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(-) Description

Title :  FABP4_3 IN COMPLEX WITH 6,8-DICHLORO-4-PHENYL-2-PIPERIDIN-1-YL-QUINOLINE-3-CARBOXYLIC ACID
 
Authors :  A. Ehler, M. G. Rudolph
Date :  02 Feb 16  (Deposition) - 14 Dec 16  (Release) - 08 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.12
Chains :  Asym./Biol. Unit :  A
Keywords :  Lipid Binding Protein, Fatty Acid Binding Protein, Cytoplasm, Lipid- Binding, Transport Protein, Protein Binding, _refmac (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Kuhne, U. Obst-Sander, B. Kuhn, A. Conte, S. M. Ceccarelli, W. Neidhart, M. G. Rudolph, G. Ottaviani, R. Gasser, S. S. So, S. Li, X. Zhang, L. Gao, M. Myers
Design And Synthesis Of Selective, Dual Fatty Acid Binding Protein 4 And 5 Inhibitors.
Bioorg. Med. Chem. Lett. V. 26 5092 2016
PubMed-ID: 27658368  |  Reference-DOI: 10.1016/J.BMCL.2016.08.071

(-) Compounds

Molecule 1 - FATTY ACID-BINDING PROTEIN, ADIPOCYTE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: SOLUBLE FORM, RESIDUES 3-132
    Gene: FABP4
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ADIPOCYTE LIPID-BINDING PROTEIN,ALBP,ADIPOCYTE-TYPE FATTY ACID-BINDING PROTEIN,AFABP,FATTY ACID-BINDING PROTEIN 4

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 5)

Asymmetric/Biological Unit (2, 5)
No.NameCountTypeFull Name
165Z1Ligand/Ion6,8-DICHLORO-4-PHENYL-2-(PIPERIDIN-1-YL)QUINOLINE-3-CARBOXYLIC ACID
2DMS4Ligand/IonDIMETHYL SULFOXIDE

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:24 , THR A:30 , ALA A:34 , SER A:56 , ALA A:76 , ARG A:79 , ARG A:107 , LEU A:116 , LEU A:118 , ARG A:127 , TYR A:129 , HOH A:308 , HOH A:367 , HOH A:406 , HOH A:418binding site for residue 65Z A 200
2AC2SOFTWARETHR A:41 , ARG A:107 , LEU A:116 , TYR A:129 , HOH A:410binding site for residue DMS A 201
3AC3SOFTWARESER A:102 , THR A:103 , THR A:104 , VAL A:119binding site for residue DMS A 202
4AC4SOFTWAREVAL A:26 , GLY A:27 , ASP A:77 , HOH A:307binding site for residue DMS A 203
5AC5SOFTWAREGLY A:47 , ASP A:48 , HOH A:304binding site for residue DMS A 204

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5HZ8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5HZ8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5HZ8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5HZ8)

(-) Exons   (0, 0)

(no "Exon" information available for 5HZ8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:135
                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhheeeeeeeeehhhhhhhhh..hhhhhhhhhhh..eeeeeee..eeeeeee.....eeeeee....eeee.....eeeeeeeee..eeeeeeee..eeeeeeeeee..eeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hz8 A  -2 GSHMCDAFVGTWKLVSSENFDDYMKELGVGFATRKVAGMAKPNTIISVNGDVITLKTESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTLKRKREDDKLVLELVMKGVTCTRVYERA 132
                                     7        17        27        37        47        57        67        77        87        97       107       117       127
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5HZ8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5HZ8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5HZ8)

(-) Gene Ontology  (19, 19)

Asymmetric/Biological Unit(hide GO term definitions)

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  5hz8
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FABP4_HUMAN | P15090: 1tou 1tow 2hnx 2nnq 3fr2 3fr4 3fr5 3p6c 3p6d 3p6e 3p6f 3p6g 3p6h 3q6l 3rzy 4nns 4nnt 5d45 5d47 5d48 5d4a 5edb 5edc 5hz6

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5HZ8)