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(-) Description

Title :  CATALYTIC DOMAIN OF CLOSTRIDIUM CELLULOVORANS EXGS
 
Authors :  Y. -C. Liaw
Date :  29 Jan 15  (Deposition) - 28 Oct 15  (Release) - 28 Oct 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. -C. Tsai, I. Amiraslanov, H. R. Chen, Y. W. Chen, H. L. Lee, P. H. Liang Y. -C. Liaw
Structures Of Exoglucanase From Clostridium Cellulovorans: Cellotetraose Binding And Cleavage
Acta Crystallogr. , Sect. F V. 71 1264 2015
PubMed-ID: 26457517  |  Reference-DOI: 10.1107/S2053230X15015915

(-) Compounds

Molecule 1 - EXOGLUCANASE S
    Chains: A
    EC Number: 3.2.1.91
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PHTPP13
    Expression System Strain: JM109
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: CATALYTIC DOMAIN, UNP RESIDUES 32-674
    Gene: EXGS
    Organism Scientific: CLOSTRIDIUM CELLULOVORANS
    Organism Taxid: 1493

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (8, 23)

Asymmetric/Biological Unit (8, 23)
No.NameCountTypeFull Name
11PE1Ligand/IonPENTAETHYLENE GLYCOL
2CA1Ligand/IonCALCIUM ION
3EDO8Ligand/Ion1,2-ETHANEDIOL
4P331Ligand/Ion3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL
5PEG5Ligand/IonDI(HYDROXYETHYL)ETHER
6PG42Ligand/IonTETRAETHYLENE GLYCOL
7PGE4Ligand/IonTRIETHYLENE GLYCOL
8SO41Ligand/IonSULFATE ION

(-) Sites  (23, 23)

Asymmetric Unit (23, 23)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLN A:442 , LYS A:451 , GLU A:484binding site for residue PEG A 701
02AC2SOFTWARETYR A:211 , ALA A:212 , THR A:213 , SER A:299binding site for residue PEG A 702
03AC3SOFTWAREALA A:379 , GLY A:380 , GLN A:461binding site for residue PEG A 703
04AC4SOFTWAREPRO A:-3 , VAL A:-2 , PRO A:0 , LYS A:64 , GLU A:240 , TRP A:241 , THR A:625 , HOH A:1020 , HOH A:1216binding site for residue PG4 A 704
05AC5SOFTWAREALA A:18 , ASN A:19 , GLY A:21 , HIS A:45 , TYR A:385 , GLY A:386 , THR A:466 , HOH A:817 , HOH A:900 , HOH A:911 , HOH A:1244binding site for residue P33 A 705
06AC6SOFTWAREPHE A:23 , ASP A:25 , GLY A:27 , TYR A:55 , LYS A:74 , GLY A:380 , HOH A:804 , HOH A:809binding site for residue PG4 A 706
07AC7SOFTWAREGLU A:80 , ILE A:84 , PRO A:85 , GLN A:143 , VAL A:144 , TYR A:145 , LYS A:254 , HOH A:1087binding site for residue PGE A 707
08AC8SOFTWARETRP A:302 , PGE A:709binding site for residue PGE A 708
09AC9SOFTWARELYS A:102 , ALA A:104 , THR A:105 , TYR A:267 , TRP A:304 , PGE A:708binding site for residue PGE A 709
10AD1SOFTWAREPHE A:173 , GLN A:174 , GLY A:176 , LYS A:216 , VAL A:394 , PGE A:712 , HOH A:1051binding site for residue 1PE A 710
11AD2SOFTWAREALA A:439 , VAL A:441 , GLN A:442 , TYR A:482 , SER A:573binding site for residue PEG A 711
12AD3SOFTWAREASN A:219 , ALA A:220 , TRP A:290 , TYR A:315 , TYR A:395 , 1PE A:710 , HOH A:1226binding site for residue PGE A 712
13AD4SOFTWARESER A:246binding site for residue PEG A 713
14AD5SOFTWAREGLN A:121 , PHE A:122 , GLY A:123binding site for residue EDO A 714
15AD6SOFTWARETHR A:327 , SER A:328 , ASP A:329binding site for residue EDO A 715
16AD7SOFTWAREHIS A:392 , GLU A:396 , GLU A:402binding site for residue EDO A 716
17AD8SOFTWAREHIS A:110 , SER A:118 , GLN A:119 , HOH A:953 , HOH A:1098binding site for residue EDO A 717
18AD9SOFTWAREASN A:97 , ASN A:301 , HOH A:805binding site for residue EDO A 718
19AE1SOFTWARETYR A:556 , SER A:559 , HOH A:1114binding site for residue EDO A 719
20AE2SOFTWARELYS A:427 , HOH A:833 , HOH A:855 , HOH A:1125binding site for residue EDO A 720
21AE3SOFTWARETYR A:419binding site for residue EDO A 721
22AE4SOFTWARELYS A:583 , GLN A:586 , HOH A:813binding site for residue SO4 A 722
23AE5SOFTWAREGLU A:26 , VAL A:153 , ASP A:154 , THR A:165binding site for residue CA A 723

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XWL)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Tyr A:116 -Pro A:117
2Asp A:397 -Pro A:398

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XWL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XWL)

(-) Exons   (0, 0)

(no "Exon" information available for 4XWL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:634
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhh........................eeehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.......hhhhhh...............hhhhh.ee...........hhhhhhhhhh.........eee...............eeee...............ee.ee.........hhhh.ee......eeeee.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh...............hhhhh........eeeee.....eeee...eee.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh........eee.hhhhh.........ee..eeee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee....eeeeeeeeeeee..............eeeeeeeee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh........eeee.hhhhhhh.........ee.....ee.........hhhhhhh.hhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xwl A  -4 APVVPNNEYVQHFKDMYAKIHNANNGYFSDEGIPYHAVETLMVEAPDYGHETTSEAFSYYMWLEAMNAKLTGDFSGFKKAWDVTEKYIIPGETDQPSASMSNYDPNKPATYAAEHPDPSMYPSQLQFGAAVGKDPLYNELKSTYGTSQVYGMHWLLDVDNWYGFGGATSTSPVYINTFQRGVQESCWETVPQPCKDEMKYGGRNGFLDLFTGDSQYATQFKYTNAPDADARAVQATYYAQLAAKEWGVDISSYVAKSTKMGDFLRYSFFDKYFRKVGNSTQAGTGYDSAQYLLNWYYAWGGGISSNWSWRIGSSHNHFGYQNPMAAWILSNTSDFKPKSPNAATDWNNSLKRQIEFYQWLQSAEGGIAGGASNSNGGSYQAWPAGTRTFYGMGYTPHPVYEDPGSNEWFGMQAWSMQRVAEYYYSSKDPAAKSLLDKWAKWACANVQFDDAAKKFKIPAKLVWTGQPDTWTGSYTGNSNLHVKVEAYGEDLGVAGSLSNALSYYAKALESSTDAADKVAYNTAKETSRKILDYLWASYQDDKGIAVTETRNDFKRFNQSVYIPSGWTGKMPNGDVIQSGATFLSIRSKYKQDPSWPNVEAALANGTGVDMTYHRFWGQSDIAIAFGTYGTLFTD 629
                                     5        15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XWL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XWL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XWL)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        O65986_CLOCL | O65986: 4kkf 4kkk 4xwm 4xwn

(-) Related Entries Specified in the PDB File

4xwm SAME PROTEIN COMPLEXED WITH CELLULOBIOSE
4xwn SAME PROTEIN COMPLEXED WITH CELLULOTETRALOSE