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Title :   STRUCTURAL AND DYNAMIC BASIS FOR LOW AFFINITY-HIGH SELECTIVITY BINDING OF L-GLUTAMINE BY THE GLN-RIBOSWITCH

Authors :   A. Ren, D. Patel

Date :   25 Aug 15 (Deposition) - 23 Dec 15 (Release) - 05 Apr 17 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.10

Chains :   Asym. Unit : A,B,C,G
Biol. Unit 1: A,G  (1x)
Biol. Unit 2: B,C  (1x)

Keywords :   Riboswitch, L-Glutamine, Free-Form, Rna, Rna Binding Protein-Rna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Ren, Y. Xue, A. Peselis, A. Serganov, H. M. Al-Hashimi, D. J. Patel
Structural And Dynamic Basis For Low-Affinity, High-Selectivity Binding Of L-Glutamine By The Glutamine Riboswitch.
Cell Rep V. 13 1800 2015
PubMed-ID: 26655897 | Reference-DOI: 10.1016/J.CELREP.2015.10.062

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

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Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:RNA  Length:58
                                                                                         
                  5ddo A  1 CGUUGGCCCAGGAAACUGGGUAGUAAGGUCCAUUGCACUCCGGGCCUGAAGCAACGCU 61
                                    10        20||      33        43        53        
                                               21|                                    
                                                25

Chain B from PDB  Type:RNA  Length:58
                                                                                         
                  5ddo B  1 CGUUGGCCCAGGAAACUGGGUAGUAAGGUCCAUUGCACUCCGGGCCUGAAGCAACGCU 61
                                    10        20||      33        43        53        
                                               21|                                    
                                                25

Chain C from PDB  Type:PROTEIN  Length:87
                                                                                                                      
               SCOP domains --------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee......hhhhhhhhhhhhhhhhh.eeeee..........eeeee.hhhhhhhhhhhhh..hhhhh..eeee...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------- Transcript
                  5ddo C  6 TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSD 92
                                    15        25        35        45        55        65        75        85

Chain G from PDB  Type:PROTEIN  Length:86
                                                                                                                     
               SCOP domains -------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee......hhhhhhhhhhhhhhhhh.eeeeee........eeeeee..hhhhhhhhhhh...ee..ee.eeee...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                  5ddo G  7 RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSD 92
                                    16        26        36        46        56        66        76        86

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Classification and Annotation

SCOP Domains (0, 0)

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Gene Ontology (17, 17)

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		Arg C:7 - Pro C:8	[ RasMol ]
		Thr C:6 - Arg C:7	[ RasMol ]

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