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(-) Description

Title :  CRYSTAL STRUCTURE OF PASTA DOMAINS 3 AND 4 OF MYCOBACTERIUM TUBERCULOSIS PROTEIN KINASE B
 
Authors :  D. M. Prigozhin, Tb Structural Genomics Consortium (Tbsgc)
Date :  29 Sep 15  (Deposition) - 14 Sep 16  (Release) - 09 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Kinase, Extracellular Sensor Domain, Peptidoglycan Binding, Structural Genomics, Tb Structural Genomics Consortium, Tbsgc, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. M. Prigozhin, K. G. Papavinasasundaram, C. E. Baer, K. C. Murphy, A. Moskaleva, T. Y. Chen, T. Alber, C. M. Sassetti
Structural And Genetic Analyses Of The Mycobacterium Tuberculosis Protein Kinase B Sensor Domain Identify A Potential Ligand-Binding Site.
J. Biol. Chem. V. 291 22961 2016
PubMed-ID: 27601474  |  Reference-DOI: 10.1074/JBC.M116.731760

(-) Compounds

Molecule 1 - SERINE/THREONINE-PROTEIN KINASE PKNB
    Chains: A
    EC Number: 2.7.11.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 491-626
    Gene: PKNB, RV0014C, MTCY10H4.14C
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / H37RV)
    Organism Taxid: 83332
    Strain: ATCC 25618 / H37RV

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5E0Z)

(-) Sites  (0, 0)

(no "Site" information available for 5E0Z)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5E0Z)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Asn A:538 -Pro A:539
2Asn A:607 -Pro A:608

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5E0Z)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5E0Z)

(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:136
                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee.......hhhhhhhhhhhhh...eeeeee........eeeee.....eee....eeeeee...eee.......hhhhhhhhhhh......eee......hhhhh..eeeee.....eee....eeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5e0z A 491 GPATKDIPDVAGQTVDVAQKNLNVYGFTKFSQASVDSPRPAGEVTGTNPPAGTTVPVDSVIELQVSKGNQFVMPDLSGMFWVDAEPRLRALGWTGMLDKGADVDAGGSQHNRVVYQNPPAGTGVNRDGIITLRFGQ 626
                                   500       510       520       530       540       550       560       570       580       590       600       610       620
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5E0Z)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5E0Z)

(-) Gene Ontology  (27, 27)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Asn A:538 - Pro A:539   [ RasMol ]  
    Asn A:607 - Pro A:608   [ RasMol ]  
 

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  5e0z
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  PKNB_MYCTU | P9WI81
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PKNB_MYCTU | P9WI81: 1mru 1o6y 2fum 2kud 2kue 2kuf 2kui 3f61 3f69 5e0y 5e10 5e12

(-) Related Entries Specified in the PDB File

3ouv 5e0y 5e10 5e12