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(-) Description

Title :  TRANSCRIPTION INITIATION COMPLEX STRUCTURES ELUCIDATE DNA OPENING (OC)
 
Authors :  C. Plaschka, M. Hantsche, C. Dienemann, C. Burzinski, J. Plitzko, P. Cr
Date :  10 Mar 16  (Deposition) - 18 May 16  (Release) - 19 Apr 17  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  4.35
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,Q,R,T,U,V,W,X
Keywords :  Gene Expression, Transcription Initiation, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Plaschka, M. Hantsche, C. Dienemann, C. Burzinski, J. Plitzko, P. Cramer
Transcription Initiation Complex Structures Elucidate Dna Opening
Nature V. 533 353 2016
PubMed-ID: 27193681  |  Reference-DOI: 10.1038/NATURE17990

(-) Compounds

Molecule 1 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
    Chains: A
    EC Number: 2.7.7.6
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASE II SUBUNIT 1, RNA POLYMERASE II SUBUNIT B1, DNA-DIRECTED RNA POLYMERASE III LARGEST SUBUNIT, RNA POLYMERASE II SUBUNIT B220, RPB1
 
Molecule 2 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2
    Chains: B
    EC Number: 2.7.7.6
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASE II SUBUNIT 2, B150, DNA-DIRECTED RNA POLYMERASE II 140 KDA POLYPEPTIDE, RPB2
 
Molecule 3 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3
    Chains: C
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASE II SUBUNIT 3, RNA POLYMERASE II SUBUNIT B3, B44.5, DNA-DIRECTED RNA POLYMERASE II 45 KDA POLYPEPTIDE, RPB3
 
Molecule 4 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4
    Chains: D
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASE II SUBUNIT B4, B32, DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE, RPB4
 
Molecule 5 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1
    Chains: E
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASES I, II, AND III SUBUNIT ABC1, ABC27, DNA- DIRECTED RNA POLYMERASES I, II, AND III 27 KDA POLYPEPTIDE, RPB5
 
Molecule 6 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 2
    Chains: F
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASES I, II, AND III SUBUNIT ABC2, ABC23, DNA- DIRECTED RNA POLYMERASES I, II, AND III 23 KDA POLYPEPTIDE, RPB6
 
Molecule 7 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7
    Chains: G
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASE II SUBUNIT B7, B16, RPB7
 
Molecule 8 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 3
    Chains: H
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASES I, II, AND III SUBUNIT ABC3, ABC14.4, ABC14 .5, DNA-DIRECTED RNA POLYMERASES I, II, AND III 14.5 KDA POLYPEPTIDE, RPB8
 
Molecule 9 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9
    Chains: I
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASE II SUBUNIT B9, B12.6, DNA-DIRECTED RNA POLYMERASE II 14.2 KDA POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II SUBUNIT 9, RPB9
 
Molecule 10 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 5
    Chains: J
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASES I, II, AND III SUBUNIT ABC5, ABC10-BETA, AB C8, DNA-DIRECTED RNA POLYMERASES I, II, AND III 8.3 KDA POLYPEPTIDE, RPB10
 
Molecule 11 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11
    Chains: K
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASE II SUBUNIT B11, B13.6, DNA-DIRECTED RNA POLYMERASE II 13.6 KDA POLYPEPTIDE, RPB11
 
Molecule 12 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 4
    Chains: L
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Strain: BJ5464 RPB3 HIS-BIO
    Synonym: RNA POLYMERASES I, II, AND III SUBUNIT ABC4, ABC10-ALPHA, R PB12
 
Molecule 13 - TRANSCRIPTION INITIATION FACTOR IIB
    Chains: M
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: RIL
    Expression System Vector: PET21B
    Expression System Vector Type: PLASMID
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: GENERAL TRANSCRIPTION FACTOR TFIIB, TRANSCRIPTION FACTOR E, TFIIB
 
Molecule 14 - NONTEMPLATE DNA
    Chains: N
    Engineered: YES
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synthetic: YES
 
Molecule 15 - TATA-BOX-BINDING PROTEIN
    Chains: O
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: RIL
    Expression System Vector: POPINE
    Expression System Vector Type: PLASMID
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: TATA SEQUENCE-BINDING PROTEIN, TBP, TATA-BINDING FACTOR, TA TA-BOX FACTOR, TRANSCRIPTION FACTOR D, TRANSCRIPTION INITIATION FACTOR TFIID TBP SUBUNIT
 
Molecule 16 - TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT ALPHA
    Chains: Q
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: RIL
    Expression System Vector: PETDUET-1
    Expression System Vector Type: PLASMID
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: TFIIF-ALPHA, TFIIF LARGE SUBUNIT, TRANSCRIPTION FACTOR G 10 5 KDA SUBUNIT, P105, TFG1
 
Molecule 17 - TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA
    Chains: R
    EC Number: 3.6.4.12
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: RIL
    Expression System Vector: PETDUET-1
    Expression System Vector Type: PLASMID
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: ATP-DEPENDENT HELICASE TFG2, TFIIF MEDIUM SUBUNIT, TFIIF- BETA, TRANSCRIPTION FACTOR G 54 KDA SUBUNIT, TFG2
 
Molecule 18 - NONTEMPLATE DNA
    Chains: T
    Engineered: YES
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synthetic: YES
 
Molecule 19 - TRANSCRIPTION INITIATION FACTOR IIA LARGE SUBUNIT
    Chains: U
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: RIL
    Expression System Vector: POPINE
    Expression System Vector Type: PLASMID
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: TFIIA LARGE SUBUNIT, TFIIA 32 KDA SUBUNIT, TOA1
 
Molecule 20 - TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2
    Chains: V
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: RIL
    Expression System Vector: POPINE
    Expression System Vector Type: PLASMID
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: GENERAL TRANSCRIPTION FACTOR IIA SUBUNIT 2, TFIIA 13.5 KDA SUBUNIT, TRANSCRIPTION INITIATION FACTOR IIA SMALL CHAIN, TRANSCRIPTION INITIATION FACTOR IIA SMALL SUBUNIT, TOA2
 
Molecule 21 - TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA
    Chains: W
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: RIL
    Expression System Vector: PET21
    Expression System Vector Type: PLASMID
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: TFIIE-ALPHA, FACTOR A 66 KDA SUBUNIT, TRANSCRIPTION FACTOR A LARGE SUBUNIT, TFA1
 
Molecule 22 - TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA
    Chains: X
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: RIL
    Expression System Vector: PET21
    Expression System Vector Type: PLASMID
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: TFIIE-BETA, FACTOR A 43 KDA SUBUNIT, TRANSCRIPTION FACTOR A SMALL SUBUNIT, TFA2

 Structural Features

(-) Chains, Units

  12345678910111213141516171819202122
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOQRTUVWX

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 11)

Asymmetric/Biological Unit (2, 11)
No.NameCountTypeFull Name
1MG1Ligand/IonMAGNESIUM ION
2ZN10Ligand/IonZINC ION

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWARECYS A:107 , CYS A:110 , CYS A:148 , CYS A:167 , GLN A:171BINDING SITE FOR RESIDUE ZN A 2453
02AC2SOFTWARECYS A:67 , THR A:69 , CYS A:70 , CYS A:77 , HIS A:80BINDING SITE FOR RESIDUE ZN A 2454
03AC3SOFTWAREASP A:481 , ASP A:483 , ASP A:485BINDING SITE FOR RESIDUE MG A 2455
04AC4SOFTWARECYS B:1163 , CYS B:1166 , CYS B:1182 , CYS B:1185BINDING SITE FOR RESIDUE ZN B 2224
05AC5SOFTWARECYS C:86 , CYS C:88 , CYS C:92 , CYS C:95BINDING SITE FOR RESIDUE ZN C 1266
06AC6SOFTWARECYS I:7 , CYS I:10 , CYS I:29 , THR I:31 , CYS I:32BINDING SITE FOR RESIDUE ZN I 1118
07AC7SOFTWARECYS I:75 , CYS I:78 , CYS I:103 , SER I:105 , CYS I:106BINDING SITE FOR RESIDUE ZN I 1119
08AC8SOFTWARECYS J:7 , CYS J:10 , CYS J:45 , CYS J:46BINDING SITE FOR RESIDUE ZN J 1066
09AC9SOFTWARECYS L:31 , CYS L:34 , CYS L:48 , CYS L:51BINDING SITE FOR RESIDUE ZN L 1071
10BC1SOFTWARECYS M:24 , CYS M:27 , CYS M:45 , CYS M:48BINDING SITE FOR RESIDUE ZN M 1327
11BC2SOFTWARECYS W:124 , CYS W:127 , CYS W:149BINDING SITE FOR RESIDUE ZN W 1192

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FYW)

(-) Cis Peptide Bonds  (7, 7)

Asymmetric/Biological Unit
No.Residues
1Gln A:447 -Pro A:448
2Lys A:567 -Pro A:568
3Pro E:128 -Pro E:129
4Asn G:126 -Pro G:127
5Glu O:108 -Pro O:109
6Lys O:199 -Pro O:200
7Leu Q:135 -Pro Q:136

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FYW)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FYW)

(-) Exons   (0, 0)

(no "Exon" information available for 5FYW)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:1398
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............eeeee..hhhhhhhhh..................................................eeeeeeeeee...hhhhhhhhhhhh............hhhhhhhhh..hhhhhhhhhhhhhhhh..................eeeee..eeeeee...eeeeehhhhhhhhhhhhhhhhhhhh.......hhhhheeeeeee.hhhhh..eee...eee.hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh..................hhhhhhhh....hhhhhhheee..eeeeeeee.......eeeeehhhhhhheeeee....hhhhhhhhhhhh......eeeeee...eeee..hhhhhh........eeeee.......eee.....hhh.ee..eeeee....eee.hhhhh.........eeeee...hhhhhhhhhhh..hhhh.ee....ee.....hhhhhhhhhhhh...eehhhhhhhhhhhh...........ee.....eehhhhhhhhh.....eee..............eee....eeee..hhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh...hhhhhhhhhh..ee.ee..ee..................hhhhhhee........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....ee.....eee............eeeee......hhhhhhhhhh..........hhhh..hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh....hhhhhhhhhhhh.......eeeee.......hhhhhhhhhhhhh..hhhhheeeeeeee...........hhhhhhhhhh....eeeeeeehhhhhhhh..hhhhhhhhhhhhhh..eeeee........eeeeee..hhhhhhhhhhhhhhh..........eeeeeeee..eee.....eee..eeeeeee..hhhhhhhh........ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh..ee...hhhhhhhh.....hhhhhheee.hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5fyw A    3 GQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETMDETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHFGHIDLAKPVFHVGFIAKIKKVCECVCMHCGKLLLDEHNELMRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSRGGCGNTQPTIRKDGLKLVGSWKKPELRVLSTEEILNIFKHISVKDFTSLGFNEVFSRPEWMILTCLPVPPPPVRPSISFNESQRGEDDLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHVATYMDNDIAGQPQALQKSGRPVKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLELDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIRDSGDRIDLRYSKRAGDIQLQYGWKVERHIMDNDPVLFNRQPSLHKMSMMAHRVKVIPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSEETRAELSQLCAVPLQIVSPQSNKPCMGIVQDTLCGIRKLTLRDTFIELDQVLNMLYWVPDWDGVIPTPAIIKPKPLWSGKQILSVAIPNGIHLQRFDEGTTLLSPKDNGMLIIDGQIIFGVVEKKTVGSSNGGLIHVVTREKGPQVCAKLFGNIQKVVNFWLLHNGFSTGIGDTIADGPTMREITETIAEAKKKVLDVTKEAQANLLTAKHGMTLRESFEDNVVRFLNEARDKAGRLAEVNLKDLNNVKQMVMAGSKGSFINIAQMSACVGQQSVEGKRIAFGFVDRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDNTTRNSLGNVIQFIYGEDGMDAAHIEKQSLDTIGGSDAAFEKRYRVDLLNTDHTLDPSLLESGSEILGDLKLQVLLDEEYKQLVKDRKFLREVFVDGEANWPLPVNIRRIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKNEIIQNAQRDAVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHPGEMVGVLAAQSIGEPATQMKVTSGVPRLKEILNVAKNMKTPSLTVYLEPGHAADQEQAKLIRSAIEHTTLKSVTIASEIYYDPDPRSTVIPEDEEIIQLHFSQQSPWLLRLELDRAAMNDKDLTMGQVGERIKQTFKNDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENTMLENITLRGVENIERVVMMKYDRKVPSPTGEYVKEPEWVLETDGVNLSEVMTVPGIDPTRIYTNSFIDIMEVLGIEAGRAALYKEVYNVIASDGSYVNYRHMALLVDVMTTQGGLTSVTRHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGAFDVMIDEESLVK 1452
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152 ||    171       181     ||200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070      1093      1103      1113      1123      1133      1143      1153      1163      1173 ||   1194      1204      1214      1224      1234      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374      1384      1394      1404      1414      1424      1434      1444        
                                                                                                                                                                                 154|                    187|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              1079|                                                                              1175|                                                    1243|                                                                                                                                                                                                      
                                                                                                                                                                                  164                     197                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               1093                                                                               1187                                                     1254                                                                                                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:1157
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.eeeee.....eeeeeeeeeeeeeeeeee.....eee.hhhhhhhh....eeeeeeeeeeeeee..ee.......eeeeeeee.......hhhhhhhhhhhhhhh.........eee..eeeee..eeee.....eeee......eeeeeeee...........eeeeeee.........eee........eehhhhhhhhh..hhhhhhhhhh....hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhh.........hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.........eee....hhhhhhhhhheee.........hhhhh................eee.....ee.....hhhhhhhhhhh..ee.hhh........eeeee..eeeeee.hhhhhhhhhhhhhhhh......eeeee....eeeee.....eeeeeeeee........ee..hhhhhhhhhhhhhhh.....hhhhhhhh..eeeee.hhhhhh.ee.hhhhhh....................ee..hhhhhhhhhhhhh.hhhh.hhhhhhhhhhhhhhh....hhhhhhh....eeee.......eehhhhhhhh.......eeeeeee............eeehhhhhh....eeeeeeeeee..........ee.......ee....................eee...eee.eeee.........hhhhhh.eee..ee.....eeeeeeeeeee.....eeeeeeeeeee......eeee....eee..eeehhhhh.ee.......eee..hhhhhhh.hhhhhhhhhhhhhhhhh..ee.......hhhhhhhhhhhh......ee.ee...........eeeeeeeeee...hhhhhheee.....................eeehhhhhhhhhhhhhhhhhhhhhh.....eeeeee........eee....eee.........eeeeeehhhhhhhhhhhhhh..eeeee...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw B   20 DESAPITAEDSWAVISAFFREKGLVSQQLDSFNQFVDYTLQDIICEDSTLILEQLAQISRKYEISFGKIYVTKPMVNESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYELKYELAEESEGKVFIGRLPIMLRSKNCYLSEATESDLYKLKECPFDMGGYFIINGSEKVLIAQERSAGNIVQVFKKAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSARTIKATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVEEAHDFNMKLAINAKTITSGLKYALATGNWGSSRAGVSQVLNRYTYSSTLSHLRRTNTPIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEWGMEPLEDYVPHQSPDATRVFVNGVWHGVHRNPARLMETLRTLRRKGDINPEVSMIRDIREKELKIFTDAGRVYRPLFIVEDDESLGHKELKVRKGHIAKLMATEYQDDVEEYTWSSLLNEGLVEYIDAEEEESILIAMQPEDLEPAEVDPAKRIRVSHHATTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNYNVRMDTMANILYYPQKPLGTTRAMEYLKFRELPAGQNAIVAIACYSGYNQEDSMIMNQSSIDRGLFRSLFFRSYMDQEKKYGMSITETFEKPQRTNTLRMKHGTYDKLDDDGLIAPGVRVSGEDVIIGKTTPISPDEEELGQRTAYHSKRDASTPLRSTENGIVDQVLVTTNQDGLKFVKVRVRTTKIPQIGDKFASRHGQKGTIGITYRREDMPFTAEGIVPDLIINPHAIPSRMTVAHLIECLLSKVAALSGNEGDASPFTDITVEGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAASFLKERLMEASDAFRVHICGICGLMTVIAKLNHNQFECKGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRLYTDRSRD 1223
                                    29        39        49        59        69      ||86        96       106       116       126       136 ||   |155 ||    170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460      |476       486       496     ||512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662     ||678       688       698       708     ||726       736       746       756       766       776       786       796       806       816       826       836       846       856       866       876       886       896       906       916       926       936       946       956       966       976       986       996      1006      1016      1026      1036      1046      1056      1066      1076      1086      1096      1106      1116      1126      1136      1146      1156      1166      1176      1186      1196      1206      1216       
                                                                                   76|                                                   138| 151| 157|                                                                                                                                                                                                                                                                                                             467|                         502|                                                                                                                                                            668|                                    714|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
                                                                                    84                                                    147  153  163                                                                                                                                                                                                                                                                                                              474                          509                                                                                                                                                             675                                     723                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    


Chain C from PDB  Type:PROTEIN  Length:262
                                                                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee...eeeeeee..hhhhhhhhhhhhhhh..eeeeeeeeeeee....hhhhhhhhhhhh.....hhhhh...............eeeeeeeee......eeee.hhhee......................eeeee....eeeeeeeeeee....hhhhh.....eeee...............hhhhhh..hhhhhhh.................eeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw C    4 EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQM  265
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263  


Chain D from PDB  Type:PROTEIN  Length:157
                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eee.....eee.eee..hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh...hhhhhhhhhhhhh....hhhhhhhhhhh...hhhhhhhhhhhhh...hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw D   24 AATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKTREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY  221
                                    33        43        53        63        73  ||   124       134       144       154       164       174       184       194       204       214       
                                                                               76|                                                                                                       
                                                                               118                                                                                                       


Chain E from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                      
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh............eee..hhhhhhhh.....eeee.....eehhhhhhhhhhhhhhhh..eeeeee..eehhhhhhhh......eeeeee...............eeee.hhhhhhhhhhhhh.hhhhh.ee...hhhhhhhh.....eeeeee.......eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw E    3 QENERNISRLWRAFRTVKEMVKDRGYFITQEEVELPLEDFKAKYCDSMGRPQRKMMSFQANPTEESISKFPDMGSLWVEFCDEPSVGVKTMKTFVIHIQEKNFQTGIFVYQNNITPSAMKLVPSIPPATIETFNEAALVVNITHHELVPKHIRLSSDEKRELLKRYRLKESQLPRIQRADPVALYLGLKRGEVVKIIRKSETSGRYASYRICM  215
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212   


Chain F from PDB  Type:PROTEIN  Length:83
                                                                                                                    
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhh......hhhhhhhhhhhhhhhhhh............hhhhhhhhhhhh.....eeeee.....eeeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                5fyw F   72 KAIPKDQRATTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKKIPLVIRRYLPDGSFEDWSVEELIVD  154
                                    81        91       101       111       121       131       141       151   


Chain G from PDB  Type:PROTEIN  Length:171
                                                                                                                                                                                                            
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeehhhhh..hhhhhhhhhhhhhhh..ee...eeeeeee..........ee......eeeeeeeeeeee.....eeeeeeeeeee..eeeeee..eeee.hhhhh....eee......eee....ee....eeeeeeeeeeee..eeeeeee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw G    1 MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLEEVEGSCTGKFGYILCVLDYDNIDIQRGRILPTDGSAEFNVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLTFNAGSNPPSYQSSEDVITIKSRIRVKIEGCISQVSSIHAIGSIKEDYLGAI  171
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170 


Chain H from PDB  Type:PROTEIN  Length:136
                                                                                                                                                                         
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeeeee......eeeeeeee......eeeeeee..........eeeee...........................eeeeeeeeeeeeee..eeeeeeee..eeeeeeee..........eeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw H    2 SNTLFDDIFQVSEVDPGRYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIASSLNLATRSWRPPQAGDRSLADDYDYVMYGTAYKFEEVSKDLIAVYYSFGGLLMRLEGNYRNLNNLKQENAYLLIRR  146
                                    11        21        31        41        51        61   ||   80        90       100       110       120       130       140      
                                                                                          65|                                                                       
                                                                                           75                                                                       


Chain I from PDB  Type:PROTEIN  Length:116
                                                                                                                                                     
               SCOP domains -------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeeee....eeeee......eee....eeee...............hhhhh....ee...........eeeee...........eeeee.....eee...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw I    2 TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNK  117
                                    11        21        31        41        51        61        71        81        91       101       111      


Chain J from PDB  Type:PROTEIN  Length:65
                                                                                                  
               SCOP domains ----------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhhhh.hhhhhhhhhh..hhhhhhhhhhh..hhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                5fyw J    1 MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKFLRYNP   65
                                    10        20        30        40        50        60     


Chain K from PDB  Type:PROTEIN  Length:112
                                                                                                                                                 
               SCOP domains ---------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh........eeeee......eeeeeee..hhhhhhhhhhhhhhh..eeeeeee.......eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------- Transcript
                5fyw K    1 MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAAYKVEHPFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKTNFETEWNLQ  112
                                    10        20        30        40        50        60        70        80        90       100       110  


Chain L from PDB  Type:PROTEIN  Length:45
                                                                              
               SCOP domains --------------------------------------------- SCOP domains
               CATH domains --------------------------------------------- CATH domains
               Pfam domains --------------------------------------------- Pfam domains
         Sec.struct. author ....ee........................ee.......eee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------- PROSITE
                 Transcript --------------------------------------------- Transcript
                5fyw L   26 TLKYICAECSSKLSLSRTDAVRCKDCGHRILLKARTKRLVQFEAR   70
                                    35        45        55        65     


Chain M from PDB  Type:PROTEIN  Length:231
                                                                                                                                                                                                                                                                        
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................eeee....eeee.....eee.....hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh....hhhhhhhhh...hhhhhhhhhhhhhhhhhh....hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh.....hhhhhhhh..hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw M   16 PNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSQNLTYIPRFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQTLQVTEGTIKSGYKILYEHRDKLVDP  326
                                    25        35        45        55  ||   130       140       150       160       170       180       190       200       210       235       245       255       265       275       285       295       305       315       325 
                                                                     58|                                                                                           218|                                                                                            
                                                                     124                                                                                            234                                                                                            


Chain N from PDB  Type:DNA  Length:47
                                                                                
                5fyw N    8 AGTAGCACGCTGTGTATATAATAGTGTGTTGTACAGCACAACTGCGC   71
                                    17        27        37    ||  64       
                                                             42|           
                                                              60           


Chain O from PDB  Type:PROTEIN  Length:180
                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeeeeeeeee.....hhhhhhhhh..ee........eeeee....eeeee....eeeeeee.hhhhhhhhhhhhhhhhhhhh.....eeeeeeeeeeeee.....hhhhhhhhh...ee........eeee......eeee....eeeeeee.hhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5fyw O   61 SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKM  240
                                    70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240


Chain Q from PDB  Type:PROTEIN  Length:148
                                                                                                                                                                                     
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhh.eeeeeeee.hhhhhhhheeeeeee................eeee.....eee...hhhhhhhhhh...eeee....eeeeee........eeeee.....eeeee..eeeeeeee......hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw Q   21 FIKRDRMRRNFLRMREYNEFPLRAIPKEDLENMRTHLLKFQSKKKINPVTDFHLPVRLHRKRKTRQLKVLDENAKKLRFEEFYPWVMEDFYNTWVGSYEAGNSDSYVLLSVEDDGSFTMIPADKVYKFTARNKYATLTIDEAEKRMDK  415
                                    30    || 101       111       121       131       141||     335       345       355|      367       377       387       397       407        
                                         35|                                          142|                         355|                                                         
                                          97                                           327                          358                                                         


Chain R from PDB  Type:PROTEIN  Length:199
                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeee.hhhhhhhhh..eeeee..eeeee.....eeeeeeee......eeeeee....eeeeeeee.eeeeee.hhhhhhhhhhhh....eee...hhhhhhhhh..............hhhhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhh.eee.......eee..hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw R   58 DLDLERSNRQVWLVRLPMFLAEKWRLGKIRINKSKITLLLNEPHEYDLELTKKVVENEYVFTEQTIPKKTAIVGTVCHECQVMPYHKIVEQRRNIVKERITTLDETVGVTMSHTGMSMRSDNSNFLKVMPKKEILDYLFKLFDEYDYWSLKGLKERTRQPEAHLKECLDKVATLVKKGPYAFKYTLRKEEERKATLGEL  370
                                    67        77    ||  96  ||   108 ||    124       134   ||  212       222   ||  238     ||252       262       272       295       305       315       325       335       345      |361         
                                                   82|     99|     110|                  138|                226|        244|                            280|                                                       352|           
                                                    92     102      117                   207                 233         249                             294                                                        359           


Chain T from PDB  Type:DNA  Length:47
                                                                                
                5fyw T    2 GCGCAGTTGTGCTATACAACACACTATTATATACACAGCGTGCTACT   65
                                    11   ||   38        48        58       
                                        15|                                
                                         33                                


Chain U from PDB  Type:PROTEIN  Length:92
                                                                                                                             
               SCOP domains -------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeeeee..eeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                5fyw U    2 SNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEWV  286
                                    11        21        31        41     ||244       254       264       274       284  
                                                                        47|                                             
                                                                        241                                             


Chain V from PDB  Type:PROTEIN  Length:100
                                                                                                                                     
               SCOP domains ---------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhh...eeeeeeeeeeeeee..eeeeeeeeeeeee..eeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                5fyw V    5 GYYELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVKGNLDTYGFCDDVWTFIVKNCQVTVESVISVDKLRIVACNSK  119
                                    14        24        34        44        54        64        74        84   ||  109       119
                                                                                                              88|               
                                                                                                              104               


Chain W from PDB  Type:PROTEIN  Length:168
                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.....hhhhhhh..hhhhhhhhhhhhhhh...eeeeeee.......eeeeeee.hhhhhhhhhhhhhhhhhhhhhh.ee......eehhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5fyw W    6 DDIVKNLLKFVVRGFYGGSFVLVLDAILFHSVLAEDDLKQLLSINKTELGPLIARLRSDRLISIHKQREYPPNSKSVERVYYYVKYPHAIDAIKWKVHQVVQRLKDGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVEKQDKLNRLMDQIQPIIDSLKKIDD  191
                                    15        25        35        45        55        65        75        85        95       105     ||124       134       144       154   ||  173       183        
                                                                                                                                   111|                                  158|                       
                                                                                                                                    121                                   168                       


Chain X from PDB  Type:PROTEIN  Length:143
                                                                                                                                                                                
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh...hhhhhhhhh....hhhhhhhhhhh..eee......eee.hhhhhhhhhhhhhhhh...hhhhhhhhh.hhhhhhhhhhhhh...eee.......eee.....hhhhhhhh....hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fyw X  123 HDSSKLLWATEYIQKKGKPVLVNELLDYLSMKKDDKVIELLKKLDRIEFDPKKGTFKYLHSPSELLKLLRSQVTFKGISCKDLKDGWPQCDETINQLEEDSKILVLRTKKDKTPRYVWYNSGDEEFVKMWENVQAELPRKLQD  280
                                   132       142       152       162       172       187       197       207       217       227       237       247 ||    263   ||  277   
                                                                                    181|                                                           249|        267|        
                                                                                     187                                                            256         272
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FYW)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FYW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FYW)

(-) Gene Ontology  (101, 350)

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  5fyw
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
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    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
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Access by UniProt ID/Accession number
  RPAB1_YEAST | P20434
    Comparative Protein Structure Models: ModBase
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  RPAB2_YEAST | P20435
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  RPAB3_YEAST | P20436
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    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  RPAB4_YEAST | P40422
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    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  RPAB5_YEAST | P22139
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  RPB11_YEAST | P38902
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  RPB1_YEAST | P04050
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  RPB2_YEAST | P08518
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  RPB3_YEAST | P16370
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  RPB4_YEAST | P20433
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  RPB7_YEAST | P34087
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  RPB9_YEAST | P27999
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  T2AG_YEAST | P32774
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  T2EA_YEAST | P36100
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  T2EB_YEAST | P36145
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  T2FA_YEAST | P41895
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  T2FB_YEAST | P41896
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  TBP_YEAST | P13393
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  TF2B_YEAST | P29055
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  TOA1_YEAST | P32773
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  2.7.7.6
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
  3.6.4.12
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  RPAB1_YEAST | P20434
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPAB2_YEAST | P20435
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPAB3_YEAST | P20436
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPAB4_YEAST | P40422
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPAB5_YEAST | P22139
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPB11_YEAST | P38902
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPB1_YEAST | P04050
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPB2_YEAST | P08518
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPB3_YEAST | P16370
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPB4_YEAST | P20433
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPB7_YEAST | P34087
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RPB9_YEAST | P27999
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  T2AG_YEAST | P32774
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  T2EA_YEAST | P36100
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  T2EB_YEAST | P36145
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  T2FA_YEAST | P41895
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  T2FB_YEAST | P41896
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  TBP_YEAST | P13393
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  TF2B_YEAST | P29055
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  TOA1_YEAST | P32773
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RPAB1_YEAST | P20434: 1dzf 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4c2m 4c3h 4c3i 4c3j 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 4ym7 5c3e 5c44 5c4a 5c4j 5c4x 5fj8 5fj9 5fja 5fmf 5fz5 5g5l 5ip7 5ip9 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61 5sva 5u5q
        RPAB2_YEAST | P20435: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4c2m 4c3h 4c3i 4c3j 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 4ym7 5c3e 5c44 5c4a 5c4j 5c4x 5fj8 5fj9 5fja 5fmf 5fz5 5g5l 5ip7 5ip9 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61 5sva 5u5q
        RPAB3_YEAST | P20436: 1a1d 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4c2m 4c3h 4c3i 4c3j 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 4ym7 5c3e 5c44 5c4a 5c4j 5c4x 5fj8 5fj9 5fja 5fmf 5fz5 5g5l 5ip7 5ip9 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61 5sva 5u5q
        RPAB4_YEAST | P40422: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4c2m 4c3h 4c3i 4c3j 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 4ym7 5c3e 5c44 5c4a 5c4j 5c4x 5fj8 5fj9 5fja 5fmf 5fz5 5g5l 5ip7 5ip9 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61 5sva 5u5q
        RPAB5_YEAST | P22139: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4c2m 4c3h 4c3i 4c3j 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 4ym7 5c3e 5c44 5c4a 5c4j 5c4x 5fj8 5fj9 5fja 5fmf 5fz5 5g5l 5ip7 5ip9 5lmx 5m3f 5m3m 5m5w 5m5x 5m5y 5m64 5n5y 5n5z 5n60 5n61 5sva 5u5q
        RPB11_YEAST | P38902: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 5c3e 5c44 5c4a 5c4j 5c4x 5fmf 5fz5 5ip7 5ip9 5sva 5u5q
        RPB1_YEAST | P04050: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2l0i 2lo6 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4gwq 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 5c3e 5c44 5c4a 5c4j 5c4x 5fmf 5fz5 5ip7 5ip9 5sva 5u5q
        RPB2_YEAST | P08518: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 5c3e 5c44 5c4a 5c4j 5c4x 5fmf 5fz5 5ip7 5ip9 5sva 5u5q
        RPB3_YEAST | P16370: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 5c3e 5c44 5c4a 5c4j 5c4x 5fmf 5fz5 5ip7 5ip9 5sva 5u5q
        RPB4_YEAST | P20433: 1nt9 1pqv 1wcm 1y14 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2ja5 2ja6 2ja7 2ja8 2r7z 2r92 2r93 2vum 3fki 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3po2 3po3 3qt1 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4v1n 4v1o 5c3e 5c44 5c4a 5c4x 5fmf 5fz5 5ip7 5ip9 5sva 5u5q
        RPB7_YEAST | P34087: 1nt9 1pqv 1wcm 1y14 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2ja5 2ja6 2ja7 2ja8 2r7z 2r92 2r93 2vum 3fki 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3po2 3po3 3qt1 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4v1n 4v1o 5c3e 5c44 5c4a 5c4x 5fmf 5fz5 5ip7 5ip9 5sva 5u5q
        RPB9_YEAST | P27999: 1i3q 1i50 1i6h 1k83 1nik 1nt9 1pqv 1r5u 1r9s 1r9t 1sfo 1twa 1twc 1twf 1twg 1twh 1wcm 1y1v 1y1w 1y1y 1y77 2b63 2b8k 2e2h 2e2i 2e2j 2ja5 2ja6 2ja7 2ja8 2nvq 2nvt 2nvx 2nvy 2nvz 2r7z 2r92 2r93 2vum 2yu9 3cqz 3fki 3gtg 3gtj 3gtk 3gtl 3gtm 3gto 3gtp 3gtq 3h3v 3hou 3hov 3how 3hox 3hoy 3hoz 3i4m 3i4n 3j0k 3j1n 3k1f 3k7a 3m3y 3m4o 3po2 3po3 3qt1 3rzd 3rzo 3s14 3s15 3s16 3s17 3s1m 3s1n 3s1q 3s1r 3s2d 3s2h 4a3b 4a3c 4a3d 4a3e 4a3f 4a3g 4a3i 4a3j 4a3k 4a3l 4a3m 4a93 4bbr 4bbs 4bxx 4bxz 4by1 4by7 4v1m 4v1n 4v1o 4x67 4x6a 4y52 4y7n 5c3e 5c44 5c4a 5c4j 5c4x 5fmf 5fz5 5ip7 5ip9 5sva 5u5q
        T2AG_YEAST | P32774: 1nh2 1rm1 1ytf 5fmf 5fz5 5sva
        T2EA_YEAST | P36100: 5fmf 5fz5 5sva
        T2EB_YEAST | P36145: 5fmf 5fz5 5sva
        T2FA_YEAST | P41895: 5fmf 5fz5 5ip7 5ip9 5sva
        T2FB_YEAST | P41896: 4v1n 4v1o 5fmf 5fz5 5sva
        TBP_YEAST | P13393: 1ngm 1nh2 1rm1 1tba 1tbp 1ytb 1ytf 4b0a 4v1n 4v1o 5fmf 5fz5 5sva
        TF2B_YEAST | P29055: 3k1f 3k7a 4bbr 4bbs 4v1n 4v1o 5fmf 5fz5 5sva
        TOA1_YEAST | P32773: 1nh2 1rm1 1ytf 5fmf 5fz5 5sva

(-) Related Entries Specified in the PDB File

5fz5 TRANSCRIPTION INITIATION COMPLEX STRUCTURES ELUCIDATE DNA OPENING (CC) RELATED ID: EMD-3378 RELATED DB: EMDB TRANSCRIPTION INITIATION COMPLEX STRUCTURES ELUCIDATE DNA OPENING (CC)