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(-) Description

Title :  E. COLI MAZF FORM II
 
Authors :  V. Zorzini, R. Loris
Date :  15 Jul 15  (Deposition) - 06 Apr 16  (Release) - 08 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Toxin-Antitoxin, Mrna Interferase, Ribonuclease, Persistence, Bacterial Stress Response, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  V. Zorzini, A. Mernik, J. Lah, Y. G. Sterckx, N. De Jonge, A. Garcia-Pino, H. De Greve, W. Versees, R. Loris
Substrate Recognition And Activity Regulation Of The Escherichia Coli Mrna Endonuclease Mazf.
J. Biol. Chem. V. 291 10950 2016
PubMed-ID: 27026704  |  Reference-DOI: 10.1074/JBC.M116.715912

(-) Compounds

Molecule 1 - ENDORIBONUCLEASE MAZF
    Chains: A, B
    EC Number: 3.1.27.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: MAZF, CHPA, CHPAK, B2782, JW2753
    Organism Scientific: ESCHERICHIA COLI K-12
    Organism Taxid: 83333
    Synonym: TOXIN MAZF,MRNA INTERFERASE MAZF

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5CKB)

(-) Sites  (0, 0)

(no "Site" information available for 5CKB)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5CKB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5CKB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5CKB)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 5CKB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeee..........eeeee..hhhhhhhhh.eeeeeee........eeee......eeee....eeehhhhhh.eeeee.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ckb A   2 VSRYVPDMGDLIWVDFKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG 111
                                    11     || 24        34        44        54        64        74        84        94       104       
                                          17|                                                                                          
                                           21                                                                                          


Chain B from PDB  Type:PROTEIN  Length:100
                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeee.....eeee..hhhhhhhhh.eeeeeee........eee........eee.hhheeehhhhhh.eeeee.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 5ckb B   2 VSRYVPDMGDLIWVDFHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG 111
                                    11     || 31        41        51        61        71        81        91       101       111
                                          17|                                                                                   
                                           28
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5CKB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5CKB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5CKB)

(-) Gene Ontology  (17, 17)

Asymmetric/Biological Unit(hide GO term definitions)

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  MAZF_ECOLI | P0AE70
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MAZF_ECOLI | P0AE70: 1ub4 3nfc 5ck9 5ckd 5cke 5ckf 5ckh 5co7 5cqx 5cqy 5cr2

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5CKB)