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(-) Description

Title :  CRYSTAL STRUCTURE OF THE SUSCD COMPLEX BT2261-2264 FROM BACTEROIDES THETAIOTAOMICRON
 
Authors :  A. J. Glenwright, K. R. Pothula, D. S. Chorev, A. Basle, C. V. Robinson, U. Kleinekathoefer, D. N. Bolam, B. Van Den Berg
Date :  07 Dec 15  (Deposition) - 21 Dec 16  (Release) - 01 Feb 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.40
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,P
Keywords :  Membrane Protein, Sugar Binding Protein, Outer Membrane Nutrient Importer Suscd Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. J. Glenwright, K. R. Pothula, S. P. Bhamidimarri, D. S. Chorev, A. Basle, S. J. Firbank, H. Zheng, C. V. Robinson, M. Winterhalter, U. Kleinekathofer, D. N. Bolam, B. Van Den Berg
Structural Basis For Nutrient Acquisition By Dominant Members Of The Human Gut Microbiota.
Nature V. 541 407 2017
PubMed-ID: 28077872  |  Reference-DOI: 10.1038/NATURE20828

(-) Compounds

Molecule 1 - BT_2263
    Chains: A, C
    Organism Scientific: BACTEROIDES THETAIOTAOMICRON
    Organism Taxid: 818
    Other Details: OUTER MEMBRANE LIPOPROTEIN
 
Molecule 2 - BT_2264
    Chains: B, D
    Organism Scientific: BACTEROIDES THETAIOTAOMICRON
    Organism Taxid: 818
    Other Details: TONB DEPENDENT TRANSPORTER
 
Molecule 3 - BT_2261
    Chains: E, F
    Organism Scientific: BACTEROIDES THETAIOTAOMICRON
    Organism Taxid: 818
    Other Details: OUTER MEMBRANE LIPOPROTEIN
 
Molecule 4 - BT_2262
    Chains: G, H
    Organism Scientific: BACTEROIDES THETAIOTAOMICRON
    Organism Taxid: 818
    Other Details: OUTER MEMBRANE LIPOPROTEIN
 
Molecule 5 - PEPTIDE
    Chains: I, P
    Organism Scientific: BACTEROIDES THETAIOTAOMICRON
    Organism Taxid: 818

 Structural Features

(-) Chains, Units

  12345678910
Asymmetric/Biological Unit : ABCDEFGHIP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric/Biological Unit (2, 8)
No.NameCountTypeFull Name
1MG2Ligand/IonMAGNESIUM ION
2NA6Ligand/IonSODIUM ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:82 , SER B:630 , ALA B:631 , ASN B:633BINDING SITE FOR RESIDUE MG B 1985
2AC2SOFTWAREALA C:82 , GLY C:83 , SER D:630 , ALA D:631 , ASN D:633BINDING SITE FOR RESIDUE MG D 1985
3AC3SOFTWAREASP A:231 , GLU B:493BINDING SITE FOR RESIDUE NA B 1986
4AC4SOFTWAREASP B:280 , GLY B:281 , ILE B:283 , THR B:285 , ASP B:288BINDING SITE FOR RESIDUE NA B 1987
5AC5SOFTWAREASP B:850BINDING SITE FOR RESIDUE NA B 1988
6AC6SOFTWAREARG C:408 , ARG C:409 , ASP C:411 , ASP C:478 , LYS C:480BINDING SITE FOR RESIDUE NA C 1481
7AC7SOFTWAREASP D:850BINDING SITE FOR RESIDUE NA D 1986
8AC8SOFTWAREASP D:280 , GLY D:281 , ILE D:283 , THR D:285 , ASP D:288BINDING SITE FOR RESIDUE NA D 1987

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FQ7)

(-) Cis Peptide Bonds  (21, 21)

Asymmetric/Biological Unit
No.Residues
1Cys A:412 -Pro A:413
2Ser B:95 -Gly B:96
3Asp B:105 -Gly B:106
4Arg B:170 -Lys B:171
5Lys B:173 -Gly B:174
6Gly B:304 -Ala B:305
7Asn B:430 -Gly B:431
8Ser B:441 -Gly B:442
9Gln B:579 -Asp B:580
10Phe B:621 -Pro B:622
11Gly B:775 -Arg B:776
12Cys C:412 -Pro C:413
13Ser D:95 -Gly D:96
14Asp D:105 -Gly D:106
15Arg D:170 -Lys D:171
16Lys D:173 -Gly D:174
17Gly D:304 -Ala D:305
18Asn D:430 -Gly D:431
19Ser D:441 -Gly D:442
20Phe D:621 -Pro D:622
21Gly D:775 -Arg D:776

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FQ7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FQ7)

(-) Exons   (0, 0)

(no "Exon" information available for 5FQ7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:480
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee......hhhhhh...hhhhh.hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.ee......hhhhh...eehhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh......eee..........hhhhhhhhh.....eeehhhhhhhhhhh.hhhhhh.................hhhhhhhhh.....hhhhh............eeeehhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.....hhhhhh...........hhhhhhhhhhhhhhhh..hhhhhhhhhhhh........hhhhhhhhhhhh........................hhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5fq7 A   1 CDLNINDDPNYPMNDQVTADLIFPSISASIASAVGGEIYNYAGFFAQYYEQKPESNQYNTLCEYTFTESSQQMDYSYRILFAGALEDAKQVLEKTTNPADRFATTILRAYAFQIMVDNTSDSPYSEALQGNANATPKWDTGETVYKGILGEIDAAEAALDGSGMDVPDLIFNKNIAQWKGFANALRLRMYLRFIDANIDAASYTEKVKTLVQNNEFFTGDVKLDCFLDETDKRNPWYNTNAVGLTGNHCAAYPLVSYLSSTGDPRIAYGISKTDADGKYVGQLPGGKTHMQSILGTDNWKNKNVSAIDYSIGATKPVYFFTQAELQFLIAEVYARFHNDDANAKSAYEAGVTADFAVRGFAGQENTILEGACAWSAASTQADKLNLIYMQKWVSLFYMDHMEAWSEIRRTDCPKLSSYSAAQIQASESVYTPGELVAPWTNGLEAGGLMKRMTYPLSARQQNVNTPAGVPGSTPVWWDIK 480
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480


Chain B from PDB  Type:PROTEIN  Length:943
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeehhhhhhh................eeee........eeee.............eee........................hhhhhhhhhh..eeeee.........hhhhhh.eee.............ee.eeeeeeeee............ee..ee...............eeee......eeeeee.......hhhhh..eeeeeeeeeeeee...eeeeeeeeeeeee........eeeeeeeeeeeeee...eeeeeeeeeeeeeee........hhhhhhhh......hhhhh...hhhhh...........hhhhhhhhheeeeeeeeeeeeeeeeeee...eeeeeeeeeeeeeeeeeeee.hhhhhhh.....hhhhhhhh.......eeeeeeeeeeeeeeeeeeeeeeee..eeeeeeeeeeeeeeeeeeeeeeee.................eeeeeeeeeeeeeeeeeeeeee...eeeeeeeeeeee...hhhh.eeeeeeeeeee........eeeeeeeeeeeeeee..............eeee..eeee.............ee.......eeeeeeeeeeeeee....eeeeeeeeeeeee..eeeee.hhhhh..eeeee...eeeeeeeeeeeeeeeee..eeeeeeeeeeeeeeee...hhhhh.eeeeee.....eeeee....eeeeee..........................ee.......eeeeeeeeeee..eeeeeeeeeee..eeeehhhhhhhhh...hhhh............eeeee....eeeee........hhhhhhhhhhhhhhhh.eee..eeeeeeeeeeee.hhhhh......eeeeeeeeeeeeee.................hhhhh.ee......eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fq7 B  37 EKALGYAATSVGGEKIAESRTSDVMSSLAGKIAGVQISSTSSDPGASNSVIIRGVSSLSGTNQPLYVVDGVPLNNSTVYSTDGLNSGYDFGNGANAINPDDVANMTILKGAAATALYGSRAANGVVMITTKSGRKEKGVGIEYNGGVQWSTVLRLPEFQNEFGMGWNGNHTELENGSWGPRFDGSMQLWGNVYNNSQKLKPYVAMPDNIKDFFDAGFRYSNSLSFNGATDKSDYYVSFSQISDDGMIPTDADSYDKYTFSARGSHKAGALTFSSSLNYAYQKNNFATTGQGLSMLNSLYQTPRDISIIGLEDQNDPFNTPGYYYTPYGVMNPYYILNNYLNEYESERFYGKFQLDYEFLKYFKFTYRMGLDTTTGQSDKGKPNLYALYYEGTPNGEGQGSSSPFSGETGQYSEQITRRREINQDIMVNFNMPVNDFNINALVGFNGNERKVSYQYSEVNDLTIPTWFNLKNSGKTPIVEQHMELRRLMGVFGQFEGSWKNMLYLTVTARNDWSSTLPKENRSFFYPGITGSFIFSELQDVITFGKIRASWGKTGNDADVYMVNPVYAQSSNRIPFGSLTFPLGGVNAYSAGNVLGSNTLSPEMTTESEVGLNMAFFKNRLSFDVSYYNRNTDKQIFSLAMDPASGYTAQNMNLGKIRNRGIELLISGTPIRTKDFSWELTWNFTKNWSKVISLPEELGGITTIYGLNGGTSMYAITGMPVGVFKAQVAERDPQGRIVVNSSTGLPVEASEFGICGDMNNKYQMGVSTNLKYKGISLGIDFDIRQGGVMYSRTKDINYFTGNAIQTAYNDRNPLIVPNSVNKIVNGENVTYVENTTPITSSNIYKYWGDGGSDMGSCFLVDKSYVKLRSVVLGWDLPKRWLAKTPFQAVKVSAYGNNLFVWTPSSNTFIDPEMTSFGNDLEGNYGEYTANPSSRRFGFNLMVKF 984
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566     ||581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841       851       861       871       881       891       901       911       921       931       941       951       961       971       981   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 572|                                                                                                                                                                                                                                                                                                                                                                                                                      
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  578                                                                                                                                                                                                                                                                                                                                                                                                                      


Chain C from PDB  Type:PROTEIN  Length:480
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee......hhhhhh...hhhhh.hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhee.......hhhhh....eehhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh......eee..........hhhhhhhhh.....eeehhhhhhhhhhh.hhhhhh.................hhhhhhhhh.....hhhhh............eeeehhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.....hhhhhh...........hhhhhhhhhhhhhhh...hhhhhhhhhhhhh.......hhhhhhhhhhhh........................hhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5fq7 C   1 CDLNINDDPNYPMNDQVTADLIFPSISASIASAVGGEIYNYAGFFAQYYEQKPESNQYNTLCEYTFTESSQQMDYSYRILFAGALEDAKQVLEKTTNPADRFATTILRAYAFQIMVDNTSDSPYSEALQGNANATPKWDTGETVYKGILGEIDAAEAALDGSGMDVPDLIFNKNIAQWKGFANALRLRMYLRFIDANIDAASYTEKVKTLVQNNEFFTGDVKLDCFLDETDKRNPWYNTNAVGLTGNHCAAYPLVSYLSSTGDPRIAYGISKTDADGKYVGQLPGGKTHMQSILGTDNWKNKNVSAIDYSIGATKPVYFFTQAELQFLIAEVYARFHNDDANAKSAYEAGVTADFAVRGFAGQENTILEGACAWSAASTQADKLNLIYMQKWVSLFYMDHMEAWSEIRRTDCPKLSSYSAAQIQASESVYTPGELVAPWTNGLEAGGLMKRMTYPLSARQQNVNTPAGVPGSTPVWWDIK 480
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480


Chain D from PDB  Type:PROTEIN  Length:943
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeehhhhhhh.....hhhhh.....eeeee........eeeee............eee..........ee.........eeehhhhh.hhh.eeeeeee.....hhhhhhhhhh.eeeeee...........eeeeeeeeeee............ee..ee...............eeee......eeeeee...hhhhh......eeeeeeeeeeeee...eeeeeeeeeeeee........eeeeeeeeeeeeeee..eeeeeeeeeeeeeee..........hhhhhh.....hhhhh....................hhhhhhhhheeeeeeeeeeeeeeeeeee...eeeeeeeeeeeeeeeeeeee.hhhhhhh.....hhhhhhhh.......eeeeeeeeeeeeeeeeeeeeee......eeeeeeeeeeeeeeeeeeeeee.................eeeeeeeeeeeeeeeeeeeeee...eeeeeeeeeeee...hhhh.eeeeeeeeeee.........eeeeeeeeeeeeeee..........eee.eeee..eeee........eee..ee.......eeeeeeeeeeeeee....eeeeeeeeeeeee..eeeee.hhhhh..eeeee...eeeeeeeeeeeeeeee...eeeeeeeeeeeeeeee...hhhhh..eeeee.....eeee.....eeeeee..........................ee.......eeeeeeeeeee..eeeeeeeeeee..eeeehhhhhhhhh...hhhh............eeeeee..eeeeee........hhhhhhhh...hhhhh.eee..eeeeeeeeeeee............eeeeeeeee.......................hhhh.ee......eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fq7 D  38 KALGYAATSVGGEKIAESRTSDVMSSLAGKIAGVQISSTSSDPGASNSVIIRGVSSLSGTNQPLYVVDGVPLNNSTVYSTDGLNSGYDFGNGANAINPDDVANMTILKGAAATALYGSRAANGVVMITTKSGRKEKGVGIEYNGGVQWSTVLRLPEFQNEFGMGWNGNHTELENGSWGPRFDGSMQLWGNVYNNSQKLKPYVAMPDNIKDFFDAGFRYSNSLSFNGATDKSDYYVSFSQISDDGMIPTDADSYDKYTFSARGSHKAGALTFSSSLNYAYQKNNFATTGQGLSMLNSLYQTPRDISIIGLEDQNDPFNTPGYYYTPYGVMNPYYILNNYLNEYESERFYGKFQLDYEFLKYFKFTYRMGLDTTTGQSDKGKPNLYALYYEGTPNGEGQGSSSPFSGETGQYSEQITRRREINQDIMVNFNMPVNDFNINALVGFNGNERKVSYQYSEVNDLTIPTWFNLKNSGKTPIVEQHMELRRLMGVFGQFEGSWKNMLYLTVTARNDWSSTLPKENRSFFYPGITGSFIFSELLQDVITFGKIRASWGKTGNDADVYMVNPVYAQSSNRIPFGSLTFPLGGVNAYSAGNVLGSNTLSPEMTTESEVGLNMAFFKNRLSFDVSYYNRNTDKQIFSLAMDPASGYTAQNMNLGKIRNRGIELLISGTPIRTKDFSWELTWNFTKNWSKVISLPEELGGITTIYGLNGGTSMYAITGMPVGVFKAQVAERDPQGRIVVNSSTGLPVEASEFGICGDMNNKYQMGVSTNLKYKGISLGIDFDIRQGGVMYSRTKDINYFTGNAIQTAYNDRNPLIVPNSVNKIVNGENVTYVENTTPITSSNIYKYWGDGGSDMGSCFLVDKSYVKLRSVVLGWDLPKRWLAKTPFQAVKVSAYGNNLFVWTPSSNTFIDPEMTSFGNDLEGNYGEYTANPSSRRFGFNLMVKF 984
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567     ||581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841       851       861       871       881       891       901       911       921       931       941       951       961       971       981   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 573|                                                                                                                                                                                                                                                                                                                                                                                                                      
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  578                                                                                                                                                                                                                                                                                                                                                                                                                      


Chain E from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhheeeeeeeeeee..eee.....................................................ee......eeeeeeeeeeeeeee..................................hhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fq7 E   4 DTEPGGTAVEKMAGDWWVTVNAFIDGKEVEDPFGAGHLQMSTYNTASNSETEMWLDDLGNFWEYKLKVNVNYAARTFSTTGFVDNVTYESKVKITDGKVLEKAATTPSGMPADSIVYMVQFDDDEDGLTYKVSGFRRTGFPADDF 148
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143     


Chain F from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhheeeeeeeeeee..eee..........................................hhh........ee......eeeeeeeeee.......................................hhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fq7 F   4 DTEPGGTAVEKMAGDWWVTVNAFIDGKEVEDPFGAGHLQMSTYNTASNSETEMWLDDLGNFWEYKLKVNVNYAARTFSTTGFVDNVTYESKVKITDGKVLEKAATTPSGMPADSIVYMVQFDDDEDGLTYKVSGFRRTGFPADDF 148
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143     


Chain G from PDB  Type:PROTEIN  Length:84
                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........eeee.eeeee....eee...........eeeee.....hhhheee.........eeeeeee.....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------ Transcript
                 5fq7 G   2 DKSTDDTSKVTYFVTLEREGDEKIVLEKGQPFVEPGYYAEMNGEDITESVQIKGSVDVNTPYNLVYAAYNEDGFAKTFTRTVYV  87
                                    11        21        31        41        51        61||      73        83    
                                                                                       62|                      
                                                                                        65                      


Chain H from PDB  Type:PROTEIN  Length:89
                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeee.eeeee....eeeee.........eeeee.....hhhheee........eeeeeeeeee.....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                 5fq7 H   2 DKSTDDTSKVTYFVTLEREGDEKIVLEKGQPFVEPGYYAEMNGEDITESVQIKGSVDVNTPGIYNLVYAAYNEDGFAKTFTRTVYVADN  90
                                    11        21        31        41        51        61        71        81         


Chain I from PDB  Type:PROTEIN  Length:10
                                          
               SCOP domains ---------- SCOP domains
               CATH domains ---------- CATH domains
               Pfam domains ---------- Pfam domains
         Sec.struct. author .......... Sec.struct. author
                 SAPs(SNPs) ---------- SAPs(SNPs)
                    PROSITE ---------- PROSITE
                 Transcript ---------- Transcript
                 5fq7 I   1 GGGGGGGGGG  10
                                    10


Chain P from PDB  Type:PROTEIN  Length:10
                                          
               SCOP domains ---------- SCOP domains
               CATH domains ---------- CATH domains
               Pfam domains ---------- Pfam domains
         Sec.struct. author .......... Sec.struct. author
                 SAPs(SNPs) ---------- SAPs(SNPs)
                    PROSITE ---------- PROSITE
                 Transcript ---------- Transcript
                 5fq7 P   1 GGGGGGGGGG  10
                                    10
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FQ7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FQ7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FQ7)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
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  Cis Peptide Bonds
    Arg B:170 - Lys B:171   [ RasMol ]  
    Arg D:170 - Lys D:171   [ RasMol ]  
    Asn B:430 - Gly B:431   [ RasMol ]  
    Asn D:430 - Gly D:431   [ RasMol ]  
    Asp B:105 - Gly B:106   [ RasMol ]  
    Asp D:105 - Gly D:106   [ RasMol ]  
    Cys A:412 - Pro A:413   [ RasMol ]  
    Cys C:412 - Pro C:413   [ RasMol ]  
    Gln B:579 - Asp B:580   [ RasMol ]  
    Gly B:304 - Ala B:305   [ RasMol ]  
    Gly B:775 - Arg B:776   [ RasMol ]  
    Gly D:304 - Ala D:305   [ RasMol ]  
    Gly D:775 - Arg D:776   [ RasMol ]  
    Lys B:173 - Gly B:174   [ RasMol ]  
    Lys D:173 - Gly D:174   [ RasMol ]  
    Phe B:621 - Pro B:622   [ RasMol ]  
    Phe D:621 - Pro D:622   [ RasMol ]  
    Ser B:441 - Gly B:442   [ RasMol ]  
    Ser B:95 - Gly B:96   [ RasMol ]  
    Ser D:441 - Gly D:442   [ RasMol ]  
    Ser D:95 - Gly D:96   [ RasMol ]  
 

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  5fq7
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8A5H5_BACTN | Q8A5H5: 5fq6 5fq8
        Q8A5H6_BACTN | Q8A5H6: 5fq4 5fq6 5fq8
        Q8A5H7_BACTN | Q8A5H7: 5fq3 5fq8
        Q8A5H8_BACTN | Q8A5H8: 3h3i 5fq6 5fq8

(-) Related Entries Specified in the PDB File

5fq3 CRYSTAL STRUCTURE OF THE LIPOPROTEIN BT2262 FROM BACTEROIDES THETAIOTAOMICRON
5fq4 CRYSTAL STRUCTURE OF THE LIPOPROTEIN BT2263 FROM BACTEROIDES THETAIOTAOMICRON
5fq6 CRYSTAL STRUCTURE OF THE SUSCD COMPLEX BT2261-2264 FROM BACTEROIDES THETAIOTAOMICRON
5fq8 CRYSTAL STRUCTURE OF THE SUSCD COMPLEX BT2261-2264 FROM BACTEROIDES THETAIOTAOMICRON