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(-) Description

Title :  CRYO-EM STRUCTURE OF YEAST RNA POLYMERASE III ELONGATION COMPLEX AT 3.9 A
 
Authors :  N. A. Hoffmann, A. J. Jakobi, M. Moreno-Morcillo, S. Glatt, J. Kosinski W. J. Hagen, C. Sachse, C. W. Muller
Date :  06 Oct 15  (Deposition) - 25 Nov 15  (Release) - 13 Jan 16  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  3.90
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
Keywords :  Rna Polymerase Iii, Pol Iii, Transcription, Rna Polymerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. A. Hoffmann, A. J. Jakobi, M. Moreno-Morcillo, S. Glatt, J. Kosinski, W. J. H. Hagen, C. Sachse, C. W. Muller
Molecular Structures Of Unbound And Transcribing Rna Polymerase Iii.
Nature V. 528 231 2015
PubMed-ID: 26605533  |  Reference-DOI: 10.1038/NATURE16143

(-) Compounds

Molecule 1 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1
    Chains: A
    EC Number: 2.7.7.6
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASE III SUBUNIT C1, DNA-DIRECTED RNA POLYMERASE III LARGEST SUBUNIT, RNA POLYMERASE III SUBUNIT C160, RNA POLYMERASE III
 
Molecule 2 - DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1
    Chains: C
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASES I AND III SUBUNIT AC1, C37, DNA-DIRECTED RNA POLYMERASES I AND III 40 KDA POLYPEPTIDE, AC40, C40, RNA POLYMERASE III
 
Molecule 3 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2
    Chains: B
    EC Number: 2.7.7.6
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASE III SUBUNIT C2, C128, DNA-DIRECTED RNA POLYMERASE III 130 KDA POLYPEPTIDE, RNA POLYMERASE III
 
Molecule 4 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1
    Chains: E
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASES I, II, AND III SUBUNIT ABC1, ABC27, DNA-DIRECTED RNA POLYMERASES I, II, AND III 27 KDA POLYPEPTIDE, RNA POLYMERASE III
 
Molecule 5 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC9
    Chains: D
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASE III SUBUNIT C9, RNA POLYMERASE III SUBUNIT C 17, RNA POLYMERASE III
 
Molecule 6 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8
    Chains: G
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASE III SUBUNIT C8, DNA-DIRECTED RNA POLYMERASE III 25 KDA POLYPEPTIDE, RNA POLYMERASE III SUBUNIT C25, RNA POLYMERASWE POLYMERASE III
 
Molecule 7 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
    Chains: F
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASES I, II, AND III SUBUNIT ABC2, ABC23, DNA-DIRECTED RNA POLYMERASES I, II, AND III 23 KDA POLYPEPTIDE, RNA POLYMERASE III
 
Molecule 8 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10
    Chains: I
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASE III SUBUNIT C10, DNA-DIRECTED RNA POLYMERASE S III 12.5 KDA POLYPEPTIDE, RNA POLYMERASE III SUBUNIT C11, RNA POLYMERASE III
 
Molecule 9 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 3
    Chains: H
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASES I, II, AND III SUBUNIT ABC3, ABC14.4, ABC14 .5, DNA-DIRECTED RNA POLYMERASES I, II, AND III 14.5 KDA POLYPEPTIDE, RNA POLYMERASE III
 
Molecule 10 - DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC2
    Chains: K
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASES I AND III SUBUNIT AC2, AC19, DNA-DIRECTED RNA POLYMERASES I AND III 16 KDA POLYPEPTIDE, RPA19, RNA POLYMERASE III
 
Molecule 11 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 5
    Chains: J
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASES I, II, AND III SUBUNIT ABC5, ABC10-BETA, AB C8, DNA-DIRECTED RNA POLYMERASES I, II, AND III 8.3 KDA POLYPEPTIDE, RNA POLYMERASE III
 
Molecule 12 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC5
    Chains: M
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASE III SUBUNIT C5, DNA-DIRECTED RNA POLYMERASE III 37 KDA POLYPEPTIDE, RNA POLYMERASE III SUBUNIT C37, RNA POLYMERASE III
 
Molecule 13 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 4
    Chains: L
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASES I, II, AND III SUBUNIT ABC4, ABC10-ALPHA, RNA POLYMERASE III
 
Molecule 14 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC3
    Chains: O
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASE III SUBUNIT C3, C82, DNA-DIRECTED III 74 KDA POLYPEPTIDE, C74, RNA POLYMERASE III
 
Molecule 15 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4
    Chains: N
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASE III SUBUNIT C4, C53, DNA-DIRECTED RNA POLYMERASE III 47 KDA POLYPEPTIDE, RNA POLYMERASE III
 
Molecule 16 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC7
    Chains: Q
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASE III SUBUNIT C7, DNA-DIRECTED RNA POLYMERASE III 31 KDA POLYPEPTIDE, C31, RNA POLYMERASE III
 
Molecule 17 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC6
    Chains: P
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: RNA POLYMERASE III SUBUNIT C6, C34, DNA-DIRECTED RNA POLYMERASE III 36 KDA POLYPEPTIDE, RNA POLYMERASE III
 
Molecule 18 - NON-TEMPLATE DNA
    Chains: S
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synthetic: YES
 
Molecule 19 - RNA
    Chains: R
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synthetic: YES
 
Molecule 20 - TEMPLATE DNA
    Chains: T
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOPQRST

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 41)

Asymmetric/Biological Unit (2, 41)
No.NameCountTypeFull Name
1UNK35Mod. Amino Acid
2ZN6Ligand/IonZINC ION

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:67 , THR A:69 , CYS A:70 , CYS A:77 , HIS A:80BINDING SITE FOR RESIDUE ZN A2000
2AC2SOFTWARECYS A:107 , ASN A:109 , CYS A:110 , CYS A:154 , CYS A:157BINDING SITE FOR RESIDUE ZN A2001
3AC3SOFTWARECYS B:1095 , LYS B:1097 , CYS B:1098 , CYS B:1107 , CYS B:1110BINDING SITE FOR RESIDUE ZN B2000
4AC4SOFTWARECYS I:5 , CYS I:8 , CYS I:26 , CYS I:29BINDING SITE FOR RESIDUE ZN I2000
5AC5SOFTWARECYS J:7 , CYS J:10 , CYS J:45 , CYS J:46BINDING SITE FOR RESIDUE ZN J2000
6AC6SOFTWARECYS L:31 , CYS L:34 , CYS L:48 , CYS L:51BINDING SITE FOR RESIDUE ZN L2000

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FJ8)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Glu A:1099 -Pro A:1100
2Asp B:816 -Pro B:817
3Phe O:465 -Pro O:466

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FJ8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FJ8)

(-) Exons   (0, 0)

(no "Exon" information available for 5FJ8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:1422
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........eeeeeeeee....hhhhhh..........................................hhhhh.....ee...........hhhhhhhhh..ee....ee...hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.....................ee..........hhhhhhhhhhhhh....hhhhhhhh....ee.hhhhhhh................................ee...................hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh.............................hhhhhhh..ee..eeee.ee........eeeeehhhhh....ee.....hhhhhhhhhhhh......eeeee.......ee.......hhhhhh....eeee......eeeee..........eeeeeeee....eee................eeee...hhhhhhhhhhhh...................hhhhhhhhhhhh...eehhhhhhhhhhhhh............ee.....eehhhhhhhhhh...........ee.......................ee.......................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh...hhhhhhhhhhhh.hhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhh....hhhhhhhhhh.............................................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....ee.....eee.hhhhh..............hhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...........hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh........................hhhhhhhhhhh...hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh......hhhhhhhhhhh.......eeee........hhhhhhhhhh...hhhhhh.eeeeeee..eeeeeee.hhhhhhhh.....hhhhhhhhhhhhhhhh.....ee....eeee......hhhhhhhhhhhhhh............eeeeeee...eeeeeee...hhhhhhh........ee.hhhhhh....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.......hhhhhh....hhhhhhhhh.hhhhhhhhhhh.......hhhhhhhhh....hhhhhheeee..............hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5fj8 A    2 KEVVVSETPKRIKGLEFSALSAADIVAQSEVEVSTRDLFDLEKDRAPKANGALDPKMGVSSSSLECATCHGNLASCHGHFGHLKLALPVFHIGYFKATIQILQGICKNCSAILLSETDKRQFLHELRRPGVDNLRRMGILKKILDQCKKQRRCLHCGALNGVVKKAAALKIIHDTFRWVGKKSAPEKDIWVGEWKEVLAHNPELERYVKRCMDDLNPLKTLNLFKQIKSADCELLGIDATVPSGRPETYIWRYLPAPPVCIRPSVMMQDSPASNEDDLTVKLTEIVWTSSLIKAGLDKGISINNMMEHWDYLQLTVAMYINSDSVNPAMLPGSSNGGGKVKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGANYLLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKIRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVKNNLLTPKSGEPIIAATQDFITGSYLISHKDSFYDRATLTQLLSMMSDGIEHFDIPPPAIMKPYYLWTGKQVFSLLIKPNHNSPVVINLDAKNKVFVPPKSKSLPNEMSQNDGFVIIRGSQILSGVMDKSVLGDGKKHSVFYTILRDYGPQEAANAMNRMAKLCARFLGNRGFSIGINDVTPADDLKQKKEELVEIAYHKCDELITLFNKGELETQPGCNEEQTLEAKIGGLLSKVREEVGDVCINELDNWNAPLIMATCGSKGSTLNVSQMVAVVGQQIISGNRVPDGFQDRSLPHFPKNSKTPQSKGFVRNSFFSGLSPPEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSCQYDNTVRTSANGIVQFTYGGDGLDPLEMEGNAQPVNFNRSWDHAYNITFNNQDKGLLPYAIMETANEILGPLEERLVRYDNSGCLVKREDLNKAEYVDQYDAERDFYHSLREYINGKATALANLRKSRGMLGLLEPPAKELQGIDPDETVPDNVKTSVSQLYRISEKSVRKFLEIALFKYRKARLEPGTAIGAIGAQSIGEPMNVTLGVPRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVEKTLLSDVAFYVQDVYKDNLSFIQVRIDLGTIDKLQLELTIEDIAVAITRASKLKIQASDVNIIGKDRIAINVFPSENDVFYRMQQLRRALPDVVVKGLPDISRAVINIRDDGKRELLVEGYGLRDVMCTDGVIGSRTTTNHVLEVFSVLGIEAARYSIIREINYTMSNHGMSVDPRHIQLLGDVMTYKGEVLGITRFGLSKMRDSVLQLASFEKTTDHLFDAAFYMKKDAVEGVSECIILGQTMSIGTGSFKVVKGTNISEKDLVPKRCLFESLSNEAALKAN 1460
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161      |177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737       747       757       767       777       787       797       807       817       827       837       847       857       867       877       887       897       907       917       927       937       947       957       967       977       987       997      1007      1017      1027      1037      1047      1057      1067      1077      1087      1097  ||  1123      1133      1143      1153      1163      1173      1183      1193      1203      1213      1223      1233  ||  1258      1268      1278      1288      1298      1308      1318      1328      1338      1348      1358      1368      1378      1388      1398      1408      1418      1428      1438      1448      1458  
                                                                                                                                                                                                168|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         1100|                                                                                                                   1236|                                                                                                                                                                                                                
                                                                                                                                                                                                 175                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          1117                                                                                                                    1252                                                                                                                                                                                                                


Chain B from PDB  Type:PROTEIN  Length:1114
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.ee.........eeeeeeee.............hhhhhhhh.......eeeeeee.......ee..eeee.................hhhhhhhh.........ee....eeee.eeeee.....eeee.....eeeeeeeee..eeeeeeeeeee..eeeee.......eehhhhhhhh.......hhhhhh....hhhhhhhhhhhhhhhhh...hhhhhhhhhhh.............hhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhh........hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhh..hhhhhhhhhhhhhh..............eee....hhhhhhhhh.eee...............hhhh..................ee.....ee........hhhhhhhh..................eee..ee.....hhhhhhhhhhhhhhh.......eeeee....eeeee.....eeeeeeeee..ee...hhhhhhhhh.....hhhhhh..eeee..hhhhhh....hhhhh.....ee..hhhhhh.hhhhh..hhhhhhhhhhhhhhhhhhhh.....hhhhhh...eeeee.......eehhhhhhh........eee..ee..........eeeee..........eeeeeeeeeee.......................................ee.........ee...................ee..........eeeeeeeee......eeeeeeeeeee......eee......eeeeeee................ee..hhhhhhh.hhhhhhhhhhhhhhhhh..eeee..ee..hhhhhhhhhh........................ee..eeeee.........eee.....................ee.hhhhhhhhhhh..hhhhhhhh.......eeeee.....ee.............eeeee.hhhhhhhhhhhh....eeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fj8 B   36 DEINTAQDKWHLLPAFLKVKGLVKQHLDSFNYFVDTDLKKIIKANQLILSDVDPEFYLKYVDIRVGKKSSSSTKDYLTPPHECRLRDMTYSAPIYVDIEYTRGRNIIMHKDVEIGRMPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADEKKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQLVCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLTILQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGEACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHLNYGVYLNGTLIGSIRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSDGQSRVKDIHLRKLLDGELDFDDFLKLGLVEYLDVNEENDSYIALYEKDIVPSMTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQFKRIDTLLYLMTYPQQPMVKTKTIELIDYDKLPAGQNATVAVMSYSGYDIEDALVLNKSSIDRGFGRCETRRKTTTVLKRYANHTQDIIGGMRVDENGDPIWQHQSLGPDGLGEVGMKVQSGQIYINKSVPTNSADAPNPNNVNVQTQYREAPVIYRGPEPSHIDQVMMSVSDNDQALIKVLLRQNRRPELGDKFSSRHGQKGVCGIIVKQEDMPFNDQGIVPDIIMNPHGFPSRMTVGKMIELISGKAGVLNGTLEYGTCFGGSKLEDMSKILVDQGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISSDAFEVDVCDKCGLMGYSGWCTTCKSAENIIKMTIPYAAKLLFQELLSMNIAPRLRLEDIFQQ 1149
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745       755       765       775       785       795       805       815       825       835       845       855       865       875       885       895       905       915       925       935       945       955       965       975       985       995      1005      1015      1025      1035      1045      1055      1065      1075      1085      1095      1105      1115      1125      1135      1145    


Chain C from PDB  Type:PROTEIN  Length:335
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eee....ee.....................hhhhhheeee.......eeeeee..hhhhhhhhhhhhhh..eeeeeeeeeee......hhhhhhhhhhhh................hhhhh.......eeeeeee.....................eehhhhhee........................ee.....eeeeeeeeeeee.........eeeeeeeeeeeeee......hhhhhhhhhh.........................hhhhhhhhhhhheeeeeeeeeeeeeeee....hhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fj8 C    1 MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINIDTSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFADCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ  335
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330     


Chain D from PDB  Type:PROTEIN  Length:119
                                                                                                                                                        
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee........hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..................hhhhhhh...........hhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                5fj8 D    1 MKVLEERNAFLSDYEVLKFLTDLEKKHLWDQKSLAPELQGITRNVVNYLSINKNFMSDESFAELMTKLNSFKLFKAEKLQIVNQLPANMVHLYSIVEECDARFDEKTIEEMLEIISGYA  161
                                    10        20        30    ||  57        67    || 102       112       122       132       142       152         
                                                             35|                 72|                                                               
                                                              53                  98                                                               


Chain E from PDB  Type:PROTEIN  Length:215
                                                                                                                                                                                                                                                        
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh.hhhhhhhhh........hhhhheee...hhhhhhh.....eeeee........hhhhhhhhhhhhhh....eee.....................eee................eeee.hhhhhhhhh..............................eeeeee.....eeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fj8 E    1 MDQENERNISRLWRAFRTVKEMVKDRGYFITQEEVELPLEDFKAKYCDSMGRPQRKMMSFQANPTEESISKFPDMGSLWVEFCDEPSVGVKTMKTFVIHIQEKNFQTGIFVYQNNITPSAMKLVPSIPPATIETFNEAALVVNITHHELVPKHIRLSSDEKRELLKRYRLKESQLPRIQRADPVALYLGLKRGEVVKIIRKSETSGRYASYRICM  215
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210     


Chain F from PDB  Type:PROTEIN  Length:83
                                                                                                                    
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhhhhhhhh............hhhhhhhhhhhh....eeee..........ee...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                5fj8 F   71 EKAIPKDQRATTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKKIPLVIRRYLPDGSFEDWSVEELIV  153
                                    80        90       100       110       120       130       140       150   


Chain G from PDB  Type:PROTEIN  Length:191
                                                                                                                                                                                                                                
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeehhhhh..hhhhhhhhhhhhhh...ee...eeeeeeeeee.............eeeeeeeeeeee......eeeeee......ee.ee.........ee........ee......ee..........eeeee..eeee......hhhhhhhhhhhh.....eeee............... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fj8 G    2 FILSKIADLVRIPPDQFHRDTISAITHQLNNKFANKIIPNVGLCITIYDLLTVEEGQLKPGDGSSYINVTFRAVVFKPFLGEIVTGWISKCTAEGIKVSLLGIFDDIFIPQNMLFEGCYYTPEESAWIWPKLYFDVNEKIRFRIEREVFVDVKPKSPKERELEERAQEKPPAYALLGSCQTDGMGLVSWWE  212
                                    11        21        31        41        51        61        71        81        91       101       111       121       131|      146       156       166      |191       201       211 
                                                                                                                                                           131|                                 173|                       
                                                                                                                                                            137                                  189                       


Chain H from PDB  Type:PROTEIN  Length:140
                                                                                                                                                                             
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeeee.......eeeeeeee.......eeeeee..........eeeeeee............................eeee..eeeeeee...eeeeeeee..eeeeeee.............eeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fj8 H    1 MSNTLFDDIFQVSEVDPGRYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIASSLNLEDSATRSWRPPQAGDRSLADDYDYVMYGTAYKFEEVSKDLIAVYYSFGGLLMRLEGNYRNLNNLKQENAYLLIRR  146
                                    10        20        30        40        50        60      ||76        86        96       106       116       126       136       146
                                                                                             67|                                                                        
                                                                                              74                                                                        


Chain I from PDB  Type:PROTEIN  Length:42
                                                                           
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ............eeee.....eeee...........eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                5fj8 I    1 MLSFCPSCNNMLLITSGDSGVYTLACRSCPYEFPIEGIEIYD   42
                                    10        20        30        40  


Chain J from PDB  Type:PROTEIN  Length:67
                                                                                                    
               SCOP domains ------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhh...hhhhhhhh....hhhhhhhhhh...hhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                5fj8 J    1 MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKFLRYNPLE   67
                                    10        20        30        40        50        60       


Chain K from PDB  Type:PROTEIN  Length:101
                                                                                                                                      
               SCOP domains ----------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee...........eeeee...hhhhhhhhhhhhhh...eeeeeee........eeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------- Transcript
                5fj8 K   42 PDREKIKLLTQATSEDGTSASFQIVEEDHTLGNALRYVIMKNPDVEFCGYSIPHPSENLLNIRIQTYGETTAVDALQKGLKDLMDLCDVVESKFTEKIKSM  142
                                    51        61        71        81        91       101       111       121       131       141 


Chain L from PDB  Type:PROTEIN  Length:45
                                                                              
               SCOP domains --------------------------------------------- SCOP domains
               CATH domains --------------------------------------------- CATH domains
               Pfam domains --------------------------------------------- Pfam domains
         Sec.struct. author ....ee........................ee.......eeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------- PROSITE
                 Transcript --------------------------------------------- Transcript
                5fj8 L   26 TLKYICAECSSKLSLSRTDAVRCKDCGHRILLKARTKRLVQFEAR   70
                                    35        45        55        65     


Chain M from PDB  Type:PROTEIN  Length:164
                                                                                                                                                                                                     
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eee.......eeeee..............................eee........hhhhhhhhh.....eeee..ee....eeeeeee..eeeeee...ee..ee.hhhhhhhhhhhhhh......hhhhhhhhhhh..........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fj8 M   71 IEEFPLKISGEEESLHVFQYANRPRLVGRKPAEHPFISAARYKPKSHLWEIDIPLDEQAFYNKDKAESEWNGVNVQTLKGVGVENNGQYAAFVKDMQVYLVPIERVAQLKPFFKYIDDANVTRKQENRLTGSLLAHKVADEEANIELTWAEGTFEQFKDTIVKE  262
                                    80        90       100       110       120       130       140       150       160       170       180       190     ||228       238       248       258    
                                                                                                                                                       196|                                     
                                                                                                                                                        225                                     


Chain N from PDB  Type:PROTEIN  Length:110
                                                                                                                                               
               SCOP domains -------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhh.......eeee................ee.hhh.ee....................eeeeeeee..eeeeee.....eeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------- Transcript
                5fj8 N  274 KEAAAELELLNADHQHILRKLKKMNNKPERFMVFQLPTRLPAFERPAVGSIRVHKSGKLSVKIGNVVMDIGKGAETTFLQDVIALSIADDASSAELLGRVDGKIVVTPQI  422
                                   283       293       303       313      |362       372       382       392       402       412       422
                                                                        320|                                                              
                                                                         360                                                              


Chain O from PDB  Type:PROTEIN  Length:539
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhh.hhhhhhhhhhhhh..eehhhhhhhhh....hhhhhhhhhhhhh..eeeeee.......eeeeee...hhhhhh.hhhhhhhhhhh.......hhhhhhhhhhhhhhhhh..hhhhhhhhh............hhhhhh....ee.hhhhh.hhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhh.....................ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhh............hhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhh.......ee..ee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhhh.............................hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fj8 O   31 VMTISSLEQRTLNPDLFLYKELVKAHLGERAASVIGMLVALGRLSVRELVEKIDGMDVDSVKTTLVSLTQLRCVKYLQETAISGKKTTYYYYNEEGIHILLYSGLIIDEIITQMRVNDEEEHKQLVAEIVQNVISLGSLTVEDYLSSVTSDSMKYTISSLFVQLCEMGYLIQISKLHYTPIEDLWQFLYEKHYKNIPRNSPLSDLKKRSQAKMNAKTDFAKIINKPNELSQILTVDPKTSLRIVKPTVSLTINLDRFMKGRRSKQLINLAKTRVGSVTAQVYKIALRLTEQKSPKIRDPLTQTGLLQDLEEAKSFQDEAELVEEKTPGLTFNAIDLARHLPSASLINSHLKILASSNFPFLNETKPGVYYVPYSKLMPVLKSSVYEYVIASTLGPSAMRLSRCIRDNKLVSEKIINSTALMKEKDIRSTLASLIRYNSVEIQEVPRTADRSASRAVFLFRCKETHSYNFMRQNLEWNMANLLFKKEKLKQENSTLLKKANRDDLLPSELNQLKMVNERELNVFARLSRLLSLWEVFQMA  654
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370||     457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607  ||   625       635       645         
                                                                                                                                                                                                                                                                                                                                                                              371|                                                                                                                                                              610|                                   
                                                                                                                                                                                                                                                                                                                                                                               449                                                                                                                                                               619                                   


Chain P from PDB  Type:PROTEIN  Length:89
                                                                                                                          
               SCOP domains ----------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................hhhhhhhhhhh.......hhhhhhhhhhhh......eee...eee..hhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                5fj8 P  171 DIEFINSLLTIVWRFISENYSTTQEILEFITAAQVANVELTPSNIRSLCEVLVYDDKLEKVTHDCYRVTLESILQMSKHDKEVVYFDEW  317
                                   180       215       225       235       245       255       265     ||308         
                                            189|                                                     271|            
                                             215                                                      305            


Chain Q from PDB  Type:PROTEIN  Length:63
                                                                                                
               SCOP domains --------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhh..hhhhhh.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------- Transcript
                5fj8 Q   42 PINGPITNKERSLAVKYINFGKTVKDGPxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx 1105
                                    51        61      1071||||||1081||||||1092||||||1102|||
                                                      69|||||1078-UNK|1087-UNK|1097-UNK||||
                                                     1070-UNK|1079-UNK|1088-UNK|1098-UNK|||
                                                      1071-UNK|1080-UNK|1090-UNK|1099-UNK||
                                                       1072-UNK|1081-UNK|1091-UNK|1100-UNK|
                                                        1073-UNK 1082-UNK 1092-UNK 1101-UNK
                                                         1074-UNK 1083-UNK 1093-UNK 1102-UNK
                                                          1075-UNK 1084-UNK 1094-UNK 1103-UNK
                                                           1076-UNK 1085-UNK 1095-UNK 1104-UNK
                                                            1077-UNK 1086-UNK 1096-UNK 1105-UNK


Chain R from PDB  Type:DNA  Length:23
                                                        
                5fj8 R    1 AAGTCAAGTACTTACGCCTGGTC   23
                                    10        20   


Chain S from PDB  Type:DNA  Length:15
                                                
                5fj8 S    4 GAAAGTACTTGACTT   18
                                    13     


Chain T from PDB  Type:RNA  Length:9
                                          
                5fj8 T    7 AGACCAGGC   15
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FJ8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FJ8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FJ8)

(-) Gene Ontology  (39, 273)

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  5fj8
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RPAB1_YEAST | P20434: 1dzf 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4c2m 4c3h 4c3i 4c3j 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 4ym7 5c3e 5c44 5c4a 5c4j 5c4x 5fj9 5fja 5fmf 5fyw 5fz5 5g5l 5ip7 5ip9 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61 5sva 5u5q
        RPAB2_YEAST | P20435: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4c2m 4c3h 4c3i 4c3j 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 4ym7 5c3e 5c44 5c4a 5c4j 5c4x 5fj9 5fja 5fmf 5fyw 5fz5 5g5l 5ip7 5ip9 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61 5sva 5u5q
        RPAB3_YEAST | P20436: 1a1d 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4c2m 4c3h 4c3i 4c3j 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 4ym7 5c3e 5c44 5c4a 5c4j 5c4x 5fj9 5fja 5fmf 5fyw 5fz5 5g5l 5ip7 5ip9 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61 5sva 5u5q
        RPAB4_YEAST | P40422: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4c2m 4c3h 4c3i 4c3j 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 4ym7 5c3e 5c44 5c4a 5c4j 5c4x 5fj9 5fja 5fmf 5fyw 5fz5 5g5l 5ip7 5ip9 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61 5sva 5u5q
        RPAB5_YEAST | P22139: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4c2m 4c3h 4c3i 4c3j 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 4ym7 5c3e 5c44 5c4a 5c4j 5c4x 5fj9 5fja 5fmf 5fyw 5fz5 5g5l 5ip7 5ip9 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61 5sva 5u5q
        RPAC1_YEAST | P07703: 4c2m 4c3h 4c3i 4c3j 4ym7 5fj9 5fja 5g5l 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61
        RPAC2_YEAST | P28000: 4c2m 4c3h 4c3i 4c3j 4ym7 5fj9 5fja 5g5l 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61
        RPC10_YEAST | Q04307: 3qt1 5fj9 5fja
        RPC1_YEAST | P04051: 5fj9 5fja
        RPC2_YEAST | P22276: 5fj9 5fja
        RPC3_YEAST | P32349: 5fj9 5fja
        RPC4_YEAST | P25441: 5fj9 5fja
        RPC5_YEAST | P36121: 5fj9 5fja
        RPC6_YEAST | P32910: 5fj9 5fja
        RPC7_YEAST | P17890: 5fj9 5fja
        RPC8_YEAST | P35718: 2ckz 5fj9 5fja
        RPC9_YEAST | P47076: 2ckz 5fj9 5fja

(-) Related Entries Specified in the PDB File

5fj9 CRYO-EM STRUCTURE OF YEAST APO RNA POLYMERASE III AT 4.6 A
5fja CRYO-EM STRUCTURE OF YEAST RNA POLYMERASE III AT 4. 7 A