPSRFSGSGSGTQYSLKINSLQSEDFGTYYCQHFWGTPYTFGGGTKLEIK  107
                                    10        20        30        40        50        60        70        80        90       100
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 Related Entries

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UniProtKB/Swiss-Prot
        VGP_EBOZM | Q05320: 2ebo 2rlj 3csy 5fhc 5hj3 5jq3 5jq7 5jqb 5kem 5ken

(-) Related Entries Specified in the PDB File

5kem 5ken