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(-) Description

Title :  CRYSTAL STRUCTURE OF E36-G37DEL MUTANT OF THE BACILLUS CALDOLYTICUS COLD SHOCK PROTEIN.
 
Authors :  A. Carvajal, V. Castro-Fernandez, D. Cabrejos, M. Fuentealba, H. M. Pe G. Vallejos, R. Cabrera, R. C. Garratt, E. A. Komives, C. A. Ramirez-Sa J. Babul
Date :  12 May 16  (Deposition) - 10 May 17  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Bccsp, Monomer, Mutant, Cold Shock Protein. , Dna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. I. Carvajal, G. Vallejos, E. A. Komives, V. Castro-Fernandez, D. A. Leonardo, R. C. Garratt, C. A. Ramirez-Sarmiento, J. Babul
Unusual Dimerization Of A Bccsp Mutant Leads To Reduced Conformational Dynamics.
Febs J. V. 284 1882 2017
PubMed-ID: 28457014  |  Reference-DOI: 10.1111/FEBS.14093

(-) Compounds

Molecule 1 - COLD SHOCK PROTEIN CSPB
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28B MODIFIED
    Expression System Strain: BL21(DE3)C41
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CSPB
    Mutation: YES
    Organism Scientific: BACILLUS CALDOLYTICUS
    Organism Taxid: 1394

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric/Biological Unit (1, 5)
No.NameCountTypeFull Name
1SO45Ligand/IonSULFATE ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:35 , PHE A:36 , LYS A:37 , LYS A:63 , HOH A:245 , HOH A:247 , GLY B:-1binding site for residue SO4 A 101
2AC2SOFTWAREHOH A:223 , HOH A:249 , HOH A:275 , GLY B:-1 , HIS B:0 , HOH B:239 , HOH B:244binding site for residue SO4 A 102
3AC3SOFTWAREHIS A:0 , GLY B:35 , PHE B:36 , LYS B:37 , LYS B:63 , HOH B:235 , HOH B:249 , HOH B:260 , HOH B:263binding site for residue SO4 B 101
4AC4SOFTWARELYS B:37 , HOH B:211binding site for residue SO4 B 102
5AC5SOFTWAREHOH B:219 , HOH B:233 , HOH B:276binding site for residue SO4 B 103

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5JX4)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5JX4)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JX4)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 5JX4)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:65
                                                                                                
               SCOP domains ----------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee....eeeee......eeee.hhh..........eeeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                  5jx4 A  0 HMQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGFKTLEEGQEVSFEIVQGNRGPQAANVVKL 64
                                     9        19        29        39        49        59     


Chain B from PDB  Type:PROTEIN  Length:66
                                                                                                 
               SCOP domains ------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeee....eeeee......eeee.hhh..........eeeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------ Transcript
                  5jx4 B -1 GHMQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGFKTLEEGQEVSFEIVQGNRGPQAANVVKL 64
                                     8        18        28        38        48        58
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JX4)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JX4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JX4)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CSPB_BACCL | P41016: 1c9o 1hz9 1hza 1hzb 1hzc 1i5f 2hax

(-) Related Entries Specified in the PDB File

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