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(-) Description

Title :  POLYKETIDE CYCLASE OAC FROM CANNABIS SATIVA, I7F MUTANT
 
Authors :  X. Yang, T. Matsui, T. Mori, I. Abe, H. Morita
Date :  28 Oct 15  (Deposition) - 27 Jan 16  (Release) - 06 Apr 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.19
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,C  (1x)
Biol. Unit 2:  B,D  (1x)
Keywords :  Cannabis Sativa, Plant Polyketide Cyclase, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Yang, T. Matsui, T. Kodama, T. Mori, X. Zhou, F. Taura, H. Noguchi, I. Abe, H. Morita
Structural Basis For Olivetolic Acid Formation By A Polyketide Cyclase From Cannabis Sativa
Febs J. V. 283 1088 2016
PubMed-ID: 26783002  |  Reference-DOI: 10.1111/FEBS.13654

(-) Compounds

Molecule 1 - OLIVETOLIC ACID CYCLASE
    Chains: A, B, C, D
    EC Number: 4.4.1.26
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE-80L
    Expression System Strain: M15
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: OAC
    Mutation: YES
    Organism Common: HEMP
    Organism Scientific: CANNABIS SATIVA
    Organism Taxid: 3483

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A C 
Biological Unit 2 (1x):  B D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1ACT4Ligand/IonACETATE ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:5 , PHE A:7 , TYR A:72 , HIS A:78 , ILE A:94binding site for residue ACT A 201
2AC2SOFTWAREHIS B:5 , TYR B:72 , HIS B:78binding site for residue ACT B 201
3AC3SOFTWAREHIS C:5 , PHE C:7 , TYR C:72 , HIS C:78 , ILE C:94 , HOH C:318binding site for residue ACT C 201
4AC4SOFTWAREHIS D:5 , PHE D:7 , TYR D:72 , HIS D:78binding site for residue ACT D 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5B0B)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5B0B)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5B0B)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5B0B)

(-) Exons   (0, 0)

(no "Exon" information available for 5B0B)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:92
                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhhhhhhhhhhhh.....eeeeee....eeeeeee.hhhhhhhhhhhhhhhhhhhhhh..eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                 5b0b A   2 AVKHLFVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDGYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDYTPRK 101
                                    11        21        31        41   ||   59        69        79        89        99  
                                                                      45|                                               
                                                                       54                                               


Chain B from PDB  Type:PROTEIN  Length:92
                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhhhhhhhhhhhh.....eeeeee....eeeeeee.hhhhhhhhhhhhhhhhhhhhhh..eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                 5b0b B   2 AVKHLFVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDGYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDYTPRK 101
                                    11        21        31        41   ||   59        69        79        89        99  
                                                                      45|                                               
                                                                       54                                               


Chain C from PDB  Type:PROTEIN  Length:94
                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhhhhhhhhhhhh.....eeeeee......eeeeeee.hhhhhhhhhhhhhhhhhhhhhh..eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------- Transcript
                 5b0b C   2 AVKHLFVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDVTGYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDYTPRK 101
                                    11        21        31        41     || 57        67        77        87        97    
                                                                        47|                                               
                                                                         54                                               


Chain D from PDB  Type:PROTEIN  Length:94
                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhhhhhhhhhhhhh....eeeeee......eeeeeee.hhhhhhhhhhhhhhhhhhhhhh..eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------- Transcript
                 5b0b D   2 AVKHLFVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDVTGYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDYTPRK 101
                                    11        21        31        41     || 57        67        77        87        97    
                                                                        47|                                               
                                                                         54
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5B0B)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5B0B)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5B0B)

(-) Gene Ontology  (6, 6)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        OLIAC_CANSA | I6WU39: 5b08 5b09 5b0a 5b0c 5b0d 5b0e 5b0f 5b0g

(-) Related Entries Specified in the PDB File

5b08 5b09 5b0a 5b0b 5b0c 5b0d 5b0e 5b0g