Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  BACTERIAL CELLULOSE SYNTHASE BOUND TO A SUBSTRATE ANALOGUE
 
Authors :  J. T. Mcnamara, J. Zimmer
Date :  30 Oct 15  (Deposition) - 09 Mar 16  (Release) - 30 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.95
Chains :  Asym. Unit :  A,B,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B,D  (1x)
Keywords :  Cellulose Biosynthesis, Metal Binding Protein, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. L. Morgan, J. T. Mcnamara, M. Fischer, J. Rich, H. M. Chen, S. G. Withers, J. Zimmer
Observing Cellulose Biosynthesis And Membrane Translocation In Crystallo.
Nature V. 531 329 2016
PubMed-ID: 26958837  |  Reference-DOI: 10.1038/NATURE16966

(-) Compounds

Molecule 1 - PUTATIVE CELLULOSE SYNTHASE
    ChainsA
    EC Number2.4.1.12
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneRSP_0333
    Organism ScientificRHODOBACTER SPHAEROIDES (STRAIN ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
    Organism Taxid272943
    StrainATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158
 
Molecule 2 - PUTATIVE CELLULOSE SYNTHASE
    ChainsB
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneRSP_0332
    Organism ScientificRHODOBACTER SPHAEROIDES
    Organism Taxid272943
    StrainATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158
 
Molecule 3 - POLY(UNK)
    ChainsD
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism ScientificRHODOBACTER SPHAEROIDES
    Organism Taxid1063

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit ABD
Biological Unit 1 (1x)A  
Biological Unit 2 (1x) BD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (9, 35)

Asymmetric Unit (9, 35)
No.NameCountTypeFull Name
143Y1Ligand/Ion[(2R)-3-[OXIDANYL-[2-(TRIMETHYL-$L^{4}-AZANYL)ETHOXY]PHOSPHORYL]OXY-2-PROPANOYLOXY-PROPYL]PROPANOATE
26601Ligand/Ion[[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-BIS(OXIDANYLIDENE)PYRIMIDIN-1-YL]-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]OXY-[[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(HYDROXYMETHYL)-3,4,5-TRIS(OXIDANYL)OXAN-2-YL]METHYL]PHOSPHINIC ACID
3BGC16Ligand/IonBETA-D-GLUCOSE
4C2E2Ligand/Ion9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D:3',2'-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-1,9-DIHYDRO-6H-PURIN-6-ONE)
5GAL1Ligand/IonBETA-D-GALACTOSE
6LDA2Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
7MG2Ligand/IonMAGNESIUM ION
8PLC1Ligand/IonDIUNDECYL PHOSPHATIDYL CHOLINE
9UNK9Mod. Amino Acid
Biological Unit 1 (7, 24)
No.NameCountTypeFull Name
143Y1Ligand/Ion[(2R)-3-[OXIDANYL-[2-(TRIMETHYL-$L^{4}-AZANYL)ETHOXY]PHOSPHORYL]OXY-2-PROPANOYLOXY-PROPYL]PROPANOATE
26601Ligand/Ion[[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-BIS(OXIDANYLIDENE)PYRIMIDIN-1-YL]-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]OXY-[[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(HYDROXYMETHYL)-3,4,5-TRIS(OXIDANYL)OXAN-2-YL]METHYL]PHOSPHINIC ACID
3BGC16Ligand/IonBETA-D-GLUCOSE
4C2E2Ligand/Ion9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D:3',2'-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-1,9-DIHYDRO-6H-PURIN-6-ONE)
5GAL1Ligand/IonBETA-D-GALACTOSE
6LDA2Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
7MG-1Ligand/IonMAGNESIUM ION
8PLC1Ligand/IonDIUNDECYL PHOSPHATIDYL CHOLINE
9UNK-1Mod. Amino Acid
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
143Y-1Ligand/Ion[(2R)-3-[OXIDANYL-[2-(TRIMETHYL-$L^{4}-AZANYL)ETHOXY]PHOSPHORYL]OXY-2-PROPANOYLOXY-PROPYL]PROPANOATE
2660-1Ligand/Ion[[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-BIS(OXIDANYLIDENE)PYRIMIDIN-1-YL]-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]OXY-[[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(HYDROXYMETHYL)-3,4,5-TRIS(OXIDANYL)OXAN-2-YL]METHYL]PHOSPHINIC ACID
3BGC-1Ligand/IonBETA-D-GLUCOSE
4C2E-1Ligand/Ion9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D:3',2'-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-1,9-DIHYDRO-6H-PURIN-6-ONE)
5GAL-1Ligand/IonBETA-D-GALACTOSE
6LDA-1Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
7MG-1Ligand/IonMAGNESIUM ION
8PLC-1Ligand/IonDIUNDECYL PHOSPHATIDYL CHOLINE
9UNK-1Mod. Amino Acid

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREPHE A:435 , GLY A:437 , ARG A:541 , PHE A:545 , ASP A:548 , BGC A:908binding site for residue PLC A 901
02AC2SOFTWAREALA A:54 , LYS A:57 , GLY A:708 , LEU A:709 , LEU A:710binding site for residue 43Y A 902
03AC3SOFTWAREARG A:579 , ARG A:580 , ALA A:581 , ARG A:584 , ASP A:609 , SER A:611 , SER A:613 , GLY A:614 , VAL A:615 , ARG A:616 , ARG A:658 , GLY A:670 , VAL A:671 , ILE A:672 , C2E A:921binding site for residue C2E A 920
04AC4SOFTWAREGLN A:578 , ARG A:579 , ARG A:580 , ARG A:584 , ARG A:616 , ARG A:658 , C2E A:920binding site for residue C2E A 921
05AC5SOFTWARETRP A:542binding site for residue LDA A 922
06AC6SOFTWARETRP A:718binding site for residue LDA A 923
07AC7SOFTWAREHIS A:249 , 660 A:925binding site for residue MG A 924
08AC8SOFTWAREPRO A:147 , SER A:148 , TYR A:149 , GLU A:151 , ASP A:180 , ALA A:225 , LYS A:226 , ASN A:229 , ASP A:246 , ALA A:247 , HIS A:249 , CYS A:318 , GLY A:319 , SER A:320 , ASP A:343 , GLN A:379 , ARG A:382 , TRP A:383 , PHE A:503 , VAL A:505 , THR A:506 , LYS A:508 , GAL A:919 , MG A:924binding site for residue 660 A 925
09AC9SOFTWAREGLY B:231 , LEU B:234 , GLU B:237 , ALA B:487 , ALA B:488binding site for residue MG B 801
10AD1SOFTWARETYR A:80 , GLU A:108 , SER A:111 , ILE A:114 , PHE A:115 , ASN A:118 , MET A:300 , PHE A:301 , TYR A:302 , ILE A:305 , CYS A:318 , THR A:341 , ASP A:343 , MET A:387 , ASN A:412 , SER A:413 , PHE A:416 , TRP A:417 , ARG A:423 , PHE A:426 , ALA A:429 , PRO A:430 , TYR A:433 , GLY A:437 , ILE A:438 , GLU A:439 , PHE A:441 , ALA A:443 , MET A:452 , TYR A:455 , ARG A:471 , GLU A:477 , GLU A:480 , GLY A:547 , ASP A:548 , VAL A:551 , VAL A:554 , VAL A:555 , TRP A:558 , PLC A:901 , 660 A:925 , ARG B:384 , MET B:385 , LEU B:386 , PRO B:387 , ARG B:390 , LEU B:399 , VAL B:566 , SER B:568binding site for Poly-Saccharide residues BGC A 903 through GAL A 919
11AD2SOFTWARETYR A:80 , GLU A:108 , SER A:111 , ILE A:114 , PHE A:115 , ASN A:118 , LEU A:139 , TYR A:168 , ARG A:171 , LEU A:172 , ARG A:173 , MET A:300 , PHE A:301 , TYR A:302 , ILE A:305 , CYS A:318 , THR A:341 , ASP A:343 , MET A:387 , ASN A:412 , SER A:413 , PHE A:416 , TRP A:417 , ARG A:423 , PHE A:426 , ALA A:429 , PRO A:430 , TYR A:433 , GLY A:437 , ILE A:438 , GLU A:439 , PHE A:441 , ALA A:443 , MET A:452 , TYR A:455 , ARG A:471 , GLU A:477 , GLU A:480 , GLY A:547 , ASP A:548 , VAL A:551 , VAL A:554 , VAL A:555 , TRP A:558 , PLC A:901 , BGC A:903 , 660 A:925 , ARG B:384 , MET B:385 , LEU B:386 , PRO B:387 , ARG B:390 , LEU B:399 , VAL B:566 , SER B:568binding site for residues UNK D 169 and UNK D 170

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1B:163 -B:430

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Ser A:189 -Pro A:190
2Pro A:192 -Glu A:193
3Asp A:626 -Pro A:627
4Gly B:141 -Glu B:142
5Gly B:252 -Pro B:253
6Asn B:424 -Pro B:425

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EIY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5EIY)

(-) Exons   (0, 0)

(no "Exon" information available for 5EIY)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:728
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...................eeeeeee...hhhhhhhhhhhhhh...hhh.eeeeeee...hhhhhhh...hhhhhhhhhhhhhhhhhhhhh.eeee.......hhhhhhhhhhhh...eeee.....ee........hhhhhh...eeeee...ee...hhhhhhhh........hhhhhhhhhhhhhhh.........eeeehhhhhh.........hhhhhhhhhhhhhh.eeee.....eee....hhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh..................ee...hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh...ee.........eeeeeeeeeehhhhh...eeeeeeee...eeeeeee..............eeeeeee....hhhhh..eeeeeeeeeee..eeeeeeee....hhhhhhhhhhhhhh.hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5eiy A  13 VVPVLLFLLWVALLVPFGLLAAAPVAPSAQGLIALSAVVLVALLKPFADKMVPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNPLFRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSENYISPIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAPRVQMEVPAEAQIPAFGNRSLTATVLDASTSGVRLLVRLPGVGDPHPALEAGGLIQFQPKFPDAPQLERMVRGRIRSARREGGTVMVGVIFEAGQPIAVRETVAYLIFGESAHWRTMREATMRPIGLLHGMARILWMAAASLPKTARDFMDEPARRRR 740
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732        

Chain B from PDB  Type:PROTEIN  Length:658
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.ee.........eeeee...eeeeeeeeehhhhh..eeeeeeee.........eeeeee...eeeee........eeeeee.......eeeeeeeeee.......hhhhhh..eeeeeeeeeeeee.......hhhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhh........eeee...........eeeeeee....eeeeee.....eeeeeee......hhhhhhhhhh..................ee........eee...eeeeeeeeee..........eeeeee.eee........eeeeee..eeeeeee...........eeeeee.hhh..eeeeeeeeee.................eee....eee......ee..hhhhhhhhhhhh.eee.hhhhhhhhhhhhh...........eeeeee.hhh..........hhhhhhhhhh............................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhh.....eeeeeee..eeeeee....hhhhhhhhhhhhhhh.......eeee.....eeee.......ee.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5eiy B  52 VAPWIIPLRPLAETAQVGPLFRLQGQQARAAFRLFLPTEAVGGTLTLAQRSSIDILPESSQIIVRMNDQEIGRFTPRQFGALGAVTMPLGEAVRAGDNLVTIEAQHRHRIYCGADAEFDLWTEVDLSQSGVALPAAAIGTEPTSFIAALTAQAESGRPVEIRTPTPPDEATLRTLAQALGRPLPDEALPLALSKPWSAETGPTYARITLLPSDADRVSIRRGGDGAVVLVLEHPPEGSPNASLVADLLGATPTLPPPTLPQIPPGRVVTLADMGVDTILTDNRYFNRDIDFQLPDDWLLLASQKAQIGIDYGFAGGLPEGALLLVKVNGTTVRMLPLDRDAAPVKPRLDIRFPARLLHPGPNRLSFESVIPGNPPDQPCPASAGDLMQVLSSTDLEVPPSPRMQMADMARDLAQVTPASVHPATPDGLARTLPFMAAFREVPDAAPVDLTVAGLHDIATVPLNEEGLTPRLLALTLLPSTGPPANALAPLGAAPGEGVMPPLVESNWSDRAQTFVQATLQPVIQTVRRMLRPGDGNLAEWLATRKGTAMLLAPEPGKLWVILGPEAEPARVAEALAMAPRSPGGPRGQVAVLGSDGRWSSWSKPGLLPELREPVSLDNVRSVVGNVASARPPLLLGGMLGLAWISAAIAVGFVLRTRR 721
                                    61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531|      553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         531|                                                                                                                                                                                 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          544                                                                                                                                                                                 

Chain D from PDB  Type:PROTEIN  Length:9
                                         
               SCOP domains --------- SCOP domains
               CATH domains --------- CATH domains
               Pfam domains --------- Pfam domains
         Sec.struct. author ......... Sec.struct. author
                 SAPs(SNPs) --------- SAPs(SNPs)
                    PROSITE --------- PROSITE
                 Transcript --------- Transcript
                 5eiy D 169 xxxxxxxxx 177
                            |||||||||
                          169-UNK||||
                           170-UNK|||
                            171-UNK||
                             172-UNK|
                              173-UNK
                               174-UNK
                                175-UNK
                                 176-UNK
                                  177-UNK

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5EIY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5EIY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5EIY)

(-) Gene Ontology  (11, 14)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    43Y  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    660  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    BGC  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    C2E  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GAL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    LDA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PLC  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    UNK  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    AD1  [ RasMol ]  +environment [ RasMol ]
    AD2  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Asn B:424 - Pro B:425   [ RasMol ]  
    Asp A:626 - Pro A:627   [ RasMol ]  
    Gly B:141 - Glu B:142   [ RasMol ]  
    Gly B:252 - Pro B:253   [ RasMol ]  
    Pro A:192 - Glu A:193   [ RasMol ]  
    Ser A:189 - Pro A:190   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  5eiy
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q3J125_RHOS4 | Q3J125
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/TrEMBL
  Q3J126_RHOS4 | Q3J126
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  2.4.1.12
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  Q3J125_RHOS4 | Q3J125
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  Q3J126_RHOS4 | Q3J126
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q3J125_RHOS4 | Q3J1254hg6 4p00 4p02 5ej1 5ejz
        Q3J126_RHOS4 | Q3J1264hg6 4p00 4p02 5ej1 5ejz

(-) Related Entries Specified in the PDB File

5ej1 5ejz