5C52 - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   PROBING THE STRUCTURAL AND MOLECULAR BASIS OF NUCLEOTIDE SELECTIVITY BY HUMAN MITOCHONDRIAL DNA POLYMERASE GAMMA

Authors :   C. D. Sohl, M. R. Szymanski, A. C. Mislak, C. K. Shumate, S. Amiralaei, R. F. Schinazi, K. S. Anderson, Y. W. Yin

Date :   19 Jun 15 (Deposition) - 11 May 16 (Release) - 11 May 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.64

Chains :   Asym./Biol. Unit : A,B,C,P,T

Keywords :   Nucleoside Reverse Transcriptase Inhibitors (Nrtis), Hiv Reverse Transcriptase (Rt), Human Mitochondrial Dna Polymerase, Transferase- Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. D. Sohl, M. R. Szymanski, A. C. Mislak, C. K. Shumate, S. Amiralaei, R. F. Schinazi, K. S. Anderson, Y. W. Yin
Probing The Structural And Molecular Basis Of Nucleotide Selectivity By Human Mitochondrial Dna Polymerase Gamma.
Proc. Natl. Acad. Sci. Usa V. 112 8596 2015
PubMed-ID: 26124101 | Reference-DOI: 10.1073/PNAS.1421733112

Molecule 1 - DNA POLYMERASE SUBUNIT GAMMA-1
	Chains	:	A
	EC Number	:	2.7.7.7
	Engineered	:	YES
	Expression System	:	INSECT CELL EXPRESSION VECTOR PTIE1
	Expression System Taxid	:	266783
	Gene	:	POLG, MDP1, POLG1, POLGA
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	MITOCHONDRIAL DNA POLYMERASE CATALYTIC SUBUNIT,POLG-ALPHA

Molecule 2 - DNA POLYMERASE SUBUNIT GAMMA-2, MITOCHONDRIAL
	Chains	:	B, C
	EC Number	:	2.7.7.7
	Engineered	:	YES
	Expression System	:	INSECT CELL EXPRESSION VECTOR PTIE1
	Expression System Taxid	:	266783
	Gene	:	POLG2, MTPOLB
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	DNA POLYMERASE GAMMA ACCESSORY 55 KDA SUBUNIT,P55, MITOCHONDRIAL DNA POLYMERASE ACCESSORY SUBUNIT,MTPOLB,POLG-BETA

Molecule 3 - DNA (26-MER)
	Chains	:	T
	Engineered	:	YES
	Organism Scientific	:	DNA LAUNCH VECTOR PDE-GFP2
	Organism Taxid	:	415098
	Synthetic	:	YES

*Molecule 4 - DNA (5'- D(APAPAPAPCPGPAPGPGPGPCPCPAPGPTPGPCPCPGPTPAPC)- 3')*
	Chains	:	P
	Engineered	:	YES
	Organism Scientific	:	DNA LAUNCH VECTOR PDE-GFP2
	Organism Taxid	:	415098
	Synthetic	:	YES

		1	2	3	4	5
Asymmetric/Biological Unit	:	A	B	C	P	T

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (3, 4)

No.	Name	Count	Type	Full Name
1	1RY	1	Ligand/Ion	[[(2R,5S)-5-(4-AZANYL-5-FLUORANYL-2-OXIDANYLIDENE-PYRIMIDIN-1-YL)-1,3-OXATHIOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL] PHOSPHONO HYDROGEN PHOSPHATE
2	DOC	1	Mod. Nucleotide	2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE
3	MG	2	Ligand/Ion	MAGNESIUM ION

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:853 , VAL A:891 , ASP A:892 , SER A:893 , GLN A:894 , GLU A:895 , ARG A:943 , LYS A:947 , TYR A:951 , GLN A:1102 , ASP A:1135 , MG A:1302 , MG A:1303 , DOC P:24 , DG T:4 , DA T:5	binding site for residue 1RY A 1301
2	AC2	SOFTWARE	ASP A:890 , ASP A:1135 , 1RY A:1301 , DOC P:24	binding site for residue MG A 1302
3	AC3	SOFTWARE	ASP A:890 , VAL A:891 , ASP A:892 , ASP A:1135 , 1RY A:1301	binding site for residue MG A 1303
4	AC4	SOFTWARE	ARG A:853 , LEU A:860 , ALA A:862 , ASN A:864 , 1RY A:1301 , MG A:1302 , DT P:22 , DA T:5 , DT T:6	binding site for Di-nucleotide DA P 23 and DOC P 24

(no "SS Bond" information available for 5C52)

Asymmetric/Biological Unit

No.	Residues
1	Met A:78	-	Leu A:79
2	Gly A:91	-	Gly A:92
3	Glu A:93	-	Met A:94
4	His A:110	-	Gly A:111
5	Gly A:132	-	Asp A:133
6	Gly A:206	-	Thr A:207
7	Gln A:262	-	Glu A:263
8	Gly A:286	-	Ser A:287
9	Ser A:475	-	Gly A:476
10	Phe A:495	-	Lys A:496
11	Lys A:502	-	Val A:503
12	Ser A:593	-	Leu A:594
13	Leu A:594	-	Gln A:595
14	Ser A:642	-	Ala A:643
15	Tyr A:739	-	Asn A:740
16	Leu A:752	-	Pro A:753
17	Pro A:765	-	Phe A:766
18	Thr A:778	-	Leu A:779
19	Gly A:782	-	Pro A:783
20	Pro A:783	-	Gly A:784
21	Tyr A:831	-	Asp A:832
22	Thr A:849	-	Ile A:850
23	Ile A:850	-	Thr A:851
24	Asp A:892	-	Ser A:893
25	Thr A:938	-	Val A:939
26	Val A:939	-	Gly A:940
27	Ser A:942	-	Arg A:943
28	Thr A:989	-	Lys A:990
29	Pro A:1073	-	Val A:1074
30	Val A:1074	-	Leu A:1075
31	Leu A:1075	-	Gly A:1076
32	Gln A:1089	-	Glu A:1090
33	Gly A:1169	-	Leu A:1170
34	Gln A:1214	-	Gly A:1215
35	Leu B:204	-	Pro B:205
36	Arg B:389	-	Gly B:390
37	Gly B:390	-	Pro B:391
38	Leu B:393	-	Glu B:394
39	Met B:421	-	Gln B:422
40	His C:96	-	Pro C:97
41	Arg C:122	-	Glu C:123
42	Phe C:293	-	Pro C:294
43	Pro C:316	-	Gly C:317
44	Gly C:317	-	Asn C:318
45	Leu C:418	-	Glu C:419
46	Glu C:419	-	Thr C:420

(no "SAP(SNP)/Variant" information available for 5C52)

(no "PROSITE Motif" information available for 5C52)

(no "Exon" information available for 5C52)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:983
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................hhhhhhhhhhhhhhh.......................hhhhhhhhhhhhhhhhhhhhhhhhhh..............eeeeehhhhh.eee.......ee.eeee.hhhh..eeeeeee....eeeee............................eeee.hhhhhhhhhhhhh.......eeeehhhhhhhhhh.hhhhhhhhh.................hhhhhhhhhh..........hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh....eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhh.......................................hhhhhhhhhhhhhh...............hhhhhhh.....................hhhhhhh.......................................hhhhhhhhhhh..................................................hhhhhhhhhhhhhhhhhhhhhhhhh...ee......hhhhhh.........eeee....eeee....eee.................hhhhhh.....eeeeeee...hhhhhhhhhhhhhhh......hhhhhhh........hhhhhhhh.....hhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhh.......................................hhhhhhhh...........................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeee..eeeeeee..hhhhhhhhhhhhhhhhhhhhhhh...............eeee.......................................... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5c52 A   78 MLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAANLLLQAQLPPKPPAWAWAEGWTRYGPEGEAVPVAIPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWCSQRLVEERYSWTSQLSPADLIPLEVQEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSMHMAISGLSSFQRSLWIAAKAISSWDWLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEVFQQQLPLFLERCPHPVTLAGMLEMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDLEWDLQEFKQKKAKKVKKEPATALGPCSEEEEFQQDVMARACLQKLKGTTELLPKRPQHLPGHPGWYRKLCPRLDDPAWTPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLNLAKLPTGTTLESAGVVCPYRAIESLYRKHCLEPYNDVDIPGCWFFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVIRHPDYDEEGLYGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLESIATSDIPRTPVLGCCISRALEPSAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTK 1228
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247 ||    269       279       289       299       309      |343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503      |532       542       552       562       572       582       592       602       612       622||     638       648       658   ||  743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983      1025      1035      1045      1055      1065      1075      1085      1095      1105      1115      1125      1135      1145      1155      1165      1175      1185      1195      1205      1215      1225   
                                                                                                                                                                                                     249|                                                   316|                                                                                                                                                                      510|                                                                                          623|                             662|                                                                                                                                                                                                                                                           992|                                                                                                                                                                                                           
                                                                                                                                                                                                      262                                                    341                                                                                                                                                                       530                                                                                           630                              738                                                                                                                                                                                                                                                           1025

Chain B from PDB  Type:PROTEIN  Length:363
                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhh.........hhhhhhhh.....hhhhhhhhhhhhhhhhhh.......eee...............hhhhhhhhhhhhhhh......eeeeeeeeeeeee....eeeeeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhh........eeeeee.....eeeeeeeee..eeeeeeeeeee.hhhhhhhh..hhhhhhee....ee..eeeeeeeehhhhhhhhhhhh.......................eeeee........hhhhhhhhhhhhhh...eeee.......hhhhhhhhhhh....eeeeehhhhhhh..eeeee.....eeeehhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5c52 B   68 ALLEICQRRHFLSGSKQQLSRDSLLSGCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGGKLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSPSNFSSSDCQDEEGRKGNKLYYNFPWGKELIETLWNLGDHELLHMYPGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQTRKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMHISKLKDFLIKYISSAKNV  485
                                    77        87        97       107       117       127       179       189       199       209       219 ||    236       246       256       266       276       286       296       306       316       326       336       346       362       372       382       392       402       412       422       432       442       452       462       472       482   
                                                                                              136|                                       221|                                                                                                                           355|                                                                                                                           
                                                                                               179                                        229                                                                                                                            362

Chain C from PDB  Type:PROTEIN  Length:358
                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhh......hhhhhhhhhhhhhhhhhh.......eee................hhhhhhh..hhhhhh.....eeeeeeeeeeeee....eeeeeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh......eeeeee.......eeeeee......eeeeeeeee.hhhhhh..........ee....ee..eeeeeeeehhhhhhhhhhhhh................eeeee....hhhhhhhhhhhhhhhhh....eee.........hhhhhhhhhhh...eeeee.hhhhh..eeeee......eeeee..hhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5c52 C   67 LALLEICQRRHFLSGSKQQLSRDSLLSGCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPKLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSPSNFSSSDCQDEEGRKGNKLYYNFPWGKELIETLWNLGDHELLHMYPGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMHISKLKDFLIKYISSAKNV  485
                                    76        86        96       106       116       126       136||     188       198       208       218||     235       245       255       265       275       285       295       305       315       325       335       345       355|      377       387       397       407       417       427       437       447       457       467       477        
                                                                                                137|                                    219|                                                                                                                             355|                                                                                                                     
                                                                                                 180                                     227                                                                                                                              368

Chain P from PDB  Type:DNA  Length:22
                                                       
                5c52 P    3 AAAACGAGGGCCAGTGCCGTAc   24
                                    12        22 |
                                                24-DOC

Chain T from PDB  Type:DNA  Length:26
                                                           
                5c52 T    1 AGCGATACGGCACTGGCCCTCGTTTT   26
                                    10        20

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 5C52)

(no "CATH Domain" information available for 5C52)

(no "Pfam Domain" information available for 5C52)

Asymmetric/Biological Unit(hide GO term definitions)

Asymmetric/Biological Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
		1RY	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		DOC	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Arg B:389 - Gly B:390	[ RasMol ]
		Arg C:122 - Glu C:123	[ RasMol ]
		Asp A:892 - Ser A:893	[ RasMol ]
		Gln A:1089 - Glu A:1090	[ RasMol ]
		Gln A:1214 - Gly A:1215	[ RasMol ]
		Gln A:262 - Glu A:263	[ RasMol ]
		Glu A:93 - Met A:94	[ RasMol ]
		Glu C:419 - Thr C:420	[ RasMol ]
		Gly A:1169 - Leu A:1170	[ RasMol ]
		Gly A:132 - Asp A:133	[ RasMol ]
		Gly A:206 - Thr A:207	[ RasMol ]
		Gly A:286 - Ser A:287	[ RasMol ]
		Gly A:782 - Pro A:783	[ RasMol ]
		Gly A:91 - Gly A:92	[ RasMol ]
		Gly B:390 - Pro B:391	[ RasMol ]
		Gly C:317 - Asn C:318	[ RasMol ]
		His A:110 - Gly A:111	[ RasMol ]
		His C:96 - Pro C:97	[ RasMol ]
		Ile A:850 - Thr A:851	[ RasMol ]
		Leu A:1075 - Gly A:1076	[ RasMol ]
		Leu A:594 - Gln A:595	[ RasMol ]
		Leu A:752 - Pro A:753	[ RasMol ]
		Leu B:204 - Pro B:205	[ RasMol ]
		Leu B:393 - Glu B:394	[ RasMol ]
		Leu C:418 - Glu C:419	[ RasMol ]
		Lys A:502 - Val A:503	[ RasMol ]
		Met A:78 - Leu A:79	[ RasMol ]
		Met B:421 - Gln B:422	[ RasMol ]
		Phe A:495 - Lys A:496	[ RasMol ]
		Phe C:293 - Pro C:294	[ RasMol ]
		Pro A:1073 - Val A:1074	[ RasMol ]
		Pro A:765 - Phe A:766	[ RasMol ]
		Pro A:783 - Gly A:784	[ RasMol ]
		Pro C:316 - Gly C:317	[ RasMol ]
		Ser A:475 - Gly A:476	[ RasMol ]
		Ser A:593 - Leu A:594	[ RasMol ]
		Ser A:642 - Ala A:643	[ RasMol ]
		Ser A:942 - Arg A:943	[ RasMol ]
		Thr A:778 - Leu A:779	[ RasMol ]
		Thr A:849 - Ile A:850	[ RasMol ]
		Thr A:938 - Val A:939	[ RasMol ]
		Thr A:989 - Lys A:990	[ RasMol ]
		Tyr A:739 - Asn A:740	[ RasMol ]
		Tyr A:831 - Asp A:832	[ RasMol ]
		Val A:1074 - Leu A:1075	[ RasMol ]
		Val A:939 - Gly A:940	[ RasMol ]

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Access by PDB/NDB ID
	5c52
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		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
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	DPOG1_HUMAN \| P54098
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	DPOG2_HUMAN \| Q9UHN1
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	2.7.7.7
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		Disease Information	:	OMIM

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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
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	DPOG1_HUMAN \| P54098
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UniProtKB/Swiss-Prot
	DPOG1_HUMAN \| P54098	:	3ikm 4ztu 4ztz 5c51 5c53
	DPOG2_HUMAN \| Q9UHN1	:	2g4c 3ikl 3ikm 4ztu 4ztz 5c51 5c53

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 4)

Sites (4, 4)

SS Bonds (0, 0)

Cis Peptide Bonds (46, 46)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (38, 49)

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