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(-) Description

Title :  COMPLEX STRUCTURE OF CATALYTIC DOMAIN OF CLOSTRIDIUM CELLULOVORANS EXGS AND CELLOBIOSE
 
Authors :  Y. -C. Liaw
Date :  29 Jan 15  (Deposition) - 28 Oct 15  (Release) - 28 Oct 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. -C. Tsai, I. Amiraslanov, H. R. Chen, Y. W. Chen, H. L. Lee, P. H. Liang Y. -C. Liaw
Structures Of Exoglucanase From Clostridium Cellulovorans: Cellotetraose Binding And Cleavage
Acta Crystallogr. , Sect. F V. 71 1264 2015
PubMed-ID: 26457517  |  Reference-DOI: 10.1107/S2053230X15015915

(-) Compounds

Molecule 1 - EXOGLUCANASE S
    Chains: A
    EC Number: 3.2.1.91
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PHTPP13
    Expression System Strain: JM109
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: CATALYTIC DOMAIN, UNP RESIDUES 32-674
    Gene: EXGS
    Organism Scientific: CLOSTRIDIUM CELLULOVORANS
    Organism Taxid: 1493

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 6)

Asymmetric/Biological Unit (4, 6)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION
2CBI2Ligand/IonCELLOBIOSE
3CBK1Ligand/Ion4-O-BETA-D-GLUCOPYRANOSYL-ALPHA-D-GLUCOPYRANOSE
4EDO1Ligand/Ion1,2-ETHANEDIOL

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:31 , GLU A:39 , GLU A:50 , TRP A:403 , TRP A:409 , ASP A:485 , ARG A:609 , TRP A:611 , HOH A:1062 , HOH A:1072 , HOH A:1171 , HOH A:1271 , HOH A:1334 , HOH A:1335 , HOH A:1363binding site for residue CBK A 701
2AC2SOFTWAREALA A:18 , ASN A:19 , GLY A:272 , GLY A:386 , HOH A:802 , HOH A:804 , HOH A:854binding site for residue EDO A 702
3AC3SOFTWARETRP A:149 , ASN A:171 , PHE A:173 , GLN A:174 , THR A:218 , ASN A:219 , TRP A:290 , TYR A:291 , TYR A:315 , TYR A:395 , HOH A:1001 , HOH A:1122 , HOH A:1220 , HOH A:1260 , HOH A:1273 , HOH A:1363binding site for residue CBI A 703
4AC4SOFTWAREALA A:104 , THR A:105 , THR A:206 , GLN A:214 , TRP A:304 , HOH A:1299 , HOH A:1344 , HOH A:1349 , HOH A:1392binding site for residue CBI A 704
5AC5SOFTWAREGLN A:178 , GLU A:183 , ASP A:397 , HOH A:1276 , HOH A:1386binding site for residue CA A 705
6AC6SOFTWAREGLU A:26 , VAL A:153 , ASP A:154 , THR A:165 , HOH A:901binding site for residue CA A 706

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XWM)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Tyr A:116 -Pro A:117
2Asp A:397 -Pro A:398

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XWM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XWM)

(-) Exons   (0, 0)

(no "Exon" information available for 4XWM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:630
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhh........................eeehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.......hhhhhh...............hhhhh.ee...........hhhhhhhhhh.........eee...............eeee...............ee.ee.........hhhh.ee......eeeee.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh...............hhhhh........eeeee.....eeee...eee.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh.........eee.hhhhh.........ee..eeee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee....eeeeeeeeeeee..............eeeeeeeee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh........eeeehhhhhhhh.........ee.....ee.........hhhhhhh.hhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4xwm A  -1 VPNNEYVQHFKDMYAKIHNANNGYFSDEGIPYHAVETLMVEAPDYGHETTSEAFSYYMWLEAMNAKLTGDFSGFKKAWDVTEKYIIPGETDQPSASMSNYDPNKPATYAAEHPDPSMYPSQLQFGAAVGKDPLYNELKSTYGTSQVYGMHWLLDVDNWYGFGGATSTSPVYINTFQRGVQESCWETVPQPCKDEMKYGGRNGFLDLFTGDSQYATQFKYTNAPDADARAVQATYYAQLAAKEWGVDISSYVAKSTKMGDFLRYSFFDKYFRKVGNSTQAGTGYDSAQYLLNWYYAWGGGISSNWSWRIGSSHNHFGYQNPMAAWILSNTSDFKPKSPNAATDWNNSLKRQIEFYQWLQSAEGGIAGGASNSNGGSYQAWPAGTRTFYGMGYTPHPVYEDPGSNEWFGMQAWSMQRVAEYYYSSKDPAAKSLLDKWAKWACANVQFDDAAKKFKIPAKLVWTGQPDTWTGSYTGNSNLHVKVEAYGEDLGVAGSLSNALSYYAKALESSTDAADKVAYNTAKETSRKILDYLWASYQDDKGIAVTETRNDFKRFNQSVYIPSGWTGKMPNGDVIQSGATFLSIRSKYKQDPSWPNVEAALANGTGVDMTYHRFWGQSDIAIAFGTYGTLFT 628
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XWM)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XWM)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XWM)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Asp A:397 - Pro A:398   [ RasMol ]  
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  3.2.1.91
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        O65986_CLOCL | O65986: 4kkf 4kkk 4xwl 4xwn

(-) Related Entries Specified in the PDB File

4xwl 4xwn