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(-) Description

Title :  TETR(D) E147A MUTANT IN COMPLEX WITH ANHYDROTETRACYCLINE AND MAGNESIUM
 
Authors :  S. Werten, J. Schneider, G. J. Palm, W. Hinrichs
Date :  17 Oct 15  (Deposition) - 06 Apr 16  (Release) - 15 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.85
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Transcription, Repressor, Antibiotic Resistance, Tetr (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Werten, J. Schneider, G. J. Palm, W. Hinrichs
Modular Organisation Of Inducer Recognition And Allostery In The Tetracycline Repressor
Febs J. V. 283 2102 2016
PubMed-ID: 27028290  |  Reference-DOI: 10.1111/FEBS.13723

(-) Compounds

Molecule 1 - TETRACYCLINE REPRESSOR, CLASS D, E147A MUTANT
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: K-12
    Expression System Taxid: 83333
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 7)

Asymmetric Unit (3, 7)
No.NameCountTypeFull Name
1CL5Ligand/IonCHLORIDE ION
2MG1Ligand/IonMAGNESIUM ION
3TDC1Ligand/Ion5A,6-ANHYDROTETRACYCLINE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MG-1Ligand/IonMAGNESIUM ION
3TDC2Ligand/Ion5A,6-ANHYDROTETRACYCLINE

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:64 , SER A:67 , ASN A:82 , PHE A:86 , HIS A:100 , THR A:103 , ARG A:104 , PRO A:105 , VAL A:113 , GLN A:116 , SER A:138 , MET A:177 , MG A:1210 , HOH A:2065 , HOH A:2066 , HOH A:2067 , HOH A:2073BINDING SITE FOR RESIDUE TDC A1209
2AC2SOFTWAREHIS A:100 , TDC A:1209 , HOH A:2065 , HOH A:2066 , HOH A:2067BINDING SITE FOR RESIDUE MG A1210
3AC3SOFTWAREGLY A:102 , HOH A:2066 , HOH A:2087BINDING SITE FOR RESIDUE CL A1211
4AC4SOFTWARESER A:2 , ARG A:3 , SER A:74 , SER A:77BINDING SITE FOR RESIDUE CL A1212
5AC5SOFTWARELEU A:4 , GLN A:76 , ARG A:80 , HOH A:2100BINDING SITE FOR RESIDUE CL A1213
6AC6SOFTWAREASN A:5 , GLU A:7BINDING SITE FOR RESIDUE CL A1214
7AC7SOFTWARETHR A:26 , THR A:27BINDING SITE FOR RESIDUE CL A1215

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FKO)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5FKO)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:198
                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh.hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh.hhhhhhh....hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5fko A   2 SRLNRESVIDAALELLNETGIDGLTTRKLAQKLGIEQPTLYWHVKNKRALLDALAVEILARHHDYSLPAAGESWQSFLRNNAMSFRRALLRYRDGAKVHLGTRPDEKQYDTVETQLRFMTENGFSLRDGLYAISAVSHFTLGAVLAQQEHTAALNLPPLLREALQIMDSDDGEQAFLHGLESLIRGFEVQLTALLQIV 208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151   ||  170       180       190       200        
                                                                                                                                                                                   155|                                           
                                                                                                                                                                                    165
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FKO)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FKO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FKO)

(-) Gene Ontology  (6, 11)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        C6G9U5_ECOLX | C6G9U5: 5fkk 5fkl 5fkm 5fkn
        TETR4_ECOLX | P0ACT4: 1a6i 1bjz 1ork 1qpi 2fj1 2ns7 2ns8 2o7o 2tct 2trt 2vke 2vkv 2x6o 2x9d 2xb5 2xgc 2xgd 2xge 2xpu 2xpv 2xpw 2xrl 3fk6 3fk7 3zqf 3zqg 3zqh 3zqi 4abz 4aux 4b1r 4b3a 4d7m 4d7n 4v2f 4v2g 5fkk 5fkl 5fkm 5fkn

(-) Related Entries Specified in the PDB File

5fkk TETR(D) N82A MUTANT IN COMPLEX WITH ANHYDROTETRACYCLINE AND MAGNESIUM
5fkl TETR(D) H100A MUTANT IN COMPLEX WITH ANHYDROTETRACYCLINE AND MAGNESIUM
5fkm TETR(D) T103A MUTANT IN COMPLEX WITH ANHYDROTETRACYCLINE AND MAGNESIUM, I4(1)22
5fkn TETR(D) T103A MUTANT IN COMPLEX WITH ANHYDROTETRACYCLINE AND MAGNESIUM, P4(3)2(1)2