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(-) Description

Title :  POLYKETIDE CYCLASE OAC FROM CANNABIS SATIVA, Y72F MUTANT
 
Authors :  X. Yang, T. Matsui, T. Mori, I. Abe, H. Morita
Date :  28 Oct 15  (Deposition) - 27 Jan 16  (Release) - 06 Apr 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Cannabis Sativa, Plant Polyketide Cyclase, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Yang, T. Matsui, T. Kodama, T. Mori, X. Zhou, F. Taura, H. Noguchi, I. Abe, H. Morita
Structural Basis For Olivetolic Acid Formation By A Polyketide Cyclase From Cannabis Sativa
Febs J. V. 283 1088 2016
PubMed-ID: 26783002  |  Reference-DOI: 10.1111/FEBS.13654

(-) Compounds

Molecule 1 - OLIVETOLIC ACID CYCLASE
    Chains: A, B
    EC Number: 4.4.1.26
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE-80L
    Expression System Strain: M15
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: OAC
    Mutation: YES
    Organism Common: HEMP
    Organism Scientific: CANNABIS SATIVA
    Organism Taxid: 3483

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS B:5 , TYR B:27 , HIS B:78 , GLY B:82 , TRP B:89 , ILE B:94 , HOH B:319 , HOH B:324binding site for residue GOL B 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5B0F)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5B0F)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5B0F)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5B0F)

(-) Exons   (0, 0)

(no "Exon" information available for 5B0F)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:100
                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhhhhhhhhhhhh...eeeeeeee............eeeeeee.hhhhhhhhhhhhhhhhhhhhhh..eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 5b0f A   2 AVKHLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDVTQKNKEEGYTHIVEVTFESVETIQDFIIHPAHVGFGDVYRSFWEKLLIFDYTPRK 101
                                    11        21        31        41        51        61        71        81        91       101


Chain B from PDB  Type:PROTEIN  Length:100
                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhhhhhhhhhhhh...eeeeeeee.....hhhhh..eeeeeee.hhhhhhhhhhhhhhhhhhhhhh..eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 5b0f B   2 AVKHLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDVTQKNKEEGYTHIVEVTFESVETIQDFIIHPAHVGFGDVYRSFWEKLLIFDYTPRK 101
                                    11        21        31        41        51        61        71        81        91       101
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5B0F)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5B0F)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5B0F)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)

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  5b0f
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  OLIAC_CANSA | I6WU39
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        OLIAC_CANSA | I6WU39: 5b08 5b09 5b0a 5b0b 5b0c 5b0d 5b0e 5b0g

(-) Related Entries Specified in the PDB File

5b08 5b09 5b0a 5b0b 5b0c 5b0d 5b0e 5b0g