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(-) Description

Title :  CRYSTAL STRUCTURE OF THE PALMITOYLATED HUMAN TEAD2 TRANSCRIPTION FACTOR
 
Authors :  C. L. Noland, S. Gierke, P. D. Schnier, J. Murray, W. N. Sandoval, M. Sago A. Dey, R. N. Hannoush, W. J. Fairbrother, C. N. Cunningham
Date :  06 Nov 15  (Deposition) - 23 Dec 15  (Release) - 20 Jan 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Palmitoylated Protein, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. L. Noland, S. Gierke, P. D. Schnier, J. Murray, W. N. Sandoval, M. Sagolla, A. Dey, R. N. Hannoush, W. J. Fairbrother, C. N. Cunningham
Palmitoylation Of Tead Transcription Factors Is Required Fo Their Stability And Function In Hippo Pathway Signaling.
Structure V. 24 179 2016
PubMed-ID: 26724994  |  Reference-DOI: 10.1016/J.STR.2015.11.005

(-) Compounds

Molecule 1 - TRANSCRIPTIONAL ENHANCER FACTOR TEF-4
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: YAP BINDING DOMAIN, UNP RESIDUES 219-435
    Gene: TEAD2, TEF4
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: TEA DOMAIN FAMILY MEMBER 2,TEAD-2

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1P1L2Mod. Amino AcidS-PALMITOYL-L-CYSTEINE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1P1L1Mod. Amino AcidS-PALMITOYL-L-CYSTEINE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1P1L1Mod. Amino AcidS-PALMITOYL-L-CYSTEINE

(-) Sites  (0, 0)

(no "Site" information available for 5EMV)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5EMV)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Gly A:292 -Pro A:293
2Lys B:281 -Lys B:282
3Gly B:292 -Pro B:293

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EMV)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5EMV)

(-) Exons   (0, 0)

(no "Exon" information available for 5EMV)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:194
                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeeee...eeeeeee...eee.hhhhhhh.....hhhhhhhhhhhh.eeeeeeeee.....eeeeeeeeee....eeeeeeeeee..eeeeeeeeeee.eee..eeeeeeeeee.hhhhhhhhhhhh...hhhhhhhhhh.eeeeeeeee.....eeeeeeeeeeee......eeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5emv A 222 GLGTARLQLVEFSAFVEPQRHLFVHISQLESVDVRQIYDKFPEKKGGLRELYDRGPPHAFFLVKFWADLNWGGFYGVSSQYESLEHMTLTCSSKVCSFGKQVVEKVETERAQLEDGRFVYRLLRSPMcEYLVNFLHKLRQLPERYMMNSVLENFTILQVVTNRDTQELLLCTAYVFEVSTSERGAQHHIYRLVR 446
                                   231       248       267       277       287       297       307||     332       342       352       362       372       382       392       402       412       422       432       442    
                                           239|      256|                                       308|                                                     380-P1L                                                              
                                            247       266                                        324                                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:204
                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........eeeeeeeeeehhhhhh....eeeeeee.....eee.hhhhhhh.....hhhhhhhhhhhh.eeeeeeee.....eeeeeeeeee....eeeeeeeeee..eeeeeeeeeee.eee..eeeeeeeeee.hhhhhhhhhhhhh..hhhhhhhhhh.eeeeeeeee.....eeeeeeeeeee.....eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5emv B 218 WQARGLGTARLQLVEFSAFVEPPDAVDSYQRHLFVHISQPPLESVDVRQIYDKFPEKKGGLRELYDRGPPHAFFLVKFWADLNWGFYGVSSQYESLEHMTLTCSSKVCSFGKQVVEKVETERAQLEDGRFVYRLLRSPMcEYLVNFLHKLRQLPERYMMNSVLENFTILQVVTNRDTQELLLCTAYVFEVSERGAQHHIYRLVR 446
                                   227       237       247       264       274       284       294       304   ||  330       340       350       360       370       380       390       400       410       420       430||     442    
                                                                256|                                         308|                                                    380-P1L                                            431|            
                                                                 264                                          325                                                                                                        434
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5EMV)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5EMV)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5EMV)

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)

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  Cis Peptide Bonds
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  TEAD2_HUMAN | Q15562
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TEAD2_HUMAN | Q15562: 3l15 5dq8 5dqe 5hgu

(-) Related Entries Specified in the PDB File

5emw