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(-) Description

Title :  CRYSTAL STRUCTURE OF B. PSEUDOMALLEI FABI IN COMPLEX WITH NAD AND PT404
 
Authors :  M. W. Hirschbeck, S. Eltschkner, P. J. Tonge, C. Kisker
Date :  20 Feb 16  (Deposition) - 22 Feb 17  (Release) - 19 Apr 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (4x)
Keywords :  Enoyl-Acp Reductase, Burkholderia Pseudomallei, Diphenyl Ethers, Slow-Binding Inhibitors, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Neckles, S. Eltschkner, J. E. Cummings, M. Hirschbeck, F. Daryaee, G. R. Bommineni, Z. Zhang, L. Spagnuolo, W. Yu, S. Davoodi, R. A. Slayden, C. Kisker, P. J. Tonge
Rationalizing The Binding Kinetics For The Inhibition Of Th Burkholderia Pseudomallei Fabi1 Enoyl-Acp Reductase.
Biochemistry V. 56 1865 2017
PubMed-ID: 28225601  |  Reference-DOI: 10.1021/ACS.BIOCHEM.6B01048

(-) Compounds

Molecule 1 - ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]
    Chains: A
    EC Number: 1.3.1.9
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: FABI, FABI_2, ACT79_25590, AM256_11615, AM257_11635, AMS56_08605, DP46_2957, DP49_6839, ERS012314_03793, ERS012372_03823, SY87_14645, TR70_1075, VU09_13745
    Organism Scientific: BURKHOLDERIA PSEUDOMALLEI
    Organism Taxid: 28450

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (4x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 3)

Asymmetric Unit (3, 3)
No.NameCountTypeFull Name
19W71Ligand/Ion2-(2-CHLORO-4-NITROPHENOXY)-5-ETHYL-4-FLUOROPHENOL
2GOL1Ligand/IonGLYCEROL
3NAD1Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 1 (3, 12)
No.NameCountTypeFull Name
19W74Ligand/Ion2-(2-CHLORO-4-NITROPHENOXY)-5-ETHYL-4-FLUOROPHENOL
2GOL4Ligand/IonGLYCEROL
3NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:13 , LEU A:15 , SER A:19 , ILE A:20 , VAL A:40 , CYS A:63 , ASP A:64 , VAL A:65 , SER A:91 , ILE A:92 , GLY A:93 , LEU A:144 , SER A:145 , TYR A:146 , LYS A:163 , ALA A:189 , GLY A:190 , PRO A:191 , ILE A:192 , THR A:194 , ALA A:196 , 9W7 A:302 , HOH A:425 , HOH A:428 , HOH A:454 , HOH A:464 , HOH A:474 , HOH A:507binding site for residue NAD A 301
2AC2SOFTWAREGLY A:93 , PHE A:94 , ALA A:95 , ILE A:100 , TYR A:146 , TYR A:156 , ALA A:196 , ALA A:197 , PHE A:203 , NAD A:301binding site for residue 9W7 A 302
3AC3SOFTWAREASP A:235binding site for residue GOL A 303

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5I9L)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:257
                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.......hhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh....eee....hhhhhhhhhhhhhhhh..eeeeee.....hhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeehhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee.....hhhhh..hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.....eeee..hhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5i9l A   2 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGM 258
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5I9L)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5I9L)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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 Related Entries

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UniProtKB/TrEMBL
        A0A0H3HP34_B | A0A0H3HP34: 4bku 5i7e 5i7f 5i7s 5i7v 5i8w 5i8z 5i9m 5i9n 5ifl

(-) Related Entries Specified in the PDB File

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