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(-) Description

Title :  CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN HUMAN PHOSPHATASE PRL-2 IN THE OXIDIZED STATE WITH THE BATEMAN DOMAIN OF HUMAN MAGNESIUM TRANSPORTER CNNM3
 
Authors :  I. Gulerez, G. Kozlov, K. Gehring
Date :  18 May 16  (Deposition) - 12 Oct 16  (Release) - 12 Oct 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.96
Chains :  Asym. Unit :  A,C
Biol. Unit 1:  A,C  (2x)
Biol. Unit 2:  A,C  (4x)
Keywords :  Complex, Phosphatase, Magnesium Transporter, Protein Binding, Hydrolase, Hydrolase-Transporter Protein-Protein Binding Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  I. Gulerez, Y. Funato, H. Wu, M. Yang, G. Kozlov, H. Miki, K. Gehring
Structural Basis Of Prl Phosphatase Binding To The Cnnm3 Magnesium Transporter
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROTEIN TYROSINE PHOSPHATASE TYPE IVA 2
    Chains: A
    EC Number: 3.1.3.48
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PDEST17
    Gene: PTP4A2, PRL2, PTPCAAX2, BM-008
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: HU-PP-1,OV-1,PTP(CAAXII),PROTEIN-TYROSINE PHOSPHATASE 4A2, PROTEIN-TYROSINE PHOSPHATASE OF REGENERATING LIVER 2,PRL-2
 
Molecule 2 - METAL TRANSPORTER CNNM3
    Chains: C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PDEST15
    Gene: CNNM3, ACDP3
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ANCIENT CONSERVED DOMAIN-CONTAINING PROTEIN 3,CYCLIN-M3

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AC
Biological Unit 1 (2x): AC
Biological Unit 2 (4x): AC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5K23)

(-) Sites  (0, 0)

(no "Site" information available for 5K23)

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1A:46 -A:101

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Tyr A:11 -Glu A:12
2Lys A:152 -Met A:153
3Glu C:353 -Glu C:354
4Glu C:374 -Asp C:375

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5K23)

(-) PROSITE Motifs  (0, 0)

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(-) Sequences/Alignments

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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eeee....eeeee......hhhhhhhhhhhh.eeeeee.......hhhhhh...eeee.........hhhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhh..hhhhhhhhhhhhh....hhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5k23 A   1 MNRPAPVEISYENMRFLITHNPTNATLNKFTEELKKYGVTTLVRVCDATYDKAPVEKEGIHVLDWPFDDGAPPPNQIVDDWLNLLKTKFREEPGCCVAVHCVAGLGRAPVLVALALIECGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLR 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      


Chain C from PDB  Type:PROTEIN  Length:149
                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh...hhhhhhee.hhh..ee...eehhhhhhhhhhhh..eeeee......eeeeee.hhhh.......eehhhhhh.......eee...hhhhhhhhhhh....eeeeeeee.......eeeeeeeeehhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5k23 C 298 GPLNMIQGVLELRCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNIVDMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRGKSHLAIVQKVNNEGEGDPFYEVLGLVTLEDVIEEIIR 446
                                   307       317       327       337       347       357       367       377       387       397       407       417       427       437
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5K23)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5K23)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (19, 21)

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  Cis Peptide Bonds
    Glu C:353 - Glu C:354   [ RasMol ]  
    Glu C:374 - Asp C:375   [ RasMol ]  
    Lys A:152 - Met A:153   [ RasMol ]  
    Tyr A:11 - Glu A:12   [ RasMol ]  
 
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CNNM3_HUMAN | Q8NE01: 5k22 5k25 5tsr
        TP4A2_HUMAN | Q12974: 5k22 5k25

(-) Related Entries Specified in the PDB File

5k22 5k24 5k25